RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 IGHV4-34P06331 123 aa15.77■□□□□ 0.12
HDAC6-214ENST00000465269 CSRP3P50461 194 aa15.77■□□□□ 0.12
HDAC6-214ENST00000465269 TUBP50607 506 aa15.77■□□□□ 0.12
HDAC6-214ENST00000465269 C21orf59P57076 290 aa15.77■□□□□ 0.12
HDAC6-214ENST00000465269 INSM1Q01101 510 aaPredicted RBP15.77■□□□□ 0.12
HDAC6-214ENST00000465269 FYB2Q5VWT5 728 aa15.77■□□□□ 0.12
HDAC6-214ENST00000465269 SERPINA13PQ6UXR4 307 aa15.77■□□□□ 0.12
HDAC6-214ENST00000465269 FAM35AQ86V20 835 aa15.77■□□□□ 0.12
HDAC6-214ENST00000465269 RBBP8NLQ8NC74 664 aaPredicted RBP15.77■□□□□ 0.12
HDAC6-214ENST00000465269 ZNF248Q8NDW4 579 aa15.77■□□□□ 0.12
HDAC6-214ENST00000465269 MED10Q9BTT4 135 aa15.77■□□□□ 0.12
HDAC6-214ENST00000465269 EBF2Q9HAK2 575 aa15.77■□□□□ 0.12
HDAC6-214ENST00000465269 OSGEPQ9NPF4 335 aa15.77■□□□□ 0.12
HDAC6-214ENST00000465269 ELOVL2Q9NXB9 296 aa15.77■□□□□ 0.12
HDAC6-214ENST00000465269 IL37Q9NZH6 218 aa15.77■□□□□ 0.12
HDAC6-214ENST00000465269 IL17BQ9UHF5 180 aa15.77■□□□□ 0.12
HDAC6-214ENST00000465269 LSM7Q9UK45 103 aaKnown RBP15.77■□□□□ 0.12
HDAC6-214ENST00000465269 CLCA2Q9UQC9 943 aa15.77■□□□□ 0.12
HDAC6-214ENST00000465269 SLC27A6Q9Y2P4 619 aa15.77■□□□□ 0.12
HDAC6-214ENST00000465269 USP9YO00507 2555 aaPredicted RBP15.76■□□□□ 0.11
HDAC6-214ENST00000465269 KLK10O43240 276 aa15.76■□□□□ 0.11
HDAC6-214ENST00000465269 KLKB1P03952 638 aa15.76■□□□□ 0.11
HDAC6-214ENST00000465269 L1TD1Q5T7N2 865 aaKnown RBP15.76■□□□□ 0.11
HDAC6-214ENST00000465269 Q6ZNB5 142 aa15.76■□□□□ 0.11
HDAC6-214ENST00000465269 GPRIN1Q7Z2K8 1008 aa15.76■□□□□ 0.11
HDAC6-214ENST00000465269 CBWD2Q8IUF1 395 aa15.76■□□□□ 0.11
HDAC6-214ENST00000465269 KCTD17Q8N5Z5 321 aa15.76■□□□□ 0.11
HDAC6-214ENST00000465269 FAM184AQ8NB25 1140 aa15.76■□□□□ 0.11
HDAC6-214ENST00000465269 ZMIZ2Q8NF64 920 aa15.76■□□□□ 0.11
HDAC6-214ENST00000465269 OR2T3Q8NH03 318 aa15.76■□□□□ 0.11
HDAC6-214ENST00000465269 CYB5D2Q8WUJ1 264 aa15.76■□□□□ 0.11
HDAC6-214ENST00000465269 MED8Q96G25 268 aa15.76■□□□□ 0.11
HDAC6-214ENST00000465269 CALML4Q96GE6 196 aa15.76■□□□□ 0.11
HDAC6-214ENST00000465269 PIWIL1Q96J94 861 aaKnown RBP15.76■□□□□ 0.11
HDAC6-214ENST00000465269 HIC2Q96JB3 615 aa15.76■□□□□ 0.11
HDAC6-214ENST00000465269 ACCSQ96QU6 501 aa15.76■□□□□ 0.11
HDAC6-214ENST00000465269 ACE2Q9BYF1 805 aaPredicted RBP15.76■□□□□ 0.11
HDAC6-214ENST00000465269 PCED1AQ9H1Q7 454 aa15.76■□□□□ 0.11
HDAC6-214ENST00000465269 MRPL44Q9H9J2 332 aaKnown RBP15.76■□□□□ 0.11
HDAC6-214ENST00000465269 NMUR1Q9HB89 426 aa15.76■□□□□ 0.11
HDAC6-214ENST00000465269 NXF1Q9UBU9 619 aaKnown RBP15.76■□□□□ 0.11
HDAC6-214ENST00000465269 CYP26A1O43174 497 aa15.75■□□□□ 0.11
HDAC6-214ENST00000465269 PENKP01210 267 aaPredicted RBP15.75■□□□□ 0.11
HDAC6-214ENST00000465269 TNNC2P02585 160 aa15.75■□□□□ 0.11
HDAC6-214ENST00000465269 HMBSP08397 361 aa15.75■□□□□ 0.11
HDAC6-214ENST00000465269 C1SP09871 688 aa15.75■□□□□ 0.11
HDAC6-214ENST00000465269 UBA7P41226 1012 aa15.75■□□□□ 0.11
HDAC6-214ENST00000465269 PCBP4P57723 403 aaKnown RBP15.75■□□□□ 0.11
HDAC6-214ENST00000465269 NFATC3Q12968 1075 aa15.75■□□□□ 0.11
HDAC6-214ENST00000465269 BROXQ5VW32 411 aa15.75■□□□□ 0.11
HDAC6-214ENST00000465269 RASSF8Q8NHQ8 419 aa15.75■□□□□ 0.11
HDAC6-214ENST00000465269 JAKMIP2Q96AA8 810 aa15.75■□□□□ 0.11
HDAC6-214ENST00000465269 SMOQ99835 787 aa15.75■□□□□ 0.11
HDAC6-214ENST00000465269 BTBD1Q9H0C5 482 aa15.75■□□□□ 0.11
HDAC6-214ENST00000465269 MTG2Q9H4K7 406 aa15.75■□□□□ 0.11
HDAC6-214ENST00000465269 SMYD3Q9H7B4 428 aa15.75■□□□□ 0.11
HDAC6-214ENST00000465269 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.75■□□□□ 0.111e-15■■■■■ 67.3
HDAC6-214ENST00000465269 KRT82Q9NSB4 513 aa15.75■□□□□ 0.11
HDAC6-214ENST00000465269 FAM92AA1XBS5 289 aa15.74■□□□□ 0.11
HDAC6-214ENST00000465269 VILLO15195 856 aa15.74■□□□□ 0.11
HDAC6-214ENST00000465269 TACC1O75410 805 aa15.74■□□□□ 0.11
HDAC6-214ENST00000465269 AP1G2O75843 785 aa15.74■□□□□ 0.11
HDAC6-214ENST00000465269 STC2O76061 302 aa15.74■□□□□ 0.11
HDAC6-214ENST00000465269 PRPF6O94906 941 aaKnown RBP15.74■□□□□ 0.11
HDAC6-214ENST00000465269 GCNT3O95395 438 aa15.74■□□□□ 0.11
HDAC6-214ENST00000465269 CCDC130P13994 396 aa15.74■□□□□ 0.11
HDAC6-214ENST00000465269 GARTP22102 1010 aa15.74■□□□□ 0.11
HDAC6-214ENST00000465269 BCAT1P54687 386 aa15.74■□□□□ 0.11
HDAC6-214ENST00000465269 ANAPC15P60006 121 aa15.74■□□□□ 0.11
HDAC6-214ENST00000465269 RPS14P62263 151 aaKnown RBP15.74■□□□□ 0.11
HDAC6-214ENST00000465269 WDR72Q3MJ13 1102 aa15.74■□□□□ 0.11
HDAC6-214ENST00000465269 MCTP1Q6DN14 999 aa15.74■□□□□ 0.11
HDAC6-214ENST00000465269 TRAPPC11Q7Z392 1133 aa15.74■□□□□ 0.11
HDAC6-214ENST00000465269 ANKS1BQ7Z6G8 1248 aa15.74■□□□□ 0.11
HDAC6-214ENST00000465269 DHX40Q8IX18 779 aaKnown RBP15.74■□□□□ 0.11
HDAC6-214ENST00000465269 SYCP3Q8IZU3 236 aa15.74■□□□□ 0.11
HDAC6-214ENST00000465269 DCBLD1Q8N8Z6 715 aa15.74■□□□□ 0.11
HDAC6-214ENST00000465269 UCMAQ8WVF2 138 aa15.74■□□□□ 0.11
HDAC6-214ENST00000465269 HVCN1Q96D96 273 aa15.74■□□□□ 0.11
HDAC6-214ENST00000465269 CAAP1Q9H8G2 361 aa15.74■□□□□ 0.11
HDAC6-214ENST00000465269 DMAP1Q9NPF5 467 aaPredicted RBP15.74■□□□□ 0.11
HDAC6-214ENST00000465269 LDHAP00338 332 aaKnown RBP15.73■□□□□ 0.11
HDAC6-214ENST00000465269 MT-CO3P00414 261 aa15.73■□□□□ 0.11
HDAC6-214ENST00000465269 EPHA8P29322 1005 aaPredicted RBP15.73■□□□□ 0.11
HDAC6-214ENST00000465269 ABCD1P33897 745 aa15.73■□□□□ 0.11
HDAC6-214ENST00000465269 ATP5C1P36542 298 aaKnown RBP15.73■□□□□ 0.11
HDAC6-214ENST00000465269 ZNF132P52740 706 aa15.73■□□□□ 0.11
HDAC6-214ENST00000465269 VAC14Q08AM6 782 aa15.73■□□□□ 0.11
HDAC6-214ENST00000465269 CAMK2GQ13555 558 aaPredicted RBP15.73■□□□□ 0.11
HDAC6-214ENST00000465269 DUOXA2Q1HG44 320 aa15.73■□□□□ 0.11
HDAC6-214ENST00000465269 FNDC3BQ53EP0 1204 aaKnown RBP15.73■□□□□ 0.11
HDAC6-214ENST00000465269 C6orf132Q5T0Z8 1188 aa15.73■□□□□ 0.11
HDAC6-214ENST00000465269 FUKQ8N0W3 1084 aa15.73■□□□□ 0.11
HDAC6-214ENST00000465269 KRI1Q8N9T8 703 aaKnown RBP15.73■□□□□ 0.11
HDAC6-214ENST00000465269 KCNE4Q8WWG9 221 aa15.73■□□□□ 0.11
HDAC6-214ENST00000465269 LARP4BQ92615 738 aaKnown RBP15.73■□□□□ 0.11
HDAC6-214ENST00000465269 AASDHPPTQ9NRN7 309 aa15.73■□□□□ 0.11
HDAC6-214ENST00000465269 SERGEFQ9UGK8 458 aa15.73■□□□□ 0.11
HDAC6-214ENST00000465269 NBASA2RRP1 2371 aa15.72■□□□□ 0.11
HDAC6-214ENST00000465269 A0A1W2PQH9 124 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms