RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 RBL1P28749 1068 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 GSTT1P30711 240 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 CPA2P48052 419 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 DEUP1Q05D60 604 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 KDSRQ06136 332 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 NIPAL4Q0D2K0 466 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 SEZ6Q53EL9 994 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 FASTKD1Q53R41 847 aaKnown RBP15.72■□□□□ 0.11
C9orf3-204ENST00000424143 CATSPERGQ6ZRH7 1159 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 ZBTB33Q86T24 672 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 ZDHHC17Q8IUH5 632 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 TTLL6Q8N841 843 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 CXorf38Q8TB03 319 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 ZNF526Q8TF50 670 aaPredicted RBP15.72■□□□□ 0.11
C9orf3-204ENST00000424143 SEPT1Q8WYJ6 367 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 WNK4Q96J92 1243 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 ASB7Q9H672 318 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 RPF1Q9H9Y2 349 aaKnown RBP15.72■□□□□ 0.11
C9orf3-204ENST00000424143 HOXC10Q9NYD6 342 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 BARX2Q9UMQ3 279 aaPredicted RBP15.72■□□□□ 0.11
C9orf3-204ENST00000424143 SLC22A2O15244 555 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 ATP9BO43861 1147 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 STK10O94804 968 aaKnown RBP15.72■□□□□ 0.11
C9orf3-204ENST00000424143 UPP2O95045 317 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 C6orf222P0C671 652 aaPredicted RBP15.72■□□□□ 0.11
C9orf3-204ENST00000424143 HARSP12081 509 aaKnown RBP15.72■□□□□ 0.11
C9orf3-204ENST00000424143 SLC1A6P48664 564 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 NUMBP49757 651 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 HK2P52789 917 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 SP4Q02446 784 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 TNFAIP2Q03169 654 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 LSAMPQ13449 338 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 MED21Q13503 144 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 FAM187BQ17R55 369 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 CNPY1Q3B7I2 92 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 FAXCQ5TGI0 409 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 ATF7IP2Q5U623 682 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 POTEAQ6S8J7 498 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 SCARA5Q6ZMJ2 495 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 NT5DC4Q86YG4 428 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 NIM1KQ8IY84 436 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 PCDH19Q8TAB3 1148 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 CDKL2Q92772 493 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 QKIQ96PU8 341 aaKnown RBP eCLIP15.72■□□□□ 0.118e-7■■■■□ 23.3
C9orf3-204ENST00000424143 TUBGCP5Q96RT8 1024 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 SLC13A1Q9BZW2 595 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 C20orf27Q9GZN8 174 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 MORF4L1Q9UBU8 362 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 ADAM28Q9UKQ2 775 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 MAD1L1Q9Y6D9 718 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 CYB561D2O14569 222 aa15.71■□□□□ 0.11
C9orf3-204ENST00000424143 PENKP01210 267 aaPredicted RBP15.71■□□□□ 0.11
C9orf3-204ENST00000424143 APRTP07741 180 aa15.71■□□□□ 0.11
C9orf3-204ENST00000424143 ALDH18A1P54886 795 aaKnown RBP15.71■□□□□ 0.11
C9orf3-204ENST00000424143 POLE2P56282 527 aa15.71■□□□□ 0.11
C9orf3-204ENST00000424143 BIRC2Q13490 618 aa15.71■□□□□ 0.11
C9orf3-204ENST00000424143 CCDC14Q49A88 953 aa15.71■□□□□ 0.11
C9orf3-204ENST00000424143 FSCBQ5H9T9 825 aa15.71■□□□□ 0.11
C9orf3-204ENST00000424143 C1orf228Q6PIY5 440 aa15.71■□□□□ 0.11
C9orf3-204ENST00000424143 PLPPR4Q7Z2D5 763 aa15.71■□□□□ 0.11
C9orf3-204ENST00000424143 RASSF3Q86WH2 238 aa15.71■□□□□ 0.11
C9orf3-204ENST00000424143 PPP4R1Q8TF05 950 aa15.71■□□□□ 0.11
C9orf3-204ENST00000424143 TTC1Q99614 292 aa15.71■□□□□ 0.11
C9orf3-204ENST00000424143 SLC4A5Q9BY07 1137 aa15.71■□□□□ 0.11
C9orf3-204ENST00000424143 PDZD7Q9H5P4 517 aa15.71■□□□□ 0.11
C9orf3-204ENST00000424143 QTRT2Q9H974 415 aaKnown RBP15.71■□□□□ 0.11
C9orf3-204ENST00000424143 PCMTD2Q9NV79 361 aa15.71■□□□□ 0.11
C9orf3-204ENST00000424143 PLK2Q9NYY3 685 aa15.71■□□□□ 0.11
C9orf3-204ENST00000424143 NXF1Q9UBU9 619 aaKnown RBP15.71■□□□□ 0.11
C9orf3-204ENST00000424143 VPS28Q9UK41 221 aa15.71■□□□□ 0.11
C9orf3-204ENST00000424143 EMCNQ9ULC0 261 aa15.71■□□□□ 0.11
C9orf3-204ENST00000424143 DNAJC16Q9Y2G8 782 aa15.71■□□□□ 0.11
C9orf3-204ENST00000424143 M0QYV0 167 aa15.7■□□□□ 0.1
C9orf3-204ENST00000424143 ZNF195O14628 629 aa15.7■□□□□ 0.1
C9orf3-204ENST00000424143 DENRO43583 198 aaKnown RBP15.7■□□□□ 0.1
C9orf3-204ENST00000424143 SIN3BO75182 1162 aa15.7■□□□□ 0.1
C9orf3-204ENST00000424143 H2AFYO75367 372 aaKnown RBP15.7■□□□□ 0.1
C9orf3-204ENST00000424143 UBTFL6P0CB48 400 aaPredicted RBP15.7■□□□□ 0.1
C9orf3-204ENST00000424143 UBA1P22314 1058 aaKnown RBP15.7■□□□□ 0.1
C9orf3-204ENST00000424143 RPS12P25398 132 aaKnown RBP15.7■□□□□ 0.1
C9orf3-204ENST00000424143 ADSLP30566 484 aaPredicted RBP15.7■□□□□ 0.1
C9orf3-204ENST00000424143 MAGEA12P43365 314 aa15.7■□□□□ 0.1
C9orf3-204ENST00000424143 PTPN9P43378 593 aa15.7■□□□□ 0.1
C9orf3-204ENST00000424143 IDH3AP50213 366 aa15.7■□□□□ 0.1
C9orf3-204ENST00000424143 PDE1BQ01064 536 aa15.7■□□□□ 0.1
C9orf3-204ENST00000424143 CCNIQ14094 377 aa15.7■□□□□ 0.1
C9orf3-204ENST00000424143 DPYSL2Q16555 572 aa15.7■□□□□ 0.1
C9orf3-204ENST00000424143 TRNP1Q6NT89 227 aa15.7■□□□□ 0.1
C9orf3-204ENST00000424143 METTL7BQ6UX53 244 aa15.7■□□□□ 0.1
C9orf3-204ENST00000424143 C1orf127Q8N9H9 656 aa15.7■□□□□ 0.1
C9orf3-204ENST00000424143 PPP1R14CQ8TAE6 165 aa15.7■□□□□ 0.1
C9orf3-204ENST00000424143 DEPDC1BQ8WUY9 529 aa15.7■□□□□ 0.1
C9orf3-204ENST00000424143 ZNF778Q96MU6 729 aa15.7■□□□□ 0.1
C9orf3-204ENST00000424143 KCNK16Q96T55 309 aa15.7■□□□□ 0.1
C9orf3-204ENST00000424143 RTKNQ9BST9 563 aa15.7■□□□□ 0.1
C9orf3-204ENST00000424143 C6orf203Q9P0P8 240 aaPredicted RBP15.7■□□□□ 0.1
C9orf3-204ENST00000424143 RCOR3Q9P2K3 495 aaPredicted RBP15.7■□□□□ 0.1
C9orf3-204ENST00000424143 PRPF19Q9UMS4 504 aaKnown RBP15.7■□□□□ 0.1
C9orf3-204ENST00000424143 BTBD19C9JJ37 291 aa15.69■□□□□ 0.1
C9orf3-204ENST00000424143 RNASEH1O60930 286 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms