RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 FAM172AQ8WUF8 416 aa11.14□□□□□ -0.63
PKP4-206ENST00000452162 VN1R3Q9BXE9 311 aa11.14□□□□□ -0.63
PKP4-206ENST00000452162 B3GNT5Q9BYG0 378 aa11.14□□□□□ -0.63
PKP4-206ENST00000452162 CYLDQ9NQC7 956 aa11.14□□□□□ -0.63
PKP4-206ENST00000452162 EURLQ9NYK6 297 aa11.14□□□□□ -0.63
PKP4-206ENST00000452162 CTNNAL1Q9UBT7 734 aa11.14□□□□□ -0.63
PKP4-206ENST00000452162 PDGFRBP09619 1106 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 LRPAP1P30533 357 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 SDC4P31431 198 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 RPL22P35268 128 aaKnown RBP11.13□□□□□ -0.63
PKP4-206ENST00000452162 IRS1P35568 1242 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 PPM1AP35813 382 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 ATP11AP98196 1134 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 NOMO1Q15155 1222 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 CCDC38Q502W7 563 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 BOLA3Q53S33 107 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 TAOK1Q7L7X3 1001 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 PCGF5Q86SE9 256 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 TMEM169Q96HH4 297 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 TTC25Q96NG3 672 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 SNX25Q9H3E2 840 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 VWA8A3KMH1 1905 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 C5orf60A6NFR6 353 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 MCF2LO15068 1137 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 ALOX15BO15296 676 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 POU3F3P20264 500 aaPredicted RBP11.13□□□□□ -0.63
PKP4-206ENST00000452162 WARSP23381 471 aaKnown RBP11.13□□□□□ -0.63
PKP4-206ENST00000452162 IL4RP24394 825 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 ADORA2BP29275 332 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 PTPN9P43378 593 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 CLCNKBP51801 687 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 LILRA4P59901 499 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 ERVFC1P60507 584 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 TFDP2Q14188 446 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 FASTKD3Q14CZ7 662 aaKnown RBP11.13□□□□□ -0.63
PKP4-206ENST00000452162 PDK2Q15119 407 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 NPNTQ6UXI9 565 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 B4GALNT4Q76KP1 1039 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 SLC26A9Q7LBE3 791 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 OSTM1Q86WC4 334 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 VSIG1Q86XK7 387 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 ADGRF2Q8IZF7 708 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 MICALL1Q8N3F8 863 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 NAT8LQ8N9F0 302 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 APPL2Q8NEU8 664 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 HASPINQ8TF76 798 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 CLEC4CQ8WTT0 213 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 RSAD2Q8WXG1 361 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 CPT1BQ92523 772 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 MRPL38Q96DV4 380 aaKnown RBP11.13□□□□□ -0.63
PKP4-206ENST00000452162 RNF157Q96PX1 679 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 TBCBQ99426 244 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 PHACTR1Q9C0D0 580 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 NGRNQ9NPE2 291 aaKnown RBP11.13□□□□□ -0.63
PKP4-206ENST00000452162 GPATCH2LQ9NWQ4 482 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 UNC80Q8N2C7 3258 aa11.13□□□□□ -0.63
PKP4-206ENST00000452162 A0A087WUV0 522 aaPredicted RBP11.12□□□□□ -0.63
PKP4-206ENST00000452162 TKTP29401 623 aaKnown RBP11.12□□□□□ -0.63
PKP4-206ENST00000452162 ATP5DP30049 168 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 HDAC4P56524 1084 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 ANKRD22Q5VYY1 191 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 ARCQ7LC44 396 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 PPIL6Q8IXY8 311 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 TOP6BLQ8N6T0 577 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 C3orf58Q8NDZ4 430 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 SPATA18Q8TC71 538 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 CENPIQ92674 756 aaPredicted RBP11.12□□□□□ -0.63
PKP4-206ENST00000452162 ARHGEF2Q92974 986 aaKnown RBP11.12□□□□□ -0.63
PKP4-206ENST00000452162 NCAPGQ9BPX3 1015 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 SNRNP25Q9BV90 132 aaKnown RBP11.12□□□□□ -0.63
PKP4-206ENST00000452162 CCDC134Q9H6E4 229 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 PCDH18Q9HCL0 1135 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 SLC38A7Q9NVC3 462 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 ATXN2Q99700 1313 aaKnown RBP11.12□□□□□ -0.63
PKP4-206ENST00000452162 ZNF487B1APH4 448 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 MDM4O15151 490 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 CDH16O75309 829 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 RBP3P10745 1247 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 TFE3P19532 575 aaPredicted RBP11.12□□□□□ -0.63
PKP4-206ENST00000452162 DRD4P21917 467 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 ROR1Q01973 937 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 UBE3AQ05086 875 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 GAD2Q05329 585 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 KRT81Q14533 505 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 CCDC85BQ15834 202 aaPredicted RBP11.12□□□□□ -0.63
PKP4-206ENST00000452162 QPCTQ16769 361 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 CA9Q16790 459 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 UPP1Q16831 310 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 ZC3H12AQ5D1E8 599 aaKnown RBP11.12□□□□□ -0.63
PKP4-206ENST00000452162 VSTM1Q6UX27 236 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 CD300LGQ6UXG3 332 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 CENPUQ71F23 418 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 TAS1R1Q7RTX1 841 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 SPATS2Q86XZ4 545 aaKnown RBP11.12□□□□□ -0.63
PKP4-206ENST00000452162 MAP7D3Q8IWC1 876 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 CYP4X1Q8N118 509 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 VPS52Q8N1B4 723 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 PQLC3Q8N755 202 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 FAM71DQ8N9W8 422 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 SLC2A14Q8TDB8 520 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms