RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 CDC25BP30305 580 aa27.92■■■□□ 2.06
CCM2-211ENST00000478582 NOS2P35228 1153 aa27.92■■■□□ 2.06
CCM2-211ENST00000478582 MATKP42679 507 aa27.92■■■□□ 2.06
CCM2-211ENST00000478582 RING1Q06587 406 aa27.92■■■□□ 2.06
CCM2-211ENST00000478582 RUNX3Q13761 415 aa27.92■■■□□ 2.06
CCM2-211ENST00000478582 TRIM68Q6AZZ1 485 aa27.92■■■□□ 2.06
CCM2-211ENST00000478582 ADGRG2Q8IZP9 1017 aa27.92■■■□□ 2.06
CCM2-211ENST00000478582 ATP2A3Q93084 1043 aa27.92■■■□□ 2.06
CCM2-211ENST00000478582 SERPINB11Q96P15 392 aa27.92■■■□□ 2.06
CCM2-211ENST00000478582 RRN3Q9NYV6 651 aa27.92■■■□□ 2.06
CCM2-211ENST00000478582 ZNF510Q9Y2H8 683 aa27.92■■■□□ 2.06
CCM2-211ENST00000478582 PIAS3Q9Y6X2 628 aa27.92■■■□□ 2.06
CCM2-211ENST00000478582 GOLGA8SH3BPF8 625 aa27.91■■■□□ 2.06
CCM2-211ENST00000478582 RTN2O75298 545 aa27.91■■■□□ 2.06
CCM2-211ENST00000478582 IGLV3-27P01718 113 aa27.91■■■□□ 2.06
CCM2-211ENST00000478582 MAGEA9P43362 315 aa27.91■■■□□ 2.06
CCM2-211ENST00000478582 MRE11P49959 708 aa27.91■■■□□ 2.06
CCM2-211ENST00000478582 CDK17Q00537 523 aa27.91■■■□□ 2.06
CCM2-211ENST00000478582 TNK2Q07912 1038 aa27.91■■■□□ 2.06
CCM2-211ENST00000478582 MAPK8IP2Q13387 824 aaPredicted RBP27.91■■■□□ 2.06
CCM2-211ENST00000478582 EIF4EBP2Q13542 120 aaPredicted RBP27.91■■■□□ 2.06
CCM2-211ENST00000478582 ITPRIPL2Q3MIP1 535 aa27.91■■■□□ 2.06
CCM2-211ENST00000478582 C3orf20Q8ND61 904 aa27.91■■■□□ 2.06
CCM2-211ENST00000478582 CLDN23Q96B33 292 aa27.91■■■□□ 2.06
CCM2-211ENST00000478582 ISCUQ9H1K1 167 aa27.91■■■□□ 2.06
CCM2-211ENST00000478582 EBF3Q9H4W6 596 aa27.91■■■□□ 2.06
CCM2-211ENST00000478582 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP27.91■■■□□ 2.069e-7■■■■□ 19.3
CCM2-211ENST00000478582 TLR6Q9Y2C9 796 aa27.91■■■□□ 2.06
CCM2-211ENST00000478582 F5P12259 2224 aa27.9■■■□□ 2.06
CCM2-211ENST00000478582 SSU72P8A0A1W2PR75 194 aa27.9■■■□□ 2.06
CCM2-211ENST00000478582 TCRBV5S1A1TA0A578 114 aa27.9■■■□□ 2.06
CCM2-211ENST00000478582 MSI1O43347 362 aaKnown RBP27.9■■■□□ 2.06
CCM2-211ENST00000478582 ADCY5O95622 1261 aa27.9■■■□□ 2.06
CCM2-211ENST00000478582 TRUB2O95900 331 aaKnown RBP27.9■■■□□ 2.06
CCM2-211ENST00000478582 KLKB1P03952 638 aa27.9■■■□□ 2.06
CCM2-211ENST00000478582 ARSAP15289 507 aa27.9■■■□□ 2.06
CCM2-211ENST00000478582 TAC4Q86UU9 113 aa27.9■■■□□ 2.06
CCM2-211ENST00000478582 C1orf210Q8IVY1 113 aa27.9■■■□□ 2.06
CCM2-211ENST00000478582 BBS7Q8IWZ6 715 aa27.9■■■□□ 2.06
CCM2-211ENST00000478582 TC2NQ8N9U0 490 aa27.9■■■□□ 2.06
CCM2-211ENST00000478582 FAM3CQ92520 227 aa27.9■■■□□ 2.06
CCM2-211ENST00000478582 NT5C3BQ969T7 300 aa27.9■■■□□ 2.06
CCM2-211ENST00000478582 MSANTD3Q96H12 275 aa27.9■■■□□ 2.06
CCM2-211ENST00000478582 SLC39A13Q96H72 371 aa27.9■■■□□ 2.06
CCM2-211ENST00000478582 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP27.9■■■□□ 2.06
CCM2-211ENST00000478582 C8orf33Q9H7E9 229 aaPredicted RBP27.9■■■□□ 2.06
CCM2-211ENST00000478582 ECT2Q9H8V3 914 aa27.9■■■□□ 2.06
CCM2-211ENST00000478582 GTSE1Q9NYZ3 720 aa27.9■■■□□ 2.06
CCM2-211ENST00000478582 A0A087X0T9 212 aa27.89■■■□□ 2.06
CCM2-211ENST00000478582 TMCO5BA8MYB1 307 aa27.89■■■□□ 2.06
CCM2-211ENST00000478582 NFATC1O95644 943 aa27.89■■■□□ 2.06
CCM2-211ENST00000478582 FTLP02792 175 aaPredicted RBP27.89■■■□□ 2.06
CCM2-211ENST00000478582 HMBSP08397 361 aa27.89■■■□□ 2.06
CCM2-211ENST00000478582 FAM228BP0C875 321 aa27.89■■■□□ 2.06
CCM2-211ENST00000478582 EIF4A3P38919 411 aaKnown RBP27.89■■■□□ 2.06
CCM2-211ENST00000478582 TBX4P57082 545 aa27.89■■■□□ 2.06
CCM2-211ENST00000478582 RNASE9P60153 205 aaKnown RBP27.89■■■□□ 2.06
CCM2-211ENST00000478582 FZD5Q13467 585 aa27.89■■■□□ 2.06
CCM2-211ENST00000478582 CPA6Q8N4T0 437 aa27.89■■■□□ 2.06
CCM2-211ENST00000478582 NPY6RQ99463 290 aa27.89■■■□□ 2.06
CCM2-211ENST00000478582 TMEM51Q9NW97 253 aa27.89■■■□□ 2.06
CCM2-211ENST00000478582 OTOL1A6NHN0 477 aaPredicted RBP27.88■■■□□ 2.05
CCM2-211ENST00000478582 SIGLEC16A6NMB1 481 aa27.88■■■□□ 2.05
CCM2-211ENST00000478582 IRAK2O43187 625 aa27.88■■■□□ 2.05
CCM2-211ENST00000478582 LATS1O95835 1130 aa27.88■■■□□ 2.05
CCM2-211ENST00000478582 CORO1AP31146 461 aaKnown RBP27.88■■■□□ 2.05
CCM2-211ENST00000478582 RPS9P46781 194 aaKnown RBP27.88■■■□□ 2.05
CCM2-211ENST00000478582 HARS2P49590 506 aaKnown RBP27.88■■■□□ 2.05
CCM2-211ENST00000478582 PITX1P78337 314 aaPredicted RBP27.88■■■□□ 2.05
CCM2-211ENST00000478582 ASTE1Q2TB18 679 aaPredicted RBP27.88■■■□□ 2.05
CCM2-211ENST00000478582 C1orf228Q6PIY5 440 aa27.88■■■□□ 2.05
CCM2-211ENST00000478582 UNC45BQ8IWX7 931 aa27.88■■■□□ 2.05
CCM2-211ENST00000478582 ZNF687Q8N1G0 1237 aa27.88■■■□□ 2.05
CCM2-211ENST00000478582 AZIN2Q96A70 460 aa27.88■■■□□ 2.05
CCM2-211ENST00000478582 METTL5Q9NRN9 209 aaKnown RBP27.88■■■□□ 2.05
CCM2-211ENST00000478582 STAP1Q9ULZ2 295 aa27.88■■■□□ 2.05
CCM2-211ENST00000478582 NENFQ9UMX5 172 aa27.88■■■□□ 2.05
CCM2-211ENST00000478582 SCAMP3O14828 347 aaKnown RBP27.87■■■□□ 2.05
CCM2-211ENST00000478582 KRT3P12035 628 aa27.87■■■□□ 2.05
CCM2-211ENST00000478582 GBP1P32455 592 aa27.87■■■□□ 2.05
CCM2-211ENST00000478582 FLT3P36888 993 aa27.87■■■□□ 2.05
CCM2-211ENST00000478582 NBL1P41271 181 aa27.87■■■□□ 2.05
CCM2-211ENST00000478582 NR1H3Q13133 447 aa27.87■■■□□ 2.05
CCM2-211ENST00000478582 NUGGCQ68CJ6 796 aa27.87■■■□□ 2.05
CCM2-211ENST00000478582 ARHGAP30Q7Z6I6 1101 aaPredicted RBP27.87■■■□□ 2.05
CCM2-211ENST00000478582 PHLDB2Q86SQ0 1253 aa27.87■■■□□ 2.05
CCM2-211ENST00000478582 ADAM32Q8TC27 787 aa27.87■■■□□ 2.05
CCM2-211ENST00000478582 PGAP3Q96FM1 320 aaPredicted RBP27.87■■■□□ 2.05
CCM2-211ENST00000478582 FCRL2Q96LA5 508 aaPredicted RBP27.87■■■□□ 2.05
CCM2-211ENST00000478582 STOML2Q9UJZ1 356 aa27.87■■■□□ 2.05
CCM2-211ENST00000478582 AGO1Q9UL18 857 aaKnown RBP27.87■■■□□ 2.05
CCM2-211ENST00000478582 NDRG2Q9UN36 371 aaKnown RBP27.87■■■□□ 2.05
CCM2-211ENST00000478582 PROB1E7EW31 1015 aa27.86■■■□□ 2.05
CCM2-211ENST00000478582 RRM1P23921 792 aa27.86■■■□□ 2.05
CCM2-211ENST00000478582 SLC25A52Q3SY17 297 aa27.86■■■□□ 2.05
CCM2-211ENST00000478582 PPP1R15BQ5SWA1 713 aa27.86■■■□□ 2.05
CCM2-211ENST00000478582 TRNP1Q6NT89 227 aa27.86■■■□□ 2.05
CCM2-211ENST00000478582 RHBDF2Q6PJF5 856 aa27.86■■■□□ 2.05
CCM2-211ENST00000478582 RALGPS2Q86X27 583 aaPredicted RBP27.86■■■□□ 2.05
CCM2-211ENST00000478582 DENND1CQ8IV53 801 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms