RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 GANQ9H2C0 597 aa14.89□□□□□ -0.03
BRCA1-218ENST00000489037 NLRC4Q9NPP4 1024 aa14.89□□□□□ -0.03
BRCA1-218ENST00000489037 CYTH4Q9UIA0 394 aa14.89□□□□□ -0.03
BRCA1-218ENST00000489037 SPAG17Q6Q759 2223 aa14.89□□□□□ -0.03
BRCA1-218ENST00000489037 SYCE3A1L190 88 aa14.88□□□□□ -0.03
BRCA1-218ENST00000489037 PRR23AA6NEV1 266 aa14.88□□□□□ -0.03
BRCA1-218ENST00000489037 K7ESF4 209 aa14.88□□□□□ -0.03
BRCA1-218ENST00000489037 MSI1O43347 362 aaKnown RBP14.88□□□□□ -0.03
BRCA1-218ENST00000489037 GFPT2O94808 682 aa14.88□□□□□ -0.03
BRCA1-218ENST00000489037 TDGF1P13385 188 aa14.88□□□□□ -0.03
BRCA1-218ENST00000489037 TIE1P35590 1138 aa14.88□□□□□ -0.03
BRCA1-218ENST00000489037 SOX5P35711 763 aa14.88□□□□□ -0.03
BRCA1-218ENST00000489037 FNTBP49356 437 aa14.88□□□□□ -0.03
BRCA1-218ENST00000489037 KLK7P49862 253 aa14.88□□□□□ -0.03
BRCA1-218ENST00000489037 RING1Q06587 406 aa14.88□□□□□ -0.03
BRCA1-218ENST00000489037 NNTQ13423 1086 aa14.88□□□□□ -0.03
BRCA1-218ENST00000489037 E2F5Q15329 346 aa14.88□□□□□ -0.03
BRCA1-218ENST00000489037 MPPE1Q53F39 396 aa14.88□□□□□ -0.03
BRCA1-218ENST00000489037 EOGTQ5NDL2 527 aa14.88□□□□□ -0.03
BRCA1-218ENST00000489037 C10orf76Q5T2E6 689 aa14.88□□□□□ -0.03
BRCA1-218ENST00000489037 ADGRF1Q5T601 910 aa14.88□□□□□ -0.03
BRCA1-218ENST00000489037 TAF3Q5VWG9 929 aa14.88□□□□□ -0.03
BRCA1-218ENST00000489037 SDE2Q6IQ49 451 aa14.88□□□□□ -0.03
BRCA1-218ENST00000489037 PKN3Q6P5Z2 889 aa14.88□□□□□ -0.03
BRCA1-218ENST00000489037 CACNA2D4Q7Z3S7 1137 aa14.88□□□□□ -0.03
BRCA1-218ENST00000489037 ZDHHC17Q8IUH5 632 aa14.88□□□□□ -0.03
BRCA1-218ENST00000489037 WDTC1Q8N5D0 677 aa14.88□□□□□ -0.03
BRCA1-218ENST00000489037 TERB1Q8NA31 727 aa14.88□□□□□ -0.03
BRCA1-218ENST00000489037 KCNV2Q8TDN2 545 aa14.88□□□□□ -0.03
BRCA1-218ENST00000489037 EZH1Q92800 747 aaPredicted RBP14.88□□□□□ -0.03
BRCA1-218ENST00000489037 ERGIC2Q96RQ1 377 aa14.88□□□□□ -0.03
BRCA1-218ENST00000489037 CPXM1Q96SM3 734 aa14.88□□□□□ -0.03
BRCA1-218ENST00000489037 ASNSD1Q9NWL6 643 aa14.88□□□□□ -0.03
BRCA1-218ENST00000489037 PLK2Q9NYY3 685 aa14.88□□□□□ -0.03
BRCA1-218ENST00000489037 SLC12A6Q9UHW9 1150 aa14.88□□□□□ -0.03
BRCA1-218ENST00000489037 NAALADL1Q9UQQ1 740 aa14.88□□□□□ -0.03
BRCA1-218ENST00000489037 TLR6Q9Y2C9 796 aa14.88□□□□□ -0.03
BRCA1-218ENST00000489037 SIK3Q9Y2K2 1263 aa14.88□□□□□ -0.03
BRCA1-218ENST00000489037 ZFHX2Q9C0A1 2572 aaPredicted RBP14.88□□□□□ -0.03
BRCA1-218ENST00000489037 CCDC163A0A0D9SF12 145 aa14.87□□□□□ -0.03
BRCA1-218ENST00000489037 TYW5A2RUC4 315 aaKnown RBP14.87□□□□□ -0.03
BRCA1-218ENST00000489037 LILRB5O75023 590 aa14.87□□□□□ -0.03
BRCA1-218ENST00000489037 HSF2BPO75031 334 aa14.87□□□□□ -0.03
BRCA1-218ENST00000489037 ALDH1A2O94788 518 aa14.87□□□□□ -0.03
BRCA1-218ENST00000489037 KLF8O95600 359 aaPredicted RBP14.87□□□□□ -0.03
BRCA1-218ENST00000489037 APBB3O95704 486 aa14.87□□□□□ -0.03
BRCA1-218ENST00000489037 LSM8O95777 96 aaKnown RBP14.87□□□□□ -0.03
BRCA1-218ENST00000489037 CAVIN2O95810 425 aa14.87□□□□□ -0.03
BRCA1-218ENST00000489037 APOEP02649 317 aa14.87□□□□□ -0.03
BRCA1-218ENST00000489037 GBP1P32455 592 aa14.87□□□□□ -0.03
BRCA1-218ENST00000489037 CDK17Q00537 523 aa14.87□□□□□ -0.03
BRCA1-218ENST00000489037 ASCL5Q7RTU5 278 aa14.87□□□□□ -0.03
BRCA1-218ENST00000489037 WDR5BQ86VZ2 330 aa14.87□□□□□ -0.03
BRCA1-218ENST00000489037 ERICH1Q86X53 443 aa14.87□□□□□ -0.03
BRCA1-218ENST00000489037 DHX40Q8IX18 779 aaKnown RBP14.87□□□□□ -0.03
BRCA1-218ENST00000489037 CCDC33Q8N5R6 958 aa14.87□□□□□ -0.03
BRCA1-218ENST00000489037 TSTD1Q8NFU3 115 aa14.87□□□□□ -0.03
BRCA1-218ENST00000489037 DQX1Q8TE96 717 aaKnown RBP14.87□□□□□ -0.03
BRCA1-218ENST00000489037 AZIN2Q96A70 460 aa14.87□□□□□ -0.03
BRCA1-218ENST00000489037 TMA16Q96EY4 203 aaKnown RBP14.87□□□□□ -0.03
BRCA1-218ENST00000489037 HINFPQ9BQA5 517 aa14.87□□□□□ -0.03
BRCA1-218ENST00000489037 IRX2Q9BZI1 471 aaPredicted RBP14.87□□□□□ -0.03
BRCA1-218ENST00000489037 MMP17Q9ULZ9 603 aa14.87□□□□□ -0.03
BRCA1-218ENST00000489037 RALGAPA1Q6GYQ0 2036 aa14.87□□□□□ -0.03
BRCA1-218ENST00000489037 GOLGA6L19H0YKK7 550 aa14.86□□□□□ -0.03
BRCA1-218ENST00000489037 ZBTB24O43167 697 aaPredicted RBP14.86□□□□□ -0.03
BRCA1-218ENST00000489037 ACSL4O60488 711 aa14.86□□□□□ -0.03
BRCA1-218ENST00000489037 TSPAN3O60637 253 aa14.86□□□□□ -0.03
BRCA1-218ENST00000489037 SERPINC1P01008 464 aa14.86□□□□□ -0.03
BRCA1-218ENST00000489037 PENKP01210 267 aaPredicted RBP14.86□□□□□ -0.03
BRCA1-218ENST00000489037 FYNP06241 537 aa14.86□□□□□ -0.03
BRCA1-218ENST00000489037 CCDC172P0C7W6 258 aa14.86□□□□□ -0.03
BRCA1-218ENST00000489037 ATP1A3P13637 1013 aa14.86□□□□□ -0.03
BRCA1-218ENST00000489037 DGKEP52429 567 aa14.86□□□□□ -0.03
BRCA1-218ENST00000489037 SLC6A3Q01959 620 aa14.86□□□□□ -0.03
BRCA1-218ENST00000489037 DCAF6Q58WW2 860 aa14.86□□□□□ -0.03
BRCA1-218ENST00000489037 FYB2Q5VWT5 728 aa14.86□□□□□ -0.03
BRCA1-218ENST00000489037 FAM183BPQ6ZVS7 135 aa14.86□□□□□ -0.03
BRCA1-218ENST00000489037 CEP68Q76N32 757 aa14.86□□□□□ -0.03
BRCA1-218ENST00000489037 NOP9Q86U38 636 aaKnown RBP14.86□□□□□ -0.03
BRCA1-218ENST00000489037 CCDC117Q8IWD4 279 aaPredicted RBP14.86□□□□□ -0.03
BRCA1-218ENST00000489037 FAM217AQ8IXS0 508 aa14.86□□□□□ -0.03
BRCA1-218ENST00000489037 PHTF2Q8N3S3 785 aa14.86□□□□□ -0.03
BRCA1-218ENST00000489037 ALLCQ8N6M5 410 aa14.86□□□□□ -0.03
BRCA1-218ENST00000489037 ZNF513Q8N8E2 541 aaPredicted RBP14.86□□□□□ -0.03
BRCA1-218ENST00000489037 TXNDC5Q8NBS9 432 aaKnown RBP14.86□□□□□ -0.03
BRCA1-218ENST00000489037 UCMAQ8WVF2 138 aa14.86□□□□□ -0.03
BRCA1-218ENST00000489037 RNF34Q969K3 372 aa14.86□□□□□ -0.03
BRCA1-218ENST00000489037 C18orf8Q96DM3 657 aa14.86□□□□□ -0.03
BRCA1-218ENST00000489037 HHIPQ96QV1 700 aa14.86□□□□□ -0.03
BRCA1-218ENST00000489037 SLC2A11Q9BYW1 496 aa14.86□□□□□ -0.03
BRCA1-218ENST00000489037 HSD3B7Q9H2F3 369 aa14.86□□□□□ -0.03
BRCA1-218ENST00000489037 FAM204AQ9H8W3 233 aa14.86□□□□□ -0.03
BRCA1-218ENST00000489037 POLMQ9NP87 494 aaPredicted RBP14.86□□□□□ -0.03
BRCA1-218ENST00000489037 C2orf42Q9NWW7 574 aa14.86□□□□□ -0.03
BRCA1-218ENST00000489037 STOML2Q9UJZ1 356 aa14.86□□□□□ -0.03
BRCA1-218ENST00000489037 AXIN1O15169 862 aa14.85□□□□□ -0.03
BRCA1-218ENST00000489037 IRAK2O43187 625 aa14.85□□□□□ -0.03
BRCA1-218ENST00000489037 TRUB2O95900 331 aaKnown RBP14.85□□□□□ -0.03
BRCA1-218ENST00000489037 IGLV3-27P01718 113 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms