RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.97□□□□□ -0.33
COL4A5-206ENST00000489230 SFMBT1Q9UHJ3 866 aa12.97□□□□□ -0.33
COL4A5-206ENST00000489230 MYO10Q9HD67 2058 aa12.97□□□□□ -0.33
COL4A5-206ENST00000489230 GOLGA8SH3BPF8 625 aa12.96□□□□□ -0.33
COL4A5-206ENST00000489230 NARSO43776 548 aaKnown RBP12.96□□□□□ -0.33
COL4A5-206ENST00000489230 AKR1B10O60218 316 aa12.96□□□□□ -0.33
COL4A5-206ENST00000489230 DAB1O75553 588 aa12.96□□□□□ -0.33
COL4A5-206ENST00000489230 STC2O76061 302 aa12.96□□□□□ -0.33
COL4A5-206ENST00000489230 TRUB2O95900 331 aaKnown RBP12.96□□□□□ -0.33
COL4A5-206ENST00000489230 ADH1CP00326 375 aa12.96□□□□□ -0.33
COL4A5-206ENST00000489230 IRF1P10914 325 aa12.96□□□□□ -0.33
COL4A5-206ENST00000489230 EIF4A3P38919 411 aaKnown RBP12.96□□□□□ -0.33
COL4A5-206ENST00000489230 PTP4A2Q12974 167 aa12.96□□□□□ -0.33
COL4A5-206ENST00000489230 TAF5Q15542 800 aa12.96□□□□□ -0.33
COL4A5-206ENST00000489230 EML3Q32P44 896 aa12.96□□□□□ -0.33
COL4A5-206ENST00000489230 SLC25A52Q3SY17 297 aa12.96□□□□□ -0.33
COL4A5-206ENST00000489230 C10orf76Q5T2E6 689 aa12.96□□□□□ -0.33
COL4A5-206ENST00000489230 SYPL2Q5VXT5 272 aa12.96□□□□□ -0.33
COL4A5-206ENST00000489230 E4F1Q66K89 784 aaPredicted RBP12.96□□□□□ -0.33
COL4A5-206ENST00000489230 DNAJC24Q6P3W2 148 aa12.96□□□□□ -0.33
COL4A5-206ENST00000489230 ZNF852Q6ZMS4 543 aa12.96□□□□□ -0.33
COL4A5-206ENST00000489230 MON1BQ7L1V2 547 aa12.96□□□□□ -0.33
COL4A5-206ENST00000489230 RALGPS2Q86X27 583 aaPredicted RBP12.96□□□□□ -0.33
COL4A5-206ENST00000489230 C3orf20Q8ND61 904 aa12.96□□□□□ -0.33
COL4A5-206ENST00000489230 DQX1Q8TE96 717 aaKnown RBP12.96□□□□□ -0.33
COL4A5-206ENST00000489230 RNF34Q969K3 372 aa12.96□□□□□ -0.33
COL4A5-206ENST00000489230 PANX2Q96RD6 677 aa12.96□□□□□ -0.33
COL4A5-206ENST00000489230 DDX23Q9BUQ8 820 aaKnown RBP12.96□□□□□ -0.33
COL4A5-206ENST00000489230 LINC00597Q9H2U6 94 aa12.96□□□□□ -0.33
COL4A5-206ENST00000489230 ECT2Q9H8V3 914 aa12.96□□□□□ -0.33
COL4A5-206ENST00000489230 TJP2Q9UDY2 1190 aa12.96□□□□□ -0.33
COL4A5-206ENST00000489230 TMEM59LQ9UK28 342 aa12.96□□□□□ -0.33
COL4A5-206ENST00000489230 PATJQ8NI35 1801 aa12.96□□□□□ -0.33
COL4A5-206ENST00000489230 DENND4CQ5VZ89 1909 aa12.96□□□□□ -0.34
COL4A5-206ENST00000489230 TMCO5BA8MYB1 307 aa12.95□□□□□ -0.34
COL4A5-206ENST00000489230 ARNTLO00327 626 aa12.95□□□□□ -0.34
COL4A5-206ENST00000489230 STK25O00506 426 aa12.95□□□□□ -0.34
COL4A5-206ENST00000489230 MDM4O15151 490 aa12.95□□□□□ -0.34
COL4A5-206ENST00000489230 NCAM2O15394 837 aa12.95□□□□□ -0.34
COL4A5-206ENST00000489230 GRAP2O75791 330 aa12.95□□□□□ -0.34
COL4A5-206ENST00000489230 APOEP02649 317 aa12.95□□□□□ -0.34
COL4A5-206ENST00000489230 HMBSP08397 361 aa12.95□□□□□ -0.34
COL4A5-206ENST00000489230 PDGFRAP16234 1089 aa12.95□□□□□ -0.34
COL4A5-206ENST00000489230 ABCB4P21439 1286 aa12.95□□□□□ -0.34
COL4A5-206ENST00000489230 SDC4P31431 198 aa12.95□□□□□ -0.34
COL4A5-206ENST00000489230 CCR1P32246 355 aa12.95□□□□□ -0.34
COL4A5-206ENST00000489230 STARD6P59095 220 aa12.95□□□□□ -0.34
COL4A5-206ENST00000489230 GAD2Q05329 585 aa12.95□□□□□ -0.34
COL4A5-206ENST00000489230 MLF2Q15773 248 aaPredicted RBP12.95□□□□□ -0.34
COL4A5-206ENST00000489230 SLC18A3Q16572 532 aa12.95□□□□□ -0.34
COL4A5-206ENST00000489230 CCDC122Q5T0U0 273 aa12.95□□□□□ -0.34
COL4A5-206ENST00000489230 ALKBH5Q6P6C2 394 aaKnown RBP12.95□□□□□ -0.34
COL4A5-206ENST00000489230 DCUN1D2Q6PH85 259 aa12.95□□□□□ -0.34
COL4A5-206ENST00000489230 WDR59Q6PJI9 974 aa12.95□□□□□ -0.34
COL4A5-206ENST00000489230 NUDT18Q6ZVK8 323 aa12.95□□□□□ -0.34
COL4A5-206ENST00000489230 ERMP1Q7Z2K6 904 aa12.95□□□□□ -0.34
COL4A5-206ENST00000489230 FLCNQ8NFG4 579 aa12.95□□□□□ -0.34
COL4A5-206ENST00000489230 CCDC26Q8TAB7 109 aa12.95□□□□□ -0.34
COL4A5-206ENST00000489230 ANP32BQ92688 251 aaKnown RBP12.95□□□□□ -0.34
COL4A5-206ENST00000489230 NT5C3BQ969T7 300 aa12.95□□□□□ -0.34
COL4A5-206ENST00000489230 PGAP3Q96FM1 320 aaPredicted RBP12.95□□□□□ -0.34
COL4A5-206ENST00000489230 ZFYVE19Q96K21 471 aa12.95□□□□□ -0.34
COL4A5-206ENST00000489230 NCAPGQ9BPX3 1015 aa12.95□□□□□ -0.34
COL4A5-206ENST00000489230 EBF3Q9H4W6 596 aa12.95□□□□□ -0.34
COL4A5-206ENST00000489230 FAM204AQ9H8W3 233 aa12.95□□□□□ -0.34
COL4A5-206ENST00000489230 NHEJ1Q9H9Q4 299 aaPredicted RBP12.95□□□□□ -0.34
COL4A5-206ENST00000489230 ARHGEF3Q9NR81 526 aa12.95□□□□□ -0.34
COL4A5-206ENST00000489230 ARHGAP20Q9P2F6 1191 aa12.95□□□□□ -0.34
COL4A5-206ENST00000489230 AGO1Q9UL18 857 aaKnown RBP12.95□□□□□ -0.34
COL4A5-206ENST00000489230 WNT6Q9Y6F9 365 aa12.95□□□□□ -0.34
COL4A5-206ENST00000489230 SCINQ9Y6U3 715 aa12.95□□□□□ -0.34
COL4A5-206ENST00000489230 ANAPC1Q9H1A4 1944 aa12.94□□□□□ -0.34
COL4A5-206ENST00000489230 M0QYT0 321 aa12.94□□□□□ -0.34
COL4A5-206ENST00000489230 IRAK2O43187 625 aa12.94□□□□□ -0.34
COL4A5-206ENST00000489230 GREM1O60565 184 aa12.94□□□□□ -0.34
COL4A5-206ENST00000489230 IGLV3-25P01717 112 aa12.94□□□□□ -0.34
COL4A5-206ENST00000489230 IGLV3-27P01718 113 aa12.94□□□□□ -0.34
COL4A5-206ENST00000489230 CYBBP04839 570 aa12.94□□□□□ -0.34
COL4A5-206ENST00000489230 CORO1AP31146 461 aaKnown RBP12.94□□□□□ -0.34
COL4A5-206ENST00000489230 ID4P47928 161 aa12.94□□□□□ -0.34
COL4A5-206ENST00000489230 CLCN5P51795 746 aa12.94□□□□□ -0.34
COL4A5-206ENST00000489230 PPP2R5DQ14738 602 aa12.94□□□□□ -0.34
COL4A5-206ENST00000489230 DHCR24Q15392 516 aa12.94□□□□□ -0.34
COL4A5-206ENST00000489230 C2CD6Q53TS8 623 aa12.94□□□□□ -0.34
COL4A5-206ENST00000489230 ADGRF1Q5T601 910 aa12.94□□□□□ -0.34
COL4A5-206ENST00000489230 Q6ZNB5 142 aa12.94□□□□□ -0.34
COL4A5-206ENST00000489230 TMTC1Q8IUR5 882 aa12.94□□□□□ -0.34
COL4A5-206ENST00000489230 DENND1CQ8IV53 801 aa12.94□□□□□ -0.34
COL4A5-206ENST00000489230 BBS7Q8IWZ6 715 aa12.94□□□□□ -0.34
COL4A5-206ENST00000489230 CCDC170Q8IYT3 715 aa12.94□□□□□ -0.34
COL4A5-206ENST00000489230 SIX5Q8N196 739 aa12.94□□□□□ -0.34
COL4A5-206ENST00000489230 CPXM2Q8N436 756 aa12.94□□□□□ -0.34
COL4A5-206ENST00000489230 ATP6V0D2Q8N8Y2 350 aa12.94□□□□□ -0.34
COL4A5-206ENST00000489230 TC2NQ8N9U0 490 aa12.94□□□□□ -0.34
COL4A5-206ENST00000489230 SLC39A13Q96H72 371 aa12.94□□□□□ -0.34
COL4A5-206ENST00000489230 BTN2A3PQ96KV6 586 aa12.94□□□□□ -0.34
COL4A5-206ENST00000489230 NPY6RQ99463 290 aa12.94□□□□□ -0.34
COL4A5-206ENST00000489230 OSBPL6Q9BZF3 934 aa12.94□□□□□ -0.34
COL4A5-206ENST00000489230 WDCPQ9H6R7 721 aa12.94□□□□□ -0.34
COL4A5-206ENST00000489230 LUC7LQ9NQ29 371 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms