RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 MSI1O43347 362 aaKnown RBP10.13□□□□□ -0.79
CCM2-204ENST00000470837 CREB3O43889 395 aa10.13□□□□□ -0.79
CCM2-204ENST00000470837 MOCS2O96007 188 aaPredicted RBP10.13□□□□□ -0.79
CCM2-204ENST00000470837 MBL2P11226 248 aaPredicted RBP10.13□□□□□ -0.79
CCM2-204ENST00000470837 TCF4P15884 667 aa10.13□□□□□ -0.79
CCM2-204ENST00000470837 PFKLP17858 780 aa10.13□□□□□ -0.79
CCM2-204ENST00000470837 DDX6P26196 483 aaKnown RBP eCLIP10.13□□□□□ -0.79
CCM2-204ENST00000470837 SLC11A2P49281 568 aa10.13□□□□□ -0.79
CCM2-204ENST00000470837 ATXN1P54253 815 aaKnown RBP10.13□□□□□ -0.79
CCM2-204ENST00000470837 PITX1P78337 314 aaPredicted RBP10.13□□□□□ -0.79
CCM2-204ENST00000470837 ATP13A4Q4VNC1 1196 aa10.13□□□□□ -0.79
CCM2-204ENST00000470837 ZC3H12AQ5D1E8 599 aaKnown RBP10.13□□□□□ -0.79
CCM2-204ENST00000470837 LRRC31Q6UY01 552 aa10.13□□□□□ -0.79
CCM2-204ENST00000470837 ADAT2Q7Z6V5 191 aaKnown RBP10.13□□□□□ -0.79
CCM2-204ENST00000470837 ADGRD2Q7Z7M1 963 aa10.13□□□□□ -0.79
CCM2-204ENST00000470837 VSIG1Q86XK7 387 aa10.13□□□□□ -0.79
CCM2-204ENST00000470837 SLC13A5Q86YT5 568 aaPredicted RBP10.13□□□□□ -0.79
CCM2-204ENST00000470837 RASGEF1CQ8N431 466 aa10.13□□□□□ -0.79
CCM2-204ENST00000470837 CCDC185Q8N715 623 aa10.13□□□□□ -0.79
CCM2-204ENST00000470837 TTC13Q8NBP0 860 aa10.13□□□□□ -0.79
CCM2-204ENST00000470837 RAPGEF5Q92565 580 aa10.13□□□□□ -0.79
CCM2-204ENST00000470837 ACSF2Q96CM8 615 aaPredicted RBP10.13□□□□□ -0.79
CCM2-204ENST00000470837 HAPLN3Q96S86 360 aa10.13□□□□□ -0.79
CCM2-204ENST00000470837 PEBP4Q96S96 227 aa10.13□□□□□ -0.79
CCM2-204ENST00000470837 DDX50Q9BQ39 737 aaKnown RBP10.13□□□□□ -0.79
CCM2-204ENST00000470837 ZNF670Q9BS34 389 aa10.13□□□□□ -0.79
CCM2-204ENST00000470837 HEMGNQ9BXL5 484 aa10.13□□□□□ -0.79
CCM2-204ENST00000470837 PRKD2Q9BZL6 878 aa10.13□□□□□ -0.79
CCM2-204ENST00000470837 CCSER2Q9H7U1 834 aa10.13□□□□□ -0.79
CCM2-204ENST00000470837 PRDM16Q9HAZ2 1276 aa10.13□□□□□ -0.79
CCM2-204ENST00000470837 DONSONQ9NYP3 566 aa10.13□□□□□ -0.79
CCM2-204ENST00000470837 LMCD1Q9NZU5 365 aa10.13□□□□□ -0.79
CCM2-204ENST00000470837 RCOR3Q9P2K3 495 aaPredicted RBP10.13□□□□□ -0.79
CCM2-204ENST00000470837 ZMYM5Q9UJ78 669 aa10.13□□□□□ -0.79
CCM2-204ENST00000470837 EFR3BQ9Y2G0 817 aa10.13□□□□□ -0.79
CCM2-204ENST00000470837 CLUHO75153 1309 aa10.12□□□□□ -0.79
CCM2-204ENST00000470837 CEP290O15078 2479 aa10.12□□□□□ -0.79
CCM2-204ENST00000470837 A0A1W2PRU2 124 aa10.12□□□□□ -0.79
CCM2-204ENST00000470837 EPOPA6NHQ4 379 aa10.12□□□□□ -0.79
CCM2-204ENST00000470837 ZNF487B1APH4 448 aa10.12□□□□□ -0.79
CCM2-204ENST00000470837 RFXAPO00287 272 aa10.12□□□□□ -0.79
CCM2-204ENST00000470837 EEF2KO00418 725 aaKnown RBP10.12□□□□□ -0.79
CCM2-204ENST00000470837 APOL1O14791 398 aa10.12□□□□□ -0.79
CCM2-204ENST00000470837 COCHO43405 550 aa10.12□□□□□ -0.79
CCM2-204ENST00000470837 RFPL2O75678 378 aa10.12□□□□□ -0.79
CCM2-204ENST00000470837 TBX18O95935 607 aa10.12□□□□□ -0.79
CCM2-204ENST00000470837 IGLV3-25P01717 112 aa10.12□□□□□ -0.79
CCM2-204ENST00000470837 F11P03951 625 aa10.12□□□□□ -0.79
CCM2-204ENST00000470837 CKMP06732 381 aa10.12□□□□□ -0.79
CCM2-204ENST00000470837 HMBSP08397 361 aa10.12□□□□□ -0.79
CCM2-204ENST00000470837 POU2F2P09086 479 aa10.12□□□□□ -0.79
CCM2-204ENST00000470837 HDCP19113 662 aa10.12□□□□□ -0.79
CCM2-204ENST00000470837 HTR7P34969 479 aa10.12□□□□□ -0.79
CCM2-204ENST00000470837 PTPN7P35236 360 aa10.12□□□□□ -0.79
CCM2-204ENST00000470837 AVPR1AP37288 418 aa10.12□□□□□ -0.79
CCM2-204ENST00000470837 PGFP49763 221 aa10.12□□□□□ -0.79
CCM2-204ENST00000470837 TPI1P60174 286 aa10.12□□□□□ -0.79
CCM2-204ENST00000470837 RING1Q06587 406 aa10.12□□□□□ -0.79
CCM2-204ENST00000470837 SCAPQ12770 1279 aa10.12□□□□□ -0.79
CCM2-204ENST00000470837 DPYSL2Q16555 572 aa10.12□□□□□ -0.79
CCM2-204ENST00000470837 ZNF697Q5TEC3 545 aa10.12□□□□□ -0.79
CCM2-204ENST00000470837 DCAF12L1Q5VU92 463 aa10.12□□□□□ -0.79
CCM2-204ENST00000470837 TXNRD3NBQ6F5E7 133 aa10.12□□□□□ -0.79
CCM2-204ENST00000470837 MFSD7Q6UXD7 560 aa10.12□□□□□ -0.79
CCM2-204ENST00000470837 BZW1Q7L1Q6 419 aaKnown RBP10.12□□□□□ -0.79
CCM2-204ENST00000470837 BNIPLQ7Z465 357 aa10.12□□□□□ -0.79
CCM2-204ENST00000470837 HS6ST3Q8IZP7 471 aa10.12□□□□□ -0.79
CCM2-204ENST00000470837 SPATA4Q8NEY3 305 aa10.12□□□□□ -0.79
CCM2-204ENST00000470837 SMG7Q92540 1137 aaKnown RBP10.12□□□□□ -0.79
CCM2-204ENST00000470837 UBXN4Q92575 508 aa10.12□□□□□ -0.79
CCM2-204ENST00000470837 PLD4Q96BZ4 506 aa10.12□□□□□ -0.79
CCM2-204ENST00000470837 BTN2A3PQ96KV6 586 aa10.12□□□□□ -0.79
CCM2-204ENST00000470837 RUNDC3BQ96NL0 473 aa10.12□□□□□ -0.79
CCM2-204ENST00000470837 AP1M1Q9BXS5 423 aa10.12□□□□□ -0.79
CCM2-204ENST00000470837 SIK2Q9H0K1 926 aa10.12□□□□□ -0.79
CCM2-204ENST00000470837 PCDH18Q9HCL0 1135 aa10.12□□□□□ -0.79
CCM2-204ENST00000470837 ZNF334Q9HCZ1 680 aaPredicted RBP10.12□□□□□ -0.79
CCM2-204ENST00000470837 WDR6Q9NNW5 1121 aaKnown RBP10.12□□□□□ -0.79
CCM2-204ENST00000470837 GPATCH2LQ9NWQ4 482 aa10.12□□□□□ -0.79
CCM2-204ENST00000470837 FEZ2Q9UHY8 353 aaPredicted RBP10.12□□□□□ -0.79
CCM2-204ENST00000470837 LSM7Q9UK45 103 aaKnown RBP10.12□□□□□ -0.79
CCM2-204ENST00000470837 hCG_1818297A0A087WSY0 165 aa10.11□□□□□ -0.79
CCM2-204ENST00000470837 C2orf78A6NCI8 922 aa10.11□□□□□ -0.79
CCM2-204ENST00000470837 EFCAB8A8MWE9 144 aa10.11□□□□□ -0.79
CCM2-204ENST00000470837 KCNU1A8MYU2 1149 aa10.11□□□□□ -0.79
CCM2-204ENST00000470837 CST8O60676 142 aa10.11□□□□□ -0.79
CCM2-204ENST00000470837 RHOP08100 348 aa10.11□□□□□ -0.79
CCM2-204ENST00000470837 L1CAMP32004 1257 aa10.11□□□□□ -0.79
CCM2-204ENST00000470837 CDKN2BP42772 138 aa10.11□□□□□ -0.79
CCM2-204ENST00000470837 DYNLT1P63172 113 aa10.11□□□□□ -0.79
CCM2-204ENST00000470837 CYP4F8P98187 520 aa10.11□□□□□ -0.79
CCM2-204ENST00000470837 ITIH3Q06033 890 aa10.11□□□□□ -0.79
CCM2-204ENST00000470837 DPYSL3Q14195 570 aa10.11□□□□□ -0.79
CCM2-204ENST00000470837 LLGL1Q15334 1064 aa10.11□□□□□ -0.79
CCM2-204ENST00000470837 RAB6CQ53S08 254 aa10.11□□□□□ -0.79
CCM2-204ENST00000470837 TCEAL5Q5H9L2 206 aa10.11□□□□□ -0.79
CCM2-204ENST00000470837 GPR158Q5T848 1215 aa10.11□□□□□ -0.79
CCM2-204ENST00000470837 OTUD1Q5VV17 481 aaPredicted RBP10.11□□□□□ -0.79
CCM2-204ENST00000470837 TXNDC8Q6A555 127 aa10.11□□□□□ -0.79
CCM2-204ENST00000470837 RWDD4Q6NW29 188 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms