RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 A8MUI8 341 aa19.22■□□□□ 0.67
CLK1-205ENST00000434813 HACD1B0YJ81 288 aa19.22■□□□□ 0.67
CLK1-205ENST00000434813 TRAFD1O14545 582 aaPredicted RBP19.22■□□□□ 0.67
CLK1-205ENST00000434813 KLF11O14901 512 aa19.22■□□□□ 0.67
CLK1-205ENST00000434813 DYNC1LI2O43237 492 aaPredicted RBP19.22■□□□□ 0.67
CLK1-205ENST00000434813 WFS1O76024 890 aa19.22■□□□□ 0.67
CLK1-205ENST00000434813 T-ENOLP0DO92 83 aa19.22■□□□□ 0.67
CLK1-205ENST00000434813 MATKP42679 507 aa19.22■□□□□ 0.67
CLK1-205ENST00000434813 SERPINB4P48594 390 aa19.22■□□□□ 0.67
CLK1-205ENST00000434813 ADAM17P78536 824 aa19.22■□□□□ 0.67
CLK1-205ENST00000434813 IRF5Q13568 498 aa19.22■□□□□ 0.67
CLK1-205ENST00000434813 UBXN11Q5T124 520 aa19.22■□□□□ 0.67
CLK1-205ENST00000434813 ZNF618Q5T7W0 954 aa19.22■□□□□ 0.67
CLK1-205ENST00000434813 PSTKQ8IV42 348 aaKnown RBP19.22■□□□□ 0.67
CLK1-205ENST00000434813 RFWD2Q8NHY2 731 aa19.22■□□□□ 0.67
CLK1-205ENST00000434813 TBC1D31Q96DN5 1066 aa19.22■□□□□ 0.67
CLK1-205ENST00000434813 MTBPQ96DY7 904 aa19.22■□□□□ 0.67
CLK1-205ENST00000434813 TNIP3Q96KP6 325 aa19.22■□□□□ 0.67
CLK1-205ENST00000434813 PRDM16Q9HAZ2 1276 aa19.22■□□□□ 0.67
CLK1-205ENST00000434813 ZFP69BQ9UJL9 534 aa19.22■□□□□ 0.67
CLK1-205ENST00000434813 HAO1Q9UJM8 370 aa19.22■□□□□ 0.67
CLK1-205ENST00000434813 TLL2Q9Y6L7 1015 aa19.22■□□□□ 0.67
CLK1-205ENST00000434813 FAM159BA6NKW6 160 aa19.22■□□□□ 0.67
CLK1-205ENST00000434813 DAB1O75553 588 aa19.22■□□□□ 0.67
CLK1-205ENST00000434813 DGKIO75912 1065 aa19.22■□□□□ 0.67
CLK1-205ENST00000434813 TKTP29401 623 aaKnown RBP19.22■□□□□ 0.67
CLK1-205ENST00000434813 RGS2P41220 211 aa19.22■□□□□ 0.67
CLK1-205ENST00000434813 SOX4Q06945 474 aaPredicted RBP19.22■□□□□ 0.67
CLK1-205ENST00000434813 OVGP1Q12889 678 aa19.22■□□□□ 0.67
CLK1-205ENST00000434813 HIC1Q14526 733 aa19.22■□□□□ 0.67
CLK1-205ENST00000434813 MFSD10Q14728 455 aa19.22■□□□□ 0.67
CLK1-205ENST00000434813 SLC25A52Q3SY17 297 aa19.22■□□□□ 0.67
CLK1-205ENST00000434813 TAF1BQ53T94 588 aaPredicted RBP19.22■□□□□ 0.67
CLK1-205ENST00000434813 PRAMEF19Q5SWL8 479 aa19.22■□□□□ 0.67
CLK1-205ENST00000434813 ADGRF2Q8IZF7 708 aa19.22■□□□□ 0.67
CLK1-205ENST00000434813 DNAJB3Q8WWF6 145 aa19.22■□□□□ 0.67
CLK1-205ENST00000434813 SOCS4Q8WXH5 440 aa19.22■□□□□ 0.67
CLK1-205ENST00000434813 TTC17Q96AE7 1141 aa19.22■□□□□ 0.67
CLK1-205ENST00000434813 MAGEB5Q9BZ81 275 aa19.22■□□□□ 0.67
CLK1-205ENST00000434813 IQCGQ9H095 443 aaKnown RBP19.22■□□□□ 0.67
CLK1-205ENST00000434813 ALG13Q9NP73 1137 aaKnown RBP19.22■□□□□ 0.67
CLK1-205ENST00000434813 SAR1AQ9NR31 198 aa19.22■□□□□ 0.67
CLK1-205ENST00000434813 KLK14Q9P0G3 267 aa19.22■□□□□ 0.67
CLK1-205ENST00000434813 FZD10Q9ULW2 581 aa19.22■□□□□ 0.67
CLK1-205ENST00000434813 HNRNPCL1O60812 293 aaKnown RBP19.21■□□□□ 0.67
CLK1-205ENST00000434813 CSH1P0DML2 217 aa19.21■□□□□ 0.67
CLK1-205ENST00000434813 CSH2P0DML3 217 aa19.21■□□□□ 0.67
CLK1-205ENST00000434813 GOT1P17174 413 aa19.21■□□□□ 0.67
CLK1-205ENST00000434813 ARL4AP40617 200 aa19.21■□□□□ 0.67
CLK1-205ENST00000434813 RASSF2P50749 326 aa19.21■□□□□ 0.67
CLK1-205ENST00000434813 CDHR3Q6ZTQ4 885 aa19.21■□□□□ 0.67
CLK1-205ENST00000434813 CLNKQ7Z7G1 428 aa19.21■□□□□ 0.67
CLK1-205ENST00000434813 PPP1R13LQ8WUF5 828 aa19.21■□□□□ 0.67
CLK1-205ENST00000434813 TFB1MQ8WVM0 346 aaKnown RBP19.21■□□□□ 0.67
CLK1-205ENST00000434813 HTR3CQ8WXA8 447 aa19.21■□□□□ 0.67
CLK1-205ENST00000434813 SLC7A6OSQ96CW6 309 aaPredicted RBP19.21■□□□□ 0.67
CLK1-205ENST00000434813 EBF2Q9HAK2 575 aa19.21■□□□□ 0.67
CLK1-205ENST00000434813 TMEM88BA6NKF7 163 aa19.2■□□□□ 0.66
CLK1-205ENST00000434813 TNPO2O14787 897 aaKnown RBP19.2■□□□□ 0.66
CLK1-205ENST00000434813 RFPL1O75677 317 aa19.2■□□□□ 0.66
CLK1-205ENST00000434813 KRT38O76015 456 aa19.2■□□□□ 0.66
CLK1-205ENST00000434813 VAV1P15498 845 aa19.2■□□□□ 0.66
CLK1-205ENST00000434813 CYP2B6P20813 491 aa19.2■□□□□ 0.66
CLK1-205ENST00000434813 AMPD1P23109 780 aa19.2■□□□□ 0.66
CLK1-205ENST00000434813 WARSP23381 471 aaKnown RBP19.2■□□□□ 0.66
CLK1-205ENST00000434813 CCND1P24385 295 aa19.2■□□□□ 0.66
CLK1-205ENST00000434813 CTC1Q2NKJ3 1217 aa19.2■□□□□ 0.66
CLK1-205ENST00000434813 PIGZQ86VD9 579 aa19.2■□□□□ 0.66
CLK1-205ENST00000434813 TOP6BLQ8N6T0 577 aa19.2■□□□□ 0.66
CLK1-205ENST00000434813 B3GALNT2Q8NCR0 500 aa19.2■□□□□ 0.66
CLK1-205ENST00000434813 HNRNPABQ99729 332 aaKnown RBP19.2■□□□□ 0.66
CLK1-205ENST00000434813 RNF39Q9H2S5 420 aa19.2■□□□□ 0.66
CLK1-205ENST00000434813 GOLGA2P5Q9HBQ8 144 aa19.2■□□□□ 0.66
CLK1-205ENST00000434813 MCM8Q9UJA3 840 aa19.2■□□□□ 0.66
CLK1-205ENST00000434813 DCTN4Q9UJW0 460 aa19.2■□□□□ 0.66
CLK1-205ENST00000434813 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.2■□□□□ 0.66
CLK1-205ENST00000434813 PCDHA11Q9Y5I1 949 aa19.2■□□□□ 0.66
CLK1-205ENST00000434813 SF3B1O75533 1304 aaKnown RBP eCLIP19.2■□□□□ 0.662e-6■■■■■ 37.1
CLK1-205ENST00000434813 A0A0A0MRY4 1105 aa19.2■□□□□ 0.66
CLK1-205ENST00000434813 HUS1O60921 280 aa19.2■□□□□ 0.66
CLK1-205ENST00000434813 BGNP21810 368 aa19.2■□□□□ 0.66
CLK1-205ENST00000434813 FDFT1P37268 417 aa19.2■□□□□ 0.66
CLK1-205ENST00000434813 SULT1E1P49888 294 aa19.2■□□□□ 0.66
CLK1-205ENST00000434813 ADIGQ0VDE8 80 aa19.2■□□□□ 0.66
CLK1-205ENST00000434813 OTUD1Q5VV17 481 aaPredicted RBP19.2■□□□□ 0.66
CLK1-205ENST00000434813 ZNF449Q6P9G9 518 aa19.2■□□□□ 0.66
CLK1-205ENST00000434813 BZW1Q7L1Q6 419 aaKnown RBP19.2■□□□□ 0.66
CLK1-205ENST00000434813 MTDHQ86UE4 582 aaKnown RBP19.2■□□□□ 0.66
CLK1-205ENST00000434813 TLK2Q86UE8 772 aa19.2■□□□□ 0.66
CLK1-205ENST00000434813 FAM131BQ86XD5 332 aa19.2■□□□□ 0.66
CLK1-205ENST00000434813 HACE1Q8IYU2 909 aa19.2■□□□□ 0.66
CLK1-205ENST00000434813 DEFB106AQ8N104 65 aa19.2■□□□□ 0.66
CLK1-205ENST00000434813 PYROXD2Q8N2H3 581 aa19.2■□□□□ 0.66
CLK1-205ENST00000434813 MPP5Q8N3R9 675 aa19.2■□□□□ 0.66
CLK1-205ENST00000434813 SPATA13Q96N96 652 aa19.2■□□□□ 0.66
CLK1-205ENST00000434813 ARHGEF4Q9NR80 690 aa19.2■□□□□ 0.66
CLK1-205ENST00000434813 FLRT1Q9NZU1 646 aa19.2■□□□□ 0.66
CLK1-205ENST00000434813 LNPEPQ9UIQ6 1025 aa19.2■□□□□ 0.66
CLK1-205ENST00000434813 PLLPQ9Y342 182 aa19.2■□□□□ 0.66
CLK1-205ENST00000434813 MAD1L1Q9Y6D9 718 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms