RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 R4GN57 208 aa18.42■□□□□ 0.54
SREBF1-211ENST00000476994 DMDP11532 3685 aa18.42■□□□□ 0.54
SREBF1-211ENST00000476994 OAS1P00973 400 aaKnown RBP18.41■□□□□ 0.54
SREBF1-211ENST00000476994 SP9P0CG40 484 aa18.41■□□□□ 0.54
SREBF1-211ENST00000476994 GABRR2P28476 465 aa18.41■□□□□ 0.54
SREBF1-211ENST00000476994 PPP3CCP48454 512 aa18.41■□□□□ 0.54
SREBF1-211ENST00000476994 PITX1P78337 314 aaPredicted RBP18.41■□□□□ 0.54
SREBF1-211ENST00000476994 KIF5AQ12840 1032 aa18.41■□□□□ 0.54
SREBF1-211ENST00000476994 MSANTD2Q6P1R3 559 aa18.41■□□□□ 0.54
SREBF1-211ENST00000476994 POTEHQ6S545 545 aa18.41■□□□□ 0.54
SREBF1-211ENST00000476994 DEFB106AQ8N104 65 aa18.41■□□□□ 0.54
SREBF1-211ENST00000476994 ARHGAP18Q8N392 663 aa18.41■□□□□ 0.54
SREBF1-211ENST00000476994 RXFP2Q8WXD0 754 aa18.41■□□□□ 0.54
SREBF1-211ENST00000476994 FAM149B1Q96BN6 582 aa18.41■□□□□ 0.54
SREBF1-211ENST00000476994 TCEAL4Q96EI5 215 aa18.41■□□□□ 0.54
SREBF1-211ENST00000476994 ABCC13Q9NSE7 274 aa18.41■□□□□ 0.54
SREBF1-211ENST00000476994 DLGAP2Q9P1A6 1054 aa18.41■□□□□ 0.54
SREBF1-211ENST00000476994 CTTNBP2NLQ9P2B4 639 aa18.41■□□□□ 0.54
SREBF1-211ENST00000476994 NAALADL1Q9UQQ1 740 aa18.41■□□□□ 0.54
SREBF1-211ENST00000476994 GVINP1Q7Z2Y8 2422 aa18.4■□□□□ 0.54
SREBF1-211ENST00000476994 FAM170BA6NMN3 283 aa18.4■□□□□ 0.54
SREBF1-211ENST00000476994 OLFM2O95897 454 aa18.4■□□□□ 0.54
SREBF1-211ENST00000476994 IGLV3-25P01717 112 aa18.4■□□□□ 0.54
SREBF1-211ENST00000476994 CEBPBP17676 345 aa18.4■□□□□ 0.54
SREBF1-211ENST00000476994 TFE3P19532 575 aaPredicted RBP18.4■□□□□ 0.54
SREBF1-211ENST00000476994 NOS2P35228 1153 aa18.4■□□□□ 0.54
SREBF1-211ENST00000476994 MATKP42679 507 aa18.4■□□□□ 0.54
SREBF1-211ENST00000476994 TUBP50607 506 aa18.4■□□□□ 0.54
SREBF1-211ENST00000476994 EIF4EBP2Q13542 120 aaPredicted RBP18.4■□□□□ 0.54
SREBF1-211ENST00000476994 TAF12Q16514 161 aa18.4■□□□□ 0.54
SREBF1-211ENST00000476994 ZNF852Q6ZMS4 543 aa18.4■□□□□ 0.54
SREBF1-211ENST00000476994 TPRG1Q6ZUI0 275 aa18.4■□□□□ 0.54
SREBF1-211ENST00000476994 C17orf53Q8N3J3 647 aaPredicted RBP18.4■□□□□ 0.54
SREBF1-211ENST00000476994 TXLNBQ8N3L3 684 aa18.4■□□□□ 0.54
SREBF1-211ENST00000476994 TPCN2Q8NHX9 752 aa18.4■□□□□ 0.54
SREBF1-211ENST00000476994 EDEM1Q92611 657 aa18.4■□□□□ 0.54
SREBF1-211ENST00000476994 DNASE1L2Q92874 299 aa18.4■□□□□ 0.54
SREBF1-211ENST00000476994 TRIM44Q96DX7 344 aaPredicted RBP18.4■□□□□ 0.54
SREBF1-211ENST00000476994 BTBD6Q96KE9 485 aa18.4■□□□□ 0.54
SREBF1-211ENST00000476994 NPY6RQ99463 290 aa18.4■□□□□ 0.54
SREBF1-211ENST00000476994 TSGA10Q9BZW7 698 aa18.4■□□□□ 0.54
SREBF1-211ENST00000476994 BRD9Q9H8M2 597 aa18.4■□□□□ 0.54
SREBF1-211ENST00000476994 LTB4R2Q9NPC1 389 aa18.4■□□□□ 0.54
SREBF1-211ENST00000476994 TRPM5Q9NZQ8 1165 aa18.4■□□□□ 0.54
SREBF1-211ENST00000476994 CALCOCO1Q9P1Z2 691 aa18.4■□□□□ 0.54
SREBF1-211ENST00000476994 ANAPC7Q9UJX3 599 aa18.4■□□□□ 0.54
SREBF1-211ENST00000476994 DOCK4Q8N1I0 1966 aa18.39■□□□□ 0.53
SREBF1-211ENST00000476994 EP300Q09472 2414 aaPredicted RBP18.39■□□□□ 0.53
SREBF1-211ENST00000476994 ZSCAN12O43309 604 aa18.39■□□□□ 0.53
SREBF1-211ENST00000476994 MYL4P12829 197 aa18.39■□□□□ 0.53
SREBF1-211ENST00000476994 RARGP13631 454 aa18.39■□□□□ 0.53
SREBF1-211ENST00000476994 GPD1P21695 349 aa18.39■□□□□ 0.53
SREBF1-211ENST00000476994 CDC25CP30307 473 aa18.39■□□□□ 0.53
SREBF1-211ENST00000476994 PTPN9P43378 593 aa18.39■□□□□ 0.53
SREBF1-211ENST00000476994 ZNF143P52747 638 aaPredicted RBP18.39■□□□□ 0.53
SREBF1-211ENST00000476994 RNASE9P60153 205 aaKnown RBP18.39■□□□□ 0.53
SREBF1-211ENST00000476994 CYP4F8P98187 520 aa18.39■□□□□ 0.53
SREBF1-211ENST00000476994 CCDC14Q49A88 953 aa18.39■□□□□ 0.53
SREBF1-211ENST00000476994 BTBD8Q5XKL5 378 aa18.39■□□□□ 0.53
SREBF1-211ENST00000476994 DCUN1D2Q6PH85 259 aa18.39■□□□□ 0.53
SREBF1-211ENST00000476994 CPNE8Q86YQ8 564 aa18.39■□□□□ 0.53
SREBF1-211ENST00000476994 NIPA2Q8N8Q9 360 aa18.39■□□□□ 0.53
SREBF1-211ENST00000476994 DQX1Q8TE96 717 aaKnown RBP18.39■□□□□ 0.53
SREBF1-211ENST00000476994 CENPIQ92674 756 aaPredicted RBP18.39■□□□□ 0.53
SREBF1-211ENST00000476994 IRF7Q92985 503 aa18.39■□□□□ 0.53
SREBF1-211ENST00000476994 TRMT61BQ9BVS5 477 aaKnown RBP18.39■□□□□ 0.53
SREBF1-211ENST00000476994 CCSER2Q9H7U1 834 aa18.39■□□□□ 0.53
SREBF1-211ENST00000476994 TRMT1Q9NXH9 659 aaKnown RBP18.39■□□□□ 0.53
SREBF1-211ENST00000476994 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.39■□□□□ 0.53
SREBF1-211ENST00000476994 FBXO4Q9UKT5 387 aa18.39■□□□□ 0.53
SREBF1-211ENST00000476994 WDR87Q6ZQQ6 2873 aa18.39■□□□□ 0.53
SREBF1-211ENST00000476994 TICRRQ7Z2Z1 1910 aa18.39■□□□□ 0.53
SREBF1-211ENST00000476994 A0A1W2PRU2 124 aa18.38■□□□□ 0.53
SREBF1-211ENST00000476994 C2orf78A6NCI8 922 aa18.38■□□□□ 0.53
SREBF1-211ENST00000476994 MAN2B1O00754 1011 aa18.38■□□□□ 0.53
SREBF1-211ENST00000476994 CCP110O43303 1012 aa18.38■□□□□ 0.53
SREBF1-211ENST00000476994 BUB1O43683 1085 aa18.38■□□□□ 0.53
SREBF1-211ENST00000476994 KRT86O43790 486 aa18.38■□□□□ 0.53
SREBF1-211ENST00000476994 TLR5O60602 858 aa18.38■□□□□ 0.53
SREBF1-211ENST00000476994 ENDOD1O94919 500 aa18.38■□□□□ 0.53
SREBF1-211ENST00000476994 FGF19O95750 216 aa18.38■□□□□ 0.53
SREBF1-211ENST00000476994 NCAM1P13591 858 aa18.38■□□□□ 0.53
SREBF1-211ENST00000476994 PDGFRAP16234 1089 aa18.38■□□□□ 0.53
SREBF1-211ENST00000476994 GJA1P17302 382 aa18.38■□□□□ 0.53
SREBF1-211ENST00000476994 ID4P47928 161 aa18.38■□□□□ 0.53
SREBF1-211ENST00000476994 ZNF528Q3MIS6 628 aa18.38■□□□□ 0.53
SREBF1-211ENST00000476994 RAB6CQ53S08 254 aa18.38■□□□□ 0.53
SREBF1-211ENST00000476994 DCAF6Q58WW2 860 aa18.38■□□□□ 0.53
SREBF1-211ENST00000476994 STXBP5Q5T5C0 1151 aa18.38■□□□□ 0.53
SREBF1-211ENST00000476994 KLHDC10Q6PID8 442 aa18.38■□□□□ 0.53
SREBF1-211ENST00000476994 RNF10Q8N5U6 811 aaKnown RBP18.38■□□□□ 0.53
SREBF1-211ENST00000476994 ARFGAP1Q8N6T3 406 aa18.38■□□□□ 0.53
SREBF1-211ENST00000476994 LRRC57Q8N9N7 239 aa18.38■□□□□ 0.53
SREBF1-211ENST00000476994 CFAP57Q96MR6 1250 aa18.38■□□□□ 0.53
SREBF1-211ENST00000476994 SLC22A12Q96S37 553 aa18.38■□□□□ 0.53
SREBF1-211ENST00000476994 CNPY3Q9BT09 278 aa18.38■□□□□ 0.53
SREBF1-211ENST00000476994 TRIM62Q9BVG3 475 aa18.38■□□□□ 0.53
SREBF1-211ENST00000476994 RAB6CQ9H0N0 254 aa18.38■□□□□ 0.53
SREBF1-211ENST00000476994 SLITRK6Q9H5Y7 841 aa18.38■□□□□ 0.53
SREBF1-211ENST00000476994 LZTFL1Q9NQ48 299 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms