RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 PNPLA1Q8N8W4 532 aa16.4■□□□□ 0.22
SRRT-209ENST00000474896 TAS1R2Q8TE23 839 aa16.4■□□□□ 0.22
SRRT-209ENST00000474896 UCMAQ8WVF2 138 aa16.4■□□□□ 0.22
SRRT-209ENST00000474896 DNASE2BQ8WZ79 361 aa16.4■□□□□ 0.22
SRRT-209ENST00000474896 HEXIM2Q96MH2 286 aaKnown RBP16.4■□□□□ 0.22
SRRT-209ENST00000474896 GPR174Q9BXC1 333 aa16.4■□□□□ 0.22
SRRT-209ENST00000474896 MKRN2Q9H000 416 aaKnown RBP16.4■□□□□ 0.22
SRRT-209ENST00000474896 CLIC5Q9NZA1 410 aa16.4■□□□□ 0.22
SRRT-209ENST00000474896 USP36Q9P275 1121 aaKnown RBP16.4■□□□□ 0.22
SRRT-209ENST00000474896 RASAL2Q9UJF2 1139 aa16.4■□□□□ 0.22
SRRT-209ENST00000474896 LHX6Q9UPM6 363 aa16.4■□□□□ 0.22
SRRT-209ENST00000474896 USP3Q9Y6I4 520 aa16.4■□□□□ 0.22
SRRT-209ENST00000474896 ATRXP46100 2492 aa16.39■□□□□ 0.21
SRRT-209ENST00000474896 A0A1B0GTW7 788 aa16.39■□□□□ 0.21
SRRT-209ENST00000474896 MEI4A8MW99 385 aa16.39■□□□□ 0.21
SRRT-209ENST00000474896 KCNJ18B7U540 433 aa16.39■□□□□ 0.21
SRRT-209ENST00000474896 GOLGA6L22H0YM25 854 aa16.39■□□□□ 0.21
SRRT-209ENST00000474896 NPC1O15118 1278 aa16.39■□□□□ 0.21
SRRT-209ENST00000474896 SYNCRIPO60506 623 aaKnown RBP16.39■□□□□ 0.21
SRRT-209ENST00000474896 TRIM49P0CI25 452 aa16.39■□□□□ 0.21
SRRT-209ENST00000474896 TRIM49CP0CI26 452 aa16.39■□□□□ 0.21
SRRT-209ENST00000474896 NCAM1P13591 858 aa16.39■□□□□ 0.21
SRRT-209ENST00000474896 CORO1AP31146 461 aaKnown RBP16.39■□□□□ 0.21
SRRT-209ENST00000474896 ZNF132P52740 706 aa16.39■□□□□ 0.21
SRRT-209ENST00000474896 UBE2HP62256 183 aa16.39■□□□□ 0.21
SRRT-209ENST00000474896 PPP3CAQ08209 521 aa16.39■□□□□ 0.21
SRRT-209ENST00000474896 GRIK2Q13002 908 aa16.39■□□□□ 0.21
SRRT-209ENST00000474896 ZNF394Q53GI3 561 aa16.39■□□□□ 0.21
SRRT-209ENST00000474896 NAXDQ8IW45 347 aa16.39■□□□□ 0.21
SRRT-209ENST00000474896 PIWIL1Q96J94 861 aaKnown RBP16.39■□□□□ 0.21
SRRT-209ENST00000474896 CDK5RAP1Q96SZ6 601 aaKnown RBP16.39■□□□□ 0.21
SRRT-209ENST00000474896 DCLK3Q9C098 648 aa16.39■□□□□ 0.21
SRRT-209ENST00000474896 ZDHHC5Q9C0B5 715 aa16.39■□□□□ 0.21
SRRT-209ENST00000474896 DNAI2Q9GZS0 605 aa16.39■□□□□ 0.21
SRRT-209ENST00000474896 MIR1-1HGQ9H1L0 117 aa16.39■□□□□ 0.21
SRRT-209ENST00000474896 MMRN2Q9H8L6 949 aa16.39■□□□□ 0.21
SRRT-209ENST00000474896 AGO1Q9UL18 857 aaKnown RBP16.39■□□□□ 0.21
SRRT-209ENST00000474896 TRAF3IP3Q9Y228 551 aa16.39■□□□□ 0.21
SRRT-209ENST00000474896 ZFYVE26Q68DK2 2539 aa16.39■□□□□ 0.21
SRRT-209ENST00000474896 PKD1L2Q7Z442 2459 aa16.38■□□□□ 0.21
SRRT-209ENST00000474896 MAPK13O15264 365 aa16.38■□□□□ 0.21
SRRT-209ENST00000474896 CAPNS1P04632 268 aa16.38■□□□□ 0.21
SRRT-209ENST00000474896 FTH1P19P0C7X4 201 aa16.38■□□□□ 0.21
SRRT-209ENST00000474896 OXTRP30559 389 aa16.38■□□□□ 0.21
SRRT-209ENST00000474896 SYKP43405 635 aa16.38■□□□□ 0.21
SRRT-209ENST00000474896 TPMTP51580 245 aa16.38■□□□□ 0.21
SRRT-209ENST00000474896 ENPP2Q13822 863 aa16.38■□□□□ 0.21
SRRT-209ENST00000474896 DCAF12L1Q5VU92 463 aa16.38■□□□□ 0.21
SRRT-209ENST00000474896 DENND1CQ8IV53 801 aa16.38■□□□□ 0.21
SRRT-209ENST00000474896 CCDC150Q8NCX0 1101 aa16.38■□□□□ 0.21
SRRT-209ENST00000474896 CADM4Q8NFZ8 388 aa16.38■□□□□ 0.21
SRRT-209ENST00000474896 ADAMTS14Q8WXS8 1223 aa16.38■□□□□ 0.21
SRRT-209ENST00000474896 PRCCQ92733 491 aaPredicted RBP16.38■□□□□ 0.21
SRRT-209ENST00000474896 SIPA1Q96FS4 1042 aa16.38■□□□□ 0.21
SRRT-209ENST00000474896 NIF3L1Q9GZT8 377 aa16.38■□□□□ 0.21
SRRT-209ENST00000474896 LMBRD1Q9NUN5 540 aa16.38■□□□□ 0.21
SRRT-209ENST00000474896 ELOVL2Q9NXB9 296 aa16.38■□□□□ 0.21
SRRT-209ENST00000474896 CLEC4EQ9ULY5 219 aa16.38■□□□□ 0.21
SRRT-209ENST00000474896 METTL12A8MUP2 240 aa16.37■□□□□ 0.21
SRRT-209ENST00000474896 CYBBP04839 570 aa16.37■□□□□ 0.21
SRRT-209ENST00000474896 KRT13P13646 458 aa16.37■□□□□ 0.21
SRRT-209ENST00000474896 NR2F2P24468 414 aa16.37■□□□□ 0.21
SRRT-209ENST00000474896 SCAPQ12770 1279 aa16.37■□□□□ 0.21
SRRT-209ENST00000474896 ZNF234Q14588 700 aa16.37■□□□□ 0.21
SRRT-209ENST00000474896 INTS8Q75QN2 995 aaKnown RBP16.37■□□□□ 0.21
SRRT-209ENST00000474896 FAM186BQ8IYM0 893 aa16.37■□□□□ 0.21
SRRT-209ENST00000474896 ZCCHC9Q8N567 271 aaKnown RBP16.37■□□□□ 0.21
SRRT-209ENST00000474896 DDI1Q8WTU0 396 aa16.37■□□□□ 0.21
SRRT-209ENST00000474896 SORCS1Q8WY21 1168 aa16.37■□□□□ 0.21
SRRT-209ENST00000474896 NUP58Q9BVL2 599 aa16.37■□□□□ 0.21
SRRT-209ENST00000474896 IL21RQ9HBE5 538 aa16.37■□□□□ 0.21
SRRT-209ENST00000474896 MARCH2Q9P0N8 246 aa16.37■□□□□ 0.21
SRRT-209ENST00000474896 USP25Q9UHP3 1055 aa16.37■□□□□ 0.21
SRRT-209ENST00000474896 MAPK8IP1Q9UQF2 711 aa16.37■□□□□ 0.21
SRRT-209ENST00000474896 NFE2L3Q9Y4A8 694 aa16.37■□□□□ 0.21
SRRT-209ENST00000474896 SPEGQ15772 3267 aa16.37■□□□□ 0.21
SRRT-209ENST00000474896 WDFY3Q8IZQ1 3526 aa16.36■□□□□ 0.21
SRRT-209ENST00000474896 SLC12A8A0AV02 714 aa16.36■□□□□ 0.21
SRRT-209ENST00000474896 BCAT2O15382 392 aaPredicted RBP16.36■□□□□ 0.21
SRRT-209ENST00000474896 TIMM44O43615 452 aa16.36■□□□□ 0.21
SRRT-209ENST00000474896 MYL1P05976 194 aa16.36■□□□□ 0.21
SRRT-209ENST00000474896 ACADMP11310 421 aa16.36■□□□□ 0.21
SRRT-209ENST00000474896 COPAP53621 1224 aa16.36■□□□□ 0.21
SRRT-209ENST00000474896 ADAM9Q13443 819 aa16.36■□□□□ 0.21
SRRT-209ENST00000474896 E2F5Q15329 346 aa16.36■□□□□ 0.21
SRRT-209ENST00000474896 RSRC2Q7L4I2 434 aaKnown RBP16.36■□□□□ 0.21
SRRT-209ENST00000474896 ANKS1BQ7Z6G8 1248 aa16.36■□□□□ 0.21
SRRT-209ENST00000474896 SLCO6A1Q86UG4 719 aa16.36■□□□□ 0.21
SRRT-209ENST00000474896 PROSER1Q86XN7 944 aa16.36■□□□□ 0.21
SRRT-209ENST00000474896 FMR1NBQ8N0W7 255 aaPredicted RBP16.36■□□□□ 0.21
SRRT-209ENST00000474896 ARHGAP18Q8N392 663 aa16.36■□□□□ 0.21
SRRT-209ENST00000474896 ENGASEQ8NFI3 743 aa16.36■□□□□ 0.21
SRRT-209ENST00000474896 SETD7Q8WTS6 366 aaKnown RBP16.36■□□□□ 0.21
SRRT-209ENST00000474896 UBXN6Q9BZV1 441 aa16.36■□□□□ 0.21
SRRT-209ENST00000474896 CIPCQ9C0C6 399 aa16.36■□□□□ 0.21
SRRT-209ENST00000474896 GAREM1Q9H706 876 aa16.36■□□□□ 0.21
SRRT-209ENST00000474896 TMEM8AQ9HCN3 771 aa16.36■□□□□ 0.21
SRRT-209ENST00000474896 EIF2B4Q9UI10 523 aaKnown RBP16.36■□□□□ 0.21
SRRT-209ENST00000474896 STRIP2Q9ULQ0 834 aa16.36■□□□□ 0.21
SRRT-209ENST00000474896 APOBEC2Q9Y235 224 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms