RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 TAPT1Q6NXT6 567 aa5.59□□□□□ -1.51
COPS3-204ENST00000462236 ZNF529Q6P280 563 aa5.59□□□□□ -1.51
COPS3-204ENST00000462236 DARS2Q6PI48 645 aaKnown RBP5.59□□□□□ -1.51
COPS3-204ENST00000462236 MAEAQ7L5Y9 396 aa5.59□□□□□ -1.51
COPS3-204ENST00000462236 TLK2Q86UE8 772 aa5.59□□□□□ -1.51
COPS3-204ENST00000462236 SGMS1Q86VZ5 419 aa5.59□□□□□ -1.51
COPS3-204ENST00000462236 FAM90A1Q86YD7 464 aa5.59□□□□□ -1.51
COPS3-204ENST00000462236 PDSS2Q86YH6 399 aa5.59□□□□□ -1.51
COPS3-204ENST00000462236 BRIX1Q8TDN6 353 aaKnown RBP5.59□□□□□ -1.51
COPS3-204ENST00000462236 MORC4Q8TE76 937 aa5.59□□□□□ -1.51
COPS3-204ENST00000462236 GDPD5Q8WTR4 605 aa5.59□□□□□ -1.51
COPS3-204ENST00000462236 SLC35A4Q96G79 324 aa5.59□□□□□ -1.51
COPS3-204ENST00000462236 CCDC17Q96LX7 622 aa5.59□□□□□ -1.51
COPS3-204ENST00000462236 CTAGE1Q96RT6 745 aa5.59□□□□□ -1.51
COPS3-204ENST00000462236 PACSIN1Q9BY11 444 aa5.59□□□□□ -1.51
COPS3-204ENST00000462236 B3GNT5Q9BYG0 378 aa5.59□□□□□ -1.51
COPS3-204ENST00000462236 ZNF700Q9H0M5 742 aa5.59□□□□□ -1.51
COPS3-204ENST00000462236 SH2D4AQ9H788 454 aa5.59□□□□□ -1.51
COPS3-204ENST00000462236 CFAP97Q9P2B7 532 aa5.59□□□□□ -1.51
COPS3-204ENST00000462236 FNDC1Q4ZHG4 1894 aaPredicted RBP5.59□□□□□ -1.51
COPS3-204ENST00000462236 DOCK8Q8NF50 2099 aa5.59□□□□□ -1.52
COPS3-204ENST00000462236 EVPLQ92817 2033 aa5.58□□□□□ -1.52
COPS3-204ENST00000462236 WDR81Q562E7 1941 aa5.58□□□□□ -1.52
COPS3-204ENST00000462236 CCDC194A0A1B0GVG4 234 aa5.58□□□□□ -1.52
COPS3-204ENST00000462236 KRTAP23-1A1A580 65 aa5.58□□□□□ -1.52
COPS3-204ENST00000462236 ANO9A1A5B4 782 aa5.58□□□□□ -1.52
COPS3-204ENST00000462236 LRRC14BA6NHZ5 514 aa5.58□□□□□ -1.52
COPS3-204ENST00000462236 GRM6O15303 877 aa5.58□□□□□ -1.52
COPS3-204ENST00000462236 PHGDHO43175 533 aaKnown RBP5.58□□□□□ -1.52
COPS3-204ENST00000462236 HAUS5O94927 633 aa5.58□□□□□ -1.52
COPS3-204ENST00000462236 CD1AP06126 327 aa5.58□□□□□ -1.52
COPS3-204ENST00000462236 IQCF3P0C7M6 154 aa5.58□□□□□ -1.52
COPS3-204ENST00000462236 CYP2D6P10635 497 aa5.58□□□□□ -1.52
COPS3-204ENST00000462236 CYP2C9P11712 490 aa5.58□□□□□ -1.52
COPS3-204ENST00000462236 EEF2P13639 858 aaKnown RBP5.58□□□□□ -1.52
COPS3-204ENST00000462236 ACO1P21399 889 aaKnown RBP5.58□□□□□ -1.52
COPS3-204ENST00000462236 PIK3CGP48736 1102 aa5.58□□□□□ -1.52
COPS3-204ENST00000462236 SELENOPP49908 381 aa5.58□□□□□ -1.52
COPS3-204ENST00000462236 WDR5P61964 334 aaKnown RBP5.58□□□□□ -1.52
COPS3-204ENST00000462236 PSMC6P62333 389 aa5.58□□□□□ -1.52
COPS3-204ENST00000462236 CNTN2Q02246 1040 aa5.58□□□□□ -1.52
COPS3-204ENST00000462236 TNFAIP2Q03169 654 aa5.58□□□□□ -1.52
COPS3-204ENST00000462236 G3BP1Q13283 466 aaKnown RBP eCLIP5.58□□□□□ -1.52
COPS3-204ENST00000462236 GALEQ14376 348 aa5.58□□□□□ -1.52
COPS3-204ENST00000462236 HERC4Q5GLZ8 1057 aaPredicted RBP5.58□□□□□ -1.52
COPS3-204ENST00000462236 FAM83BQ5T0W9 1011 aa5.58□□□□□ -1.52
COPS3-204ENST00000462236 TMEM63BQ5T3F8 832 aa5.58□□□□□ -1.52
COPS3-204ENST00000462236 ANKS6Q68DC2 871 aa5.58□□□□□ -1.52
COPS3-204ENST00000462236 SNRNP48Q6IEG0 339 aaKnown RBP5.58□□□□□ -1.52
COPS3-204ENST00000462236 DEFB128Q7Z7B8 93 aa5.58□□□□□ -1.52
COPS3-204ENST00000462236 ELOA2Q8IYF1 753 aaPredicted RBP5.58□□□□□ -1.52
COPS3-204ENST00000462236 CHST13Q8NET6 341 aa5.58□□□□□ -1.52
COPS3-204ENST00000462236 FBXO18Q8NFZ0 1043 aa5.58□□□□□ -1.52
COPS3-204ENST00000462236 SSH3Q8TE77 659 aa5.58□□□□□ -1.52
COPS3-204ENST00000462236 ARHGAP45Q92619 1136 aa5.58□□□□□ -1.52
COPS3-204ENST00000462236 RAB24Q969Q5 203 aa5.58□□□□□ -1.52
COPS3-204ENST00000462236 DYNLL2Q96FJ2 89 aa5.58□□□□□ -1.52
COPS3-204ENST00000462236 C20orf173Q96LM9 149 aa5.58□□□□□ -1.52
COPS3-204ENST00000462236 SLF1Q9BQI6 1058 aa5.58□□□□□ -1.52
COPS3-204ENST00000462236 API5Q9BZZ5 524 aaKnown RBP5.58□□□□□ -1.52
COPS3-204ENST00000462236 MRPL46Q9H2W6 279 aaKnown RBP5.58□□□□□ -1.52
COPS3-204ENST00000462236 SLC38A10Q9HBR0 1119 aa5.58□□□□□ -1.52
COPS3-204ENST00000462236 SARS2Q9NP81 518 aaKnown RBP5.58□□□□□ -1.52
COPS3-204ENST00000462236 TRMT13Q9NUP7 481 aaKnown RBP5.58□□□□□ -1.52
COPS3-204ENST00000462236 MCM9Q9NXL9 1143 aa5.58□□□□□ -1.52
COPS3-204ENST00000462236 RUVBL1Q9Y265 456 aaKnown RBP5.58□□□□□ -1.52
COPS3-204ENST00000462236 TCAF1Q9Y4C2 921 aa5.58□□□□□ -1.52
COPS3-204ENST00000462236 RALGAPA1Q6GYQ0 2036 aa5.57□□□□□ -1.52
COPS3-204ENST00000462236 FRYLO94915 3013 aa5.57□□□□□ -1.52
COPS3-204ENST00000462236 IGKV6D-41A0A0C4DH26 115 aa5.57□□□□□ -1.52
COPS3-204ENST00000462236 LINC01553A4QN01 128 aa5.57□□□□□ -1.52
COPS3-204ENST00000462236 A6NNZ2 444 aa5.57□□□□□ -1.52
COPS3-204ENST00000462236 KIF28PB7ZC32 967 aa5.57□□□□□ -1.52
COPS3-204ENST00000462236 PROB1E7EW31 1015 aa5.57□□□□□ -1.52
COPS3-204ENST00000462236 MPHOSPH10O00566 681 aaKnown RBP5.57□□□□□ -1.52
COPS3-204ENST00000462236 IDH1O75874 414 aaKnown RBP5.57□□□□□ -1.52
COPS3-204ENST00000462236 GJB5O95377 273 aa5.57□□□□□ -1.52
COPS3-204ENST00000462236 CXCL10P02778 98 aa5.57□□□□□ -1.52
COPS3-204ENST00000462236 SUPT20HL2P0C7V6 817 aa5.57□□□□□ -1.52
COPS3-204ENST00000462236 ACTN1P12814 892 aa5.57□□□□□ -1.52
COPS3-204ENST00000462236 KCNA5P22460 613 aa5.57□□□□□ -1.52
COPS3-204ENST00000462236 MAN2A2P49641 1150 aa5.57□□□□□ -1.52
COPS3-204ENST00000462236 OAZ1P54368 228 aa5.57□□□□□ -1.52
COPS3-204ENST00000462236 DEFB103AP81534 67 aa5.57□□□□□ -1.52
COPS3-204ENST00000462236 PLP2Q04941 152 aa5.57□□□□□ -1.52
COPS3-204ENST00000462236 ICAM4Q14773 271 aa5.57□□□□□ -1.52
COPS3-204ENST00000462236 TCTN1Q2MV58 587 aa5.57□□□□□ -1.52
COPS3-204ENST00000462236 C12orf60Q5U649 245 aa5.57□□□□□ -1.52
COPS3-204ENST00000462236 CCDC149Q6ZUS6 474 aa5.57□□□□□ -1.52
COPS3-204ENST00000462236 XYLT1Q86Y38 959 aa5.57□□□□□ -1.52
COPS3-204ENST00000462236 ADHFE1Q8IWW8 467 aa5.57□□□□□ -1.52
COPS3-204ENST00000462236 FITM2Q8N6M3 262 aa5.57□□□□□ -1.52
COPS3-204ENST00000462236 PJA1Q8NG27 643 aa5.57□□□□□ -1.52
COPS3-204ENST00000462236 OR10H5Q8NGA6 315 aa5.57□□□□□ -1.52
COPS3-204ENST00000462236 SDR42E1Q8WUS8 393 aa5.57□□□□□ -1.52
COPS3-204ENST00000462236 TGS1Q96RS0 853 aaKnown RBP5.57□□□□□ -1.52
COPS3-204ENST00000462236 DCLRE1CQ96SD1 692 aaKnown RBP5.57□□□□□ -1.52
COPS3-204ENST00000462236 CDK5RAP1Q96SZ6 601 aaKnown RBP5.57□□□□□ -1.52
COPS3-204ENST00000462236 BDH2Q9BUT1 245 aa5.57□□□□□ -1.52
COPS3-204ENST00000462236 CPEB1Q9BZB8 566 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms