RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 SERPINB12Q96P63 405 aa18.31■□□□□ 0.52
ATG9A-215ENST00000446716 ZIM3Q96PE6 472 aa18.31■□□□□ 0.52
ATG9A-215ENST00000446716 ACO2Q99798 780 aaKnown RBP18.31■□□□□ 0.52
ATG9A-215ENST00000446716 CCDC3Q9BQI4 270 aa18.31■□□□□ 0.52
ATG9A-215ENST00000446716 WHRNQ9P202 907 aa18.31■□□□□ 0.52
ATG9A-215ENST00000446716 NCALDP61601 193 aa18.31■□□□□ 0.52
ATG9A-215ENST00000446716 TERF2Q15554 542 aa18.31■□□□□ 0.52
ATG9A-215ENST00000446716 RBM43Q6ZSC3 357 aaKnown RBP18.31■□□□□ 0.52
ATG9A-215ENST00000446716 C17orf80Q9BSJ5 609 aa18.31■□□□□ 0.52
ATG9A-215ENST00000446716 TRIM4Q9C037 500 aa18.31■□□□□ 0.52
ATG9A-215ENST00000446716 RNPEPQ9H4A4 650 aa18.31■□□□□ 0.52
ATG9A-215ENST00000446716 ACOT9Q9Y305 439 aa18.31■□□□□ 0.52
ATG9A-215ENST00000446716 USP15Q9Y4E8 981 aaPredicted RBP18.31■□□□□ 0.52
ATG9A-215ENST00000446716 MRPL42Q9Y6G3 142 aaKnown RBP18.31■□□□□ 0.52
ATG9A-215ENST00000446716 ACOX1Q15067 660 aa18.31■□□□□ 0.52
ATG9A-215ENST00000446716 WDR59Q6PJI9 974 aa18.31■□□□□ 0.52
ATG9A-215ENST00000446716 TSEN34Q9BSV6 310 aaKnown RBP18.31■□□□□ 0.52
ATG9A-215ENST00000446716 SHCBP1LQ9BZQ2 653 aa18.31■□□□□ 0.52
ATG9A-215ENST00000446716 PABPC3Q9H361 631 aaKnown RBP18.31■□□□□ 0.52
ATG9A-215ENST00000446716 DCDC2Q9UHG0 476 aa18.31■□□□□ 0.52
ATG9A-215ENST00000446716 CDV3Q9UKY7 258 aaKnown RBP18.31■□□□□ 0.52
ATG9A-215ENST00000446716 GIT1Q9Y2X7 761 aa18.31■□□□□ 0.52
ATG9A-215ENST00000446716 KCNK1O00180 336 aa18.31■□□□□ 0.52
ATG9A-215ENST00000446716 DYRK3O43781 588 aa18.31■□□□□ 0.52
ATG9A-215ENST00000446716 NPR3P17342 541 aa18.31■□□□□ 0.52
ATG9A-215ENST00000446716 RPL9P32969 192 aaKnown RBP18.31■□□□□ 0.52
ATG9A-215ENST00000446716 GPC1P35052 558 aa18.31■□□□□ 0.52
ATG9A-215ENST00000446716 REXO1L1PQ8IX06 675 aa18.31■□□□□ 0.52
ATG9A-215ENST00000446716 HTR3CQ8WXA8 447 aa18.31■□□□□ 0.52
ATG9A-215ENST00000446716 TMEM159Q96B96 161 aa18.31■□□□□ 0.52
ATG9A-215ENST00000446716 SKAP2O75563 359 aaPredicted RBP18.3■□□□□ 0.52
ATG9A-215ENST00000446716 PAX3P23760 479 aa18.3■□□□□ 0.52
ATG9A-215ENST00000446716 ZNF513Q8N8E2 541 aaPredicted RBP18.3■□□□□ 0.52
ATG9A-215ENST00000446716 CMTM5Q96DZ9 223 aa18.3■□□□□ 0.52
ATG9A-215ENST00000446716 KCNK16Q96T55 309 aa18.3■□□□□ 0.52
ATG9A-215ENST00000446716 MTO1Q9Y2Z2 717 aaKnown RBP18.3■□□□□ 0.52
ATG9A-215ENST00000446716 SARSP49591 514 aaKnown RBP18.3■□□□□ 0.52
ATG9A-215ENST00000446716 SKOR1P84550 965 aa18.3■□□□□ 0.52
ATG9A-215ENST00000446716 PPP3CAQ08209 521 aa18.3■□□□□ 0.52
ATG9A-215ENST00000446716 PSMD5Q16401 504 aa18.3■□□□□ 0.52
ATG9A-215ENST00000446716 DNAL1Q4LDG9 190 aa18.3■□□□□ 0.52
ATG9A-215ENST00000446716 ARID3BQ8IVW6 561 aaPredicted RBP18.3■□□□□ 0.52
ATG9A-215ENST00000446716 C3orf20Q8ND61 904 aa18.3■□□□□ 0.52
ATG9A-215ENST00000446716 ACTRT1Q8TDG2 376 aa18.3■□□□□ 0.52
ATG9A-215ENST00000446716 RBBP8Q99708 897 aa18.3■□□□□ 0.52
ATG9A-215ENST00000446716 C2orf49Q9BVC5 232 aaPredicted RBP18.3■□□□□ 0.52
ATG9A-215ENST00000446716 IL1RL2Q9HB29 575 aa18.3■□□□□ 0.52
ATG9A-215ENST00000446716 CACNA2D2Q9NY47 1150 aa18.3■□□□□ 0.52
ATG9A-215ENST00000446716 SEPT3Q9UH03 358 aa18.3■□□□□ 0.52
ATG9A-215ENST00000446716 MYO1GB0I1T2 1018 aa18.3■□□□□ 0.52
ATG9A-215ENST00000446716 PEX19P40855 299 aa18.3■□□□□ 0.52
ATG9A-215ENST00000446716 RFX3P48380 749 aa18.3■□□□□ 0.52
ATG9A-215ENST00000446716 POLR2LP62875 67 aaKnown RBP18.3■□□□□ 0.52
ATG9A-215ENST00000446716 ST3GAL1Q11201 340 aa18.3■□□□□ 0.52
ATG9A-215ENST00000446716 CDC16Q13042 620 aa18.3■□□□□ 0.52
ATG9A-215ENST00000446716 WNT8BQ93098 351 aa18.3■□□□□ 0.52
ATG9A-215ENST00000446716 FAM162AQ96A26 154 aa18.3■□□□□ 0.52
ATG9A-215ENST00000446716 UTP6Q9NYH9 597 aaKnown RBP18.3■□□□□ 0.52
ATG9A-215ENST00000446716 TRHDEQ9UKU6 1024 aa18.3■□□□□ 0.52
ATG9A-215ENST00000446716 FARP2O94887 1054 aaPredicted RBP18.3■□□□□ 0.52
ATG9A-215ENST00000446716 GJB1P08034 283 aa18.3■□□□□ 0.52
ATG9A-215ENST00000446716 CYP2A6P11509 494 aaPredicted RBP18.3■□□□□ 0.52
ATG9A-215ENST00000446716 CDH2P19022 906 aaPredicted RBP18.3■□□□□ 0.52
ATG9A-215ENST00000446716 NOS2P35228 1153 aa18.3■□□□□ 0.52
ATG9A-215ENST00000446716 ERFP50548 548 aa18.3■□□□□ 0.52
ATG9A-215ENST00000446716 EVX2Q03828 476 aa18.3■□□□□ 0.52
ATG9A-215ENST00000446716 FBXL19Q6PCT2 694 aa18.3■□□□□ 0.52
ATG9A-215ENST00000446716 LAYNQ6UX15 382 aa18.3■□□□□ 0.52
ATG9A-215ENST00000446716 C16orf89Q6UX73 402 aa18.3■□□□□ 0.52
ATG9A-215ENST00000446716 ZNF556Q9HAH1 456 aa18.3■□□□□ 0.52
ATG9A-215ENST00000446716 MAN1C1Q9NR34 630 aa18.3■□□□□ 0.52
ATG9A-215ENST00000446716 FAM105AQ9NUU6 356 aa18.3■□□□□ 0.52
ATG9A-215ENST00000446716 RBP1P09455 135 aa18.29■□□□□ 0.52
ATG9A-215ENST00000446716 MIPP30301 263 aa18.29■□□□□ 0.52
ATG9A-215ENST00000446716 ZNF135P52742 658 aaPredicted RBP18.29■□□□□ 0.52
ATG9A-215ENST00000446716 GRIK3Q13003 919 aa18.29■□□□□ 0.52
ATG9A-215ENST00000446716 LLGL2Q6P1M3 1020 aa18.29■□□□□ 0.52
ATG9A-215ENST00000446716 SETD3Q86TU7 594 aaPredicted RBP18.29■□□□□ 0.52
ATG9A-215ENST00000446716 ICA1LQ8NDH6 482 aa18.29■□□□□ 0.52
ATG9A-215ENST00000446716 CASKIN2Q8WXE0 1202 aa18.29■□□□□ 0.52
ATG9A-215ENST00000446716 ZNF333Q96JL9 665 aa18.29■□□□□ 0.52
ATG9A-215ENST00000446716 SLC28A3Q9HAS3 691 aa18.29■□□□□ 0.52
ATG9A-215ENST00000446716 CYP4F12Q9HCS2 524 aa18.29■□□□□ 0.52
ATG9A-215ENST00000446716 MAGEB16A2A368 324 aa18.29■□□□□ 0.52
ATG9A-215ENST00000446716 CFAP73A6NFT4 308 aa18.29■□□□□ 0.52
ATG9A-215ENST00000446716 PRLRP16471 622 aa18.29■□□□□ 0.52
ATG9A-215ENST00000446716 TPH1P17752 444 aa18.29■□□□□ 0.52
ATG9A-215ENST00000446716 NDUFV1P49821 464 aa18.29■□□□□ 0.52
ATG9A-215ENST00000446716 C1QTNF7Q9BXJ2 289 aa18.29■□□□□ 0.52
ATG9A-215ENST00000446716 PCDH9Q9HC56 1237 aa18.29■□□□□ 0.52
ATG9A-215ENST00000446716 DNMT3LQ9UJW3 386 aa18.29■□□□□ 0.52
ATG9A-215ENST00000446716 C2CD2Q9Y426 696 aa18.29■□□□□ 0.52
ATG9A-215ENST00000446716 PRIM2P49643 509 aa18.29■□□□□ 0.52
ATG9A-215ENST00000446716 NCKAP1LP55160 1127 aa18.29■□□□□ 0.52
ATG9A-215ENST00000446716 MGAT5Q09328 741 aa18.29■□□□□ 0.52
ATG9A-215ENST00000446716 CNGA2Q16280 664 aa18.29■□□□□ 0.52
ATG9A-215ENST00000446716 DCLRE1AQ6PJP8 1040 aa18.29■□□□□ 0.52
ATG9A-215ENST00000446716 RGL4Q8IZJ4 473 aa18.29■□□□□ 0.52
ATG9A-215ENST00000446716 SLAIN1Q8ND83 568 aa18.29■□□□□ 0.52
ATG9A-215ENST00000446716 PLEKHA8Q96JA3 519 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms