RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 HIDE1A8MVS5 230 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 APOC4-APOC2K7ER74 178 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 EEF2KO00418 725 aaKnown RBP10.39□□□□□ -0.75
USP11-211ENST00000489111 MCF2LO15068 1137 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 GRM6O15303 877 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 DAPK3O43293 454 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 CREB3O43889 395 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 TLR5O60602 858 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 HEXIM1O94992 359 aaKnown RBP10.39□□□□□ -0.75
USP11-211ENST00000489111 ECEL1O95672 775 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 APOC2P02655 101 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 C8AP07357 584 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 ZDHHC11BP0C7U3 371 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 SPATA31D3P0C874 917 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 COILP38432 576 aaPredicted RBP10.39□□□□□ -0.75
USP11-211ENST00000489111 PPP3CCP48454 512 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 KPNA1P52294 538 aaPredicted RBP10.39□□□□□ -0.75
USP11-211ENST00000489111 ZNF135P52742 658 aaPredicted RBP10.39□□□□□ -0.75
USP11-211ENST00000489111 TBX4P57082 545 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 TPI1P60174 286 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 ERVK-21P61565 698 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 MRPS25P82663 173 aaKnown RBP10.39□□□□□ -0.75
USP11-211ENST00000489111 SLC7A5Q01650 507 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 LMNB2Q03252 620 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 NNTQ13423 1086 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 GPM6BQ13491 265 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 TRIP4Q15650 581 aaPredicted RBP10.39□□□□□ -0.75
USP11-211ENST00000489111 CCNG2Q16589 344 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 ANKRD20A8PQ5CZ79 823 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 PPP2R2DQ66LE6 453 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 PDE12Q6L8Q7 609 aaKnown RBP10.39□□□□□ -0.75
USP11-211ENST00000489111 ELMSAN1Q6PJG2 1045 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 SPATA31D4Q6ZUB0 917 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 MIB1Q86YT6 1006 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 FAM71BQ8TC56 605 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 PSMG2Q969U7 264 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 MYRFLQ96LU7 910 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 CSPG4P5Q96PW8 444 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 RNF157Q96PX1 679 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 GCNAQ96QF7 691 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 PARD6BQ9BYG5 372 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 TKTL2Q9H0I9 626 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 RAB17Q9H0T7 212 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 EPC1Q9H2F5 836 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 LRRC19Q9H756 370 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 PRDM16Q9HAZ2 1276 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 SFMBT1Q9UHJ3 866 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 NUDT5Q9UKK9 219 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 TLR6Q9Y2C9 796 aa10.39□□□□□ -0.75
USP11-211ENST00000489111 R3HDM2Q9Y2K5 976 aaKnown RBP10.39□□□□□ -0.75
USP11-211ENST00000489111 YBX2Q9Y2T7 364 aaKnown RBP10.39□□□□□ -0.75
USP11-211ENST00000489111 UTP11Q9Y3A2 253 aaKnown RBP10.39□□□□□ -0.75
USP11-211ENST00000489111 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.38□□□□□ -0.75
USP11-211ENST00000489111 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.38□□□□□ -0.75
USP11-211ENST00000489111 SLC12A8A0AV02 714 aa10.38□□□□□ -0.75
USP11-211ENST00000489111 ZNF840PA6NDX5 716 aa10.38□□□□□ -0.75
USP11-211ENST00000489111 SPDYE4A6NLX3 237 aa10.38□□□□□ -0.75
USP11-211ENST00000489111 TTI1O43156 1089 aa10.38□□□□□ -0.75
USP11-211ENST00000489111 LIASO43766 372 aa10.38□□□□□ -0.75
USP11-211ENST00000489111 ERLIN1O75477 346 aa10.38□□□□□ -0.75
USP11-211ENST00000489111 MOCS2O96007 188 aaPredicted RBP10.38□□□□□ -0.75
USP11-211ENST00000489111 HMGA1P17096 107 aaKnown RBP10.38□□□□□ -0.75
USP11-211ENST00000489111 GOT1P17174 413 aa10.38□□□□□ -0.75
USP11-211ENST00000489111 TGM2P21980 687 aa10.38□□□□□ -0.75
USP11-211ENST00000489111 DNAJB1P25685 340 aa10.38□□□□□ -0.75
USP11-211ENST00000489111 TUBP50607 506 aa10.38□□□□□ -0.75
USP11-211ENST00000489111 GUCY2DQ02846 1103 aa10.38□□□□□ -0.75
USP11-211ENST00000489111 ADCY2Q08462 1091 aa10.38□□□□□ -0.75
USP11-211ENST00000489111 BYSLQ13895 437 aaKnown RBP10.38□□□□□ -0.75
USP11-211ENST00000489111 PPP2R5DQ14738 602 aa10.38□□□□□ -0.75
USP11-211ENST00000489111 PPP1R7Q15435 360 aa10.38□□□□□ -0.75
USP11-211ENST00000489111 PPM1LQ5SGD2 360 aa10.38□□□□□ -0.75
USP11-211ENST00000489111 HECTD3Q5T447 861 aa10.38□□□□□ -0.75
USP11-211ENST00000489111 TTC27Q6P3X3 843 aa10.38□□□□□ -0.75
USP11-211ENST00000489111 RFX8Q6ZV50 586 aa10.38□□□□□ -0.75
USP11-211ENST00000489111 SYDE1Q6ZW31 735 aaPredicted RBP10.38□□□□□ -0.75
USP11-211ENST00000489111 GSTA5Q7RTV2 222 aa10.38□□□□□ -0.75
USP11-211ENST00000489111 SPRED2Q7Z698 418 aa10.38□□□□□ -0.75
USP11-211ENST00000489111 DNAJB7Q7Z6W7 309 aaPredicted RBP10.38□□□□□ -0.75
USP11-211ENST00000489111 JAMLQ86YT9 394 aa10.38□□□□□ -0.75
USP11-211ENST00000489111 IFT20Q8IY31 132 aa10.38□□□□□ -0.75
USP11-211ENST00000489111 ZDHHC14Q8IZN3 488 aa10.38□□□□□ -0.75
USP11-211ENST00000489111 PYROXD2Q8N2H3 581 aa10.38□□□□□ -0.75
USP11-211ENST00000489111 ACTL9Q8TC94 416 aa10.38□□□□□ -0.75
USP11-211ENST00000489111 P3H4Q92791 437 aa10.38□□□□□ -0.75
USP11-211ENST00000489111 FAF2Q96CS3 445 aa10.38□□□□□ -0.75
USP11-211ENST00000489111 PNKPQ96T60 521 aa10.38□□□□□ -0.75
USP11-211ENST00000489111 GDF15Q99988 308 aa10.38□□□□□ -0.75
USP11-211ENST00000489111 FAM118BQ9BPY3 351 aa10.38□□□□□ -0.75
USP11-211ENST00000489111 NKX2-4Q9H2Z4 354 aa10.38□□□□□ -0.75
USP11-211ENST00000489111 PLEKHA4Q9H4M7 779 aa10.38□□□□□ -0.75
USP11-211ENST00000489111 CCSER2Q9H7U1 834 aa10.38□□□□□ -0.75
USP11-211ENST00000489111 TMPRSS4Q9NRS4 437 aa10.38□□□□□ -0.75
USP11-211ENST00000489111 MTMR10Q9NXD2 777 aa10.38□□□□□ -0.75
USP11-211ENST00000489111 ARHGEF38Q9NXL2 777 aa10.38□□□□□ -0.75
USP11-211ENST00000489111 PCYOX1Q9UHG3 505 aa10.38□□□□□ -0.75
USP11-211ENST00000489111 DPP7Q9UHL4 492 aa10.38□□□□□ -0.75
USP11-211ENST00000489111 SLC12A6Q9UHW9 1150 aa10.38□□□□□ -0.75
USP11-211ENST00000489111 DNMT3LQ9UJW3 386 aa10.38□□□□□ -0.75
USP11-211ENST00000489111 VWA8A3KMH1 1905 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms