RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 LEXMQ3ZCV2 418 aa11.6□□□□□ -0.55
VCP-204ENST00000466100 MIB1Q86YT6 1006 aa11.6□□□□□ -0.55
VCP-204ENST00000466100 MAFAQ8NHW3 353 aaPredicted RBP11.6□□□□□ -0.55
VCP-204ENST00000466100 RIN3Q8TB24 985 aa11.6□□□□□ -0.55
VCP-204ENST00000466100 PPM1EQ8WY54 764 aa11.6□□□□□ -0.55
VCP-204ENST00000466100 USP13Q92995 863 aaPredicted RBP11.6□□□□□ -0.55
VCP-204ENST00000466100 CD101Q93033 1021 aa11.6□□□□□ -0.55
VCP-204ENST00000466100 HLA-CQ95604 372 aa11.6□□□□□ -0.55
VCP-204ENST00000466100 WBP2Q969T9 261 aa11.6□□□□□ -0.55
VCP-204ENST00000466100 PEBP4Q96S96 227 aa11.6□□□□□ -0.55
VCP-204ENST00000466100 GDE1Q9NZC3 331 aa11.6□□□□□ -0.55
VCP-204ENST00000466100 CDH7Q9ULB5 785 aa11.6□□□□□ -0.55
VCP-204ENST00000466100 CCL26Q9Y258 94 aa11.6□□□□□ -0.55
VCP-204ENST00000466100 HBS1LQ9Y450 684 aaKnown RBP11.6□□□□□ -0.55
VCP-204ENST00000466100 CPQQ9Y646 472 aa11.6□□□□□ -0.55
VCP-204ENST00000466100 SLC12A8A0AV02 714 aa11.59□□□□□ -0.55
VCP-204ENST00000466100 TMEM110-MUSTN1A8MSY1 372 aa11.59□□□□□ -0.55
VCP-204ENST00000466100 KCNU1A8MYU2 1149 aa11.59□□□□□ -0.55
VCP-204ENST00000466100 STC2O76061 302 aa11.59□□□□□ -0.55
VCP-204ENST00000466100 F9P00740 461 aa11.59□□□□□ -0.55
VCP-204ENST00000466100 CKMP06732 381 aa11.59□□□□□ -0.55
VCP-204ENST00000466100 MBL2P11226 248 aaPredicted RBP11.59□□□□□ -0.55
VCP-204ENST00000466100 COMTP21964 271 aa11.59□□□□□ -0.55
VCP-204ENST00000466100 IL1R2P27930 398 aa11.59□□□□□ -0.55
VCP-204ENST00000466100 KCNQ1P51787 676 aa11.59□□□□□ -0.55
VCP-204ENST00000466100 TBX4P57082 545 aa11.59□□□□□ -0.55
VCP-204ENST00000466100 DEUP1Q05D60 604 aa11.59□□□□□ -0.55
VCP-204ENST00000466100 SCAPQ12770 1279 aa11.59□□□□□ -0.55
VCP-204ENST00000466100 NME3Q13232 169 aa11.59□□□□□ -0.55
VCP-204ENST00000466100 PPP2R5DQ14738 602 aa11.59□□□□□ -0.55
VCP-204ENST00000466100 SKIV2LQ15477 1246 aaKnown RBP11.59□□□□□ -0.55
VCP-204ENST00000466100 ZNF77Q15935 545 aa11.59□□□□□ -0.55
VCP-204ENST00000466100 ZC3H12AQ5D1E8 599 aaKnown RBP11.59□□□□□ -0.55
VCP-204ENST00000466100 ARTNQ5T4W7 220 aa11.59□□□□□ -0.55
VCP-204ENST00000466100 TXNRD3NBQ6F5E7 133 aa11.59□□□□□ -0.55
VCP-204ENST00000466100 CC2D1AQ6P1N0 951 aaPredicted RBP11.59□□□□□ -0.55
VCP-204ENST00000466100 DAAM2Q86T65 1068 aa11.59□□□□□ -0.55
VCP-204ENST00000466100 NT5DC3Q86UY8 548 aa11.59□□□□□ -0.55
VCP-204ENST00000466100 FAM131BQ86XD5 332 aa11.59□□□□□ -0.55
VCP-204ENST00000466100 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.59□□□□□ -0.55
VCP-204ENST00000466100 PLD4Q96BZ4 506 aa11.59□□□□□ -0.55
VCP-204ENST00000466100 RSPRY1Q96DX4 576 aa11.59□□□□□ -0.55
VCP-204ENST00000466100 ASB16Q96NS5 453 aa11.59□□□□□ -0.55
VCP-204ENST00000466100 SMG9Q9H0W8 520 aaKnown RBP11.59□□□□□ -0.55
VCP-204ENST00000466100 SLITRK6Q9H5Y7 841 aa11.59□□□□□ -0.55
VCP-204ENST00000466100 TRPV4Q9HBA0 871 aa11.59□□□□□ -0.55
VCP-204ENST00000466100 GKN1Q9NS71 199 aa11.59□□□□□ -0.55
VCP-204ENST00000466100 TMEM51Q9NW97 253 aa11.59□□□□□ -0.55
VCP-204ENST00000466100 SMPD4Q9NXE4 827 aa11.59□□□□□ -0.55
VCP-204ENST00000466100 ARHGEF38Q9NXL2 777 aa11.59□□□□□ -0.55
VCP-204ENST00000466100 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.59□□□□□ -0.55
VCP-204ENST00000466100 HYOU1Q9Y4L1 999 aa11.59□□□□□ -0.55
VCP-204ENST00000466100 ALG6Q9Y672 507 aa11.59□□□□□ -0.55
VCP-204ENST00000466100 COL4A2P08572 1712 aa11.59□□□□□ -0.55
VCP-204ENST00000466100 BDP1A6H8Y1 2624 aa11.59□□□□□ -0.55
VCP-204ENST00000466100 MYO10Q9HD67 2058 aa11.59□□□□□ -0.55
VCP-204ENST00000466100 CHD5Q8TDI0 1954 aa11.59□□□□□ -0.55
VCP-204ENST00000466100 SYNJ2BP-COX16A0A087WUM0 186 aa11.58□□□□□ -0.56
VCP-204ENST00000466100 RNF8O76064 485 aa11.58□□□□□ -0.56
VCP-204ENST00000466100 KLKB1P03952 638 aa11.58□□□□□ -0.56
VCP-204ENST00000466100 GBP1P32455 592 aa11.58□□□□□ -0.56
VCP-204ENST00000466100 AVPR1AP37288 418 aa11.58□□□□□ -0.56
VCP-204ENST00000466100 SLC1A1P43005 524 aa11.58□□□□□ -0.56
VCP-204ENST00000466100 KPNA1P52294 538 aaPredicted RBP11.58□□□□□ -0.56
VCP-204ENST00000466100 NAP1L1P55209 391 aaKnown RBP11.58□□□□□ -0.56
VCP-204ENST00000466100 COG7P83436 770 aa11.58□□□□□ -0.56
VCP-204ENST00000466100 SMAD2Q15796 467 aaKnown RBP11.58□□□□□ -0.56
VCP-204ENST00000466100 FAM78AQ5JUQ0 283 aa11.58□□□□□ -0.56
VCP-204ENST00000466100 BRMS1LQ5PSV4 323 aa11.58□□□□□ -0.56
VCP-204ENST00000466100 Q6ZNB5 142 aa11.58□□□□□ -0.56
VCP-204ENST00000466100 NYAP1Q6ZVC0 841 aa11.58□□□□□ -0.56
VCP-204ENST00000466100 ZSCAN30Q86W11 494 aa11.58□□□□□ -0.56
VCP-204ENST00000466100 ARID3BQ8IVW6 561 aaPredicted RBP11.58□□□□□ -0.56
VCP-204ENST00000466100 CCDC185Q8N715 623 aa11.58□□□□□ -0.56
VCP-204ENST00000466100 TRIM58Q8NG06 486 aa11.58□□□□□ -0.56
VCP-204ENST00000466100 ZSCAN18Q8TBC5 510 aaPredicted RBP11.58□□□□□ -0.56
VCP-204ENST00000466100 SMARCD2Q92925 531 aa11.58□□□□□ -0.56
VCP-204ENST00000466100 NTAN1Q96AB6 310 aa11.58□□□□□ -0.56
VCP-204ENST00000466100 LRRC3BQ96PB8 259 aa11.58□□□□□ -0.56
VCP-204ENST00000466100 NCAPGQ9BPX3 1015 aa11.58□□□□□ -0.56
VCP-204ENST00000466100 NACA2Q9H009 215 aa11.58□□□□□ -0.56
VCP-204ENST00000466100 KIF9Q9HAQ2 790 aa11.58□□□□□ -0.56
VCP-204ENST00000466100 PRDM6Q9NQX0 595 aa11.58□□□□□ -0.56
VCP-204ENST00000466100 TDP1Q9NUW8 608 aa11.58□□□□□ -0.56
VCP-204ENST00000466100 COX16Q9P0S2 106 aa11.58□□□□□ -0.56
VCP-204ENST00000466100 EPS15L1Q9UBC2 864 aa11.58□□□□□ -0.56
VCP-204ENST00000466100 USP18Q9UMW8 372 aa11.58□□□□□ -0.56
VCP-204ENST00000466100 USTQ9Y2C2 406 aa11.58□□□□□ -0.56
VCP-204ENST00000466100 ZFP37Q9Y6Q3 630 aaPredicted RBP11.58□□□□□ -0.56
VCP-204ENST00000466100 MUC3AQ02505 3323 aa11.57□□□□□ -0.56
VCP-204ENST00000466100 NCOR1O75376 2440 aa11.57□□□□□ -0.56
VCP-204ENST00000466100 LEFTY2O00292 366 aa11.57□□□□□ -0.56
VCP-204ENST00000466100 FANCGO15287 622 aa11.57□□□□□ -0.56
VCP-204ENST00000466100 FTCDO95954 541 aa11.57□□□□□ -0.56
VCP-204ENST00000466100 HMBSP08397 361 aa11.57□□□□□ -0.56
VCP-204ENST00000466100 LAMP2P13473 410 aa11.57□□□□□ -0.56
VCP-204ENST00000466100 CCR1P32246 355 aa11.57□□□□□ -0.56
VCP-204ENST00000466100 ADRA1BP35368 520 aa11.57□□□□□ -0.56
VCP-204ENST00000466100 MARCKSL1P49006 195 aa11.57□□□□□ -0.56
VCP-204ENST00000466100 LRRC38Q5VT99 294 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms