RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 CPXM1Q96SM3 734 aa8.16□□□□□ -1.1
MACF1-220ENST00000485063 PNKPQ96T60 521 aa8.16□□□□□ -1.1
MACF1-220ENST00000485063 DDX50Q9BQ39 737 aaKnown RBP8.16□□□□□ -1.1
MACF1-220ENST00000485063 BBS2Q9BXC9 721 aa8.16□□□□□ -1.1
MACF1-220ENST00000485063 SEPT11Q9NVA2 429 aaKnown RBP8.16□□□□□ -1.1
MACF1-220ENST00000485063 ASNSD1Q9NWL6 643 aa8.16□□□□□ -1.1
MACF1-220ENST00000485063 WDR35Q9P2L0 1181 aa8.16□□□□□ -1.1
MACF1-220ENST00000485063 SFMBT1Q9UHJ3 866 aa8.16□□□□□ -1.1
MACF1-220ENST00000485063 SLC12A6Q9UHW9 1150 aa8.16□□□□□ -1.1
MACF1-220ENST00000485063 BDP1A6H8Y1 2624 aa8.16□□□□□ -1.1
MACF1-220ENST00000485063 OTOL1A6NHN0 477 aaPredicted RBP8.15□□□□□ -1.1
MACF1-220ENST00000485063 NEDD8-MDP1E9PL57 170 aa8.15□□□□□ -1.1
MACF1-220ENST00000485063 EPHB6O15197 1021 aa8.15□□□□□ -1.1
MACF1-220ENST00000485063 PAPSS1O43252 624 aaPredicted RBP8.15□□□□□ -1.1
MACF1-220ENST00000485063 HSF2BPO75031 334 aa8.15□□□□□ -1.1
MACF1-220ENST00000485063 LATS1O95835 1130 aa8.15□□□□□ -1.1
MACF1-220ENST00000485063 APOEP02649 317 aa8.15□□□□□ -1.1
MACF1-220ENST00000485063 APODP05090 189 aa8.15□□□□□ -1.1
MACF1-220ENST00000485063 CDH5P33151 784 aaPredicted RBP8.15□□□□□ -1.1
MACF1-220ENST00000485063 NSFP46459 744 aaKnown RBP8.15□□□□□ -1.1
MACF1-220ENST00000485063 SLC11A2P49281 568 aa8.15□□□□□ -1.1
MACF1-220ENST00000485063 CCR3P51677 355 aa8.15□□□□□ -1.1
MACF1-220ENST00000485063 TBX4P57082 545 aa8.15□□□□□ -1.1
MACF1-220ENST00000485063 CDK17Q00537 523 aa8.15□□□□□ -1.1
MACF1-220ENST00000485063 SLC6A3Q01959 620 aa8.15□□□□□ -1.1
MACF1-220ENST00000485063 RING1Q06587 406 aa8.15□□□□□ -1.1
MACF1-220ENST00000485063 MTA1Q13330 715 aa8.15□□□□□ -1.1
MACF1-220ENST00000485063 NNTQ13423 1086 aa8.15□□□□□ -1.1
MACF1-220ENST00000485063 ANGPT1Q15389 498 aa8.15□□□□□ -1.1
MACF1-220ENST00000485063 TRIP4Q15650 581 aaPredicted RBP8.15□□□□□ -1.1
MACF1-220ENST00000485063 DCAF6Q58WW2 860 aa8.15□□□□□ -1.1
MACF1-220ENST00000485063 PPP1R2P3Q6NXS1 205 aa8.15□□□□□ -1.1
MACF1-220ENST00000485063 Q6ZNB5 142 aa8.15□□□□□ -1.1
MACF1-220ENST00000485063 TPGS1Q6ZTW0 290 aa8.15□□□□□ -1.1
MACF1-220ENST00000485063 FAM183BPQ6ZVS7 135 aa8.15□□□□□ -1.1
MACF1-220ENST00000485063 SND1Q7KZF4 910 aaKnown RBP eCLIP8.15□□□□□ -1.1
MACF1-220ENST00000485063 DDX1Q92499 740 aaKnown RBP8.15□□□□□ -1.1
MACF1-220ENST00000485063 ATOH1Q92858 354 aaPredicted RBP8.15□□□□□ -1.1
MACF1-220ENST00000485063 CHFRQ96EP1 664 aa8.15□□□□□ -1.1
MACF1-220ENST00000485063 NAP1L5Q96NT1 182 aaPredicted RBP8.15□□□□□ -1.1
MACF1-220ENST00000485063 EDEM3Q9BZQ6 932 aa8.15□□□□□ -1.1
MACF1-220ENST00000485063 NUCKS1Q9H1E3 243 aaKnown RBP8.15□□□□□ -1.1
MACF1-220ENST00000485063 CHRDQ9H2X0 955 aa8.15□□□□□ -1.1
MACF1-220ENST00000485063 TMEM51Q9NW97 253 aa8.15□□□□□ -1.1
MACF1-220ENST00000485063 RRN3Q9NYV6 651 aa8.15□□□□□ -1.1
MACF1-220ENST00000485063 DLGAP2Q9P1A6 1054 aa8.15□□□□□ -1.1
MACF1-220ENST00000485063 DEC1Q9P2X7 70 aa8.15□□□□□ -1.1
MACF1-220ENST00000485063 CYTH4Q9UIA0 394 aa8.15□□□□□ -1.1
MACF1-220ENST00000485063 AGO1Q9UL18 857 aaKnown RBP8.15□□□□□ -1.1
MACF1-220ENST00000485063 STAP1Q9ULZ2 295 aa8.15□□□□□ -1.1
MACF1-220ENST00000485063 NAALADL1Q9UQQ1 740 aa8.15□□□□□ -1.1
MACF1-220ENST00000485063 TLR6Q9Y2C9 796 aa8.15□□□□□ -1.1
MACF1-220ENST00000485063 MYOFQ9NZM1 2061 aa8.15□□□□□ -1.11
MACF1-220ENST00000485063 KIAA1549LQ6ZVL6 1849 aa8.15□□□□□ -1.11
MACF1-220ENST00000485063 SHISA7A6NL88 538 aa8.14□□□□□ -1.11
MACF1-220ENST00000485063 LRRC53A6NM62 1247 aa8.14□□□□□ -1.11
MACF1-220ENST00000485063 H0Y858 1186 aa8.14□□□□□ -1.11
MACF1-220ENST00000485063 HOXC11O43248 304 aaPredicted RBP8.14□□□□□ -1.11
MACF1-220ENST00000485063 MSI1O43347 362 aaKnown RBP8.14□□□□□ -1.11
MACF1-220ENST00000485063 EGFP01133 1207 aa8.14□□□□□ -1.11
MACF1-220ENST00000485063 ERBB2P04626 1255 aa8.14□□□□□ -1.11
MACF1-220ENST00000485063 TPM1P09493 284 aa8.14□□□□□ -1.11
MACF1-220ENST00000485063 SLC2A3P11169 496 aa8.14□□□□□ -1.11
MACF1-220ENST00000485063 TYRP14679 529 aa8.14□□□□□ -1.11
MACF1-220ENST00000485063 DESP17661 470 aa8.14□□□□□ -1.11
MACF1-220ENST00000485063 TNFAIP3P21580 790 aa8.14□□□□□ -1.11
MACF1-220ENST00000485063 NOS2P35228 1153 aa8.14□□□□□ -1.11
MACF1-220ENST00000485063 SCNN1AP37088 669 aa8.14□□□□□ -1.11
MACF1-220ENST00000485063 GABRB2P47870 512 aa8.14□□□□□ -1.11
MACF1-220ENST00000485063 CXCL12P48061 93 aa8.14□□□□□ -1.11
MACF1-220ENST00000485063 NRLP54845 237 aa8.14□□□□□ -1.11
MACF1-220ENST00000485063 RNASE9P60153 205 aaKnown RBP8.14□□□□□ -1.11
MACF1-220ENST00000485063 NOMO3P69849 1222 aa8.14□□□□□ -1.11
MACF1-220ENST00000485063 FZD5Q13467 585 aa8.14□□□□□ -1.11
MACF1-220ENST00000485063 CCINQ13939 588 aa8.14□□□□□ -1.11
MACF1-220ENST00000485063 E2F5Q15329 346 aa8.14□□□□□ -1.11
MACF1-220ENST00000485063 ASIC2Q16515 512 aa8.14□□□□□ -1.11
MACF1-220ENST00000485063 PTPN20Q4JDL3 420 aa8.14□□□□□ -1.11
MACF1-220ENST00000485063 MPPE1Q53F39 396 aa8.14□□□□□ -1.11
MACF1-220ENST00000485063 FIGNQ5HY92 759 aa8.14□□□□□ -1.11
MACF1-220ENST00000485063 FAM102AQ5T9C2 384 aaPredicted RBP8.14□□□□□ -1.11
MACF1-220ENST00000485063 SFMBT2Q5VUG0 894 aa8.14□□□□□ -1.11
MACF1-220ENST00000485063 NAA35Q5VZE5 725 aa8.14□□□□□ -1.11
MACF1-220ENST00000485063 GRAMD4Q6IC98 578 aa8.14□□□□□ -1.11
MACF1-220ENST00000485063 FSTL4Q6MZW2 842 aa8.14□□□□□ -1.11
MACF1-220ENST00000485063 ZC3H14Q6PJT7 736 aaKnown RBP8.14□□□□□ -1.11
MACF1-220ENST00000485063 SLC26A9Q7LBE3 791 aa8.14□□□□□ -1.11
MACF1-220ENST00000485063 TMEM25Q86YD3 366 aa8.14□□□□□ -1.11
MACF1-220ENST00000485063 CCDC117Q8IWD4 279 aaPredicted RBP8.14□□□□□ -1.11
MACF1-220ENST00000485063 DEFB106AQ8N104 65 aa8.14□□□□□ -1.11
MACF1-220ENST00000485063 CPXM2Q8N436 756 aa8.14□□□□□ -1.11
MACF1-220ENST00000485063 SPEM1Q8N4L4 309 aa8.14□□□□□ -1.11
MACF1-220ENST00000485063 NAT16Q8N8M0 369 aa8.14□□□□□ -1.11
MACF1-220ENST00000485063 ATP6V0D2Q8N8Y2 350 aa8.14□□□□□ -1.11
MACF1-220ENST00000485063 PRSS33Q8NF86 280 aa8.14□□□□□ -1.11
MACF1-220ENST00000485063 DQX1Q8TE96 717 aaKnown RBP8.14□□□□□ -1.11
MACF1-220ENST00000485063 DDI1Q8WTU0 396 aa8.14□□□□□ -1.11
MACF1-220ENST00000485063 SLC20A1Q8WUM9 679 aa8.14□□□□□ -1.11
MACF1-220ENST00000485063 CPA5Q8WXQ8 436 aa8.14□□□□□ -1.11
MACF1-220ENST00000485063 RNF34Q969K3 372 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms