RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 TNFRSF4P43489 277 aa27.52■■■□□ 2
CDK9-202ENST00000421939 RING1Q06587 406 aa27.52■■■□□ 2
CDK9-202ENST00000421939 DMWDQ09019 674 aa27.52■■■□□ 2
CDK9-202ENST00000421939 PTPN20Q4JDL3 420 aa27.52■■■□□ 2
CDK9-202ENST00000421939 TAF3Q5VWG9 929 aa27.52■■■□□ 2
CDK9-202ENST00000421939 FYB2Q5VWT5 728 aa27.52■■■□□ 2
CDK9-202ENST00000421939 NUGGCQ68CJ6 796 aa27.52■■■□□ 2
CDK9-202ENST00000421939 SYT13Q7L8C5 426 aa27.52■■■□□ 2
CDK9-202ENST00000421939 NOP9Q86U38 636 aaKnown RBP27.52■■■□□ 2
CDK9-202ENST00000421939 TMEM35BQ8NCS4 154 aa27.52■■■□□ 2
CDK9-202ENST00000421939 EPS8L1Q8TE68 723 aa27.52■■■□□ 2
CDK9-202ENST00000421939 DDX1Q92499 740 aaKnown RBP27.52■■■□□ 2
CDK9-202ENST00000421939 P2RY11Q96G91 374 aa27.52■■■□□ 2
CDK9-202ENST00000421939 SPAG5Q96R06 1193 aa27.52■■■□□ 2
CDK9-202ENST00000421939 SYNCQ9H7C4 482 aa27.52■■■□□ 2
CDK9-202ENST00000421939 POLR3BQ9NW08 1133 aaPredicted RBP27.52■■■□□ 2
CDK9-202ENST00000421939 PLK2Q9NYY3 685 aa27.52■■■□□ 2
CDK9-202ENST00000421939 TBC1D3BA6NDS4 549 aa27.51■■□□□ 1.99
CDK9-202ENST00000421939 ANTXRLA6NF34 631 aa27.51■■□□□ 1.99
CDK9-202ENST00000421939 TRIM24O15164 1050 aa27.51■■□□□ 1.99
CDK9-202ENST00000421939 GFPT2O94808 682 aa27.51■■□□□ 1.99
CDK9-202ENST00000421939 CYBBP04839 570 aa27.51■■□□□ 1.99
CDK9-202ENST00000421939 CHRM1P11229 460 aaPredicted RBP27.51■■□□□ 1.99
CDK9-202ENST00000421939 CDH5P33151 784 aaPredicted RBP27.51■■□□□ 1.99
CDK9-202ENST00000421939 SOX5P35711 763 aa27.51■■□□□ 1.99
CDK9-202ENST00000421939 FNTBP49356 437 aa27.51■■□□□ 1.99
CDK9-202ENST00000421939 TBX4P57082 545 aa27.51■■□□□ 1.99
CDK9-202ENST00000421939 SNX16P57768 344 aa27.51■■□□□ 1.99
CDK9-202ENST00000421939 YWHAZP63104 245 aaKnown RBP27.51■■□□□ 1.99
CDK9-202ENST00000421939 MRPS21P82921 87 aaKnown RBP27.51■■□□□ 1.99
CDK9-202ENST00000421939 NNTQ13423 1086 aa27.51■■□□□ 1.99
CDK9-202ENST00000421939 DMC1Q14565 340 aa27.51■■□□□ 1.99
CDK9-202ENST00000421939 HEATR6Q6AI08 1181 aaKnown RBP27.51■■□□□ 1.99
CDK9-202ENST00000421939 NUDT18Q6ZVK8 323 aa27.51■■□□□ 1.99
CDK9-202ENST00000421939 TAC4Q86UU9 113 aa27.51■■□□□ 1.99
CDK9-202ENST00000421939 STOML2Q9UJZ1 356 aa27.51■■□□□ 1.99
CDK9-202ENST00000421939 WDR87Q6ZQQ6 2873 aa27.51■■□□□ 1.99
CDK9-202ENST00000421939 LMNAP02545 664 aaKnown RBP27.5■■□□□ 1.99
CDK9-202ENST00000421939 ERBB2P04626 1255 aa27.5■■□□□ 1.99
CDK9-202ENST00000421939 GLI1P08151 1106 aa27.5■■□□□ 1.99
CDK9-202ENST00000421939 HOXC13P31276 330 aa27.5■■□□□ 1.99
CDK9-202ENST00000421939 IQCB1Q15051 598 aa27.5■■□□□ 1.99
CDK9-202ENST00000421939 TAF5Q15542 800 aa27.5■■□□□ 1.99
CDK9-202ENST00000421939 C10orf76Q5T2E6 689 aa27.5■■□□□ 1.99
CDK9-202ENST00000421939 SYPL2Q5VXT5 272 aa27.5■■□□□ 1.99
CDK9-202ENST00000421939 FAM183BPQ6ZVS7 135 aa27.5■■□□□ 1.99
CDK9-202ENST00000421939 LONP2Q86WA8 852 aa27.5■■□□□ 1.99
CDK9-202ENST00000421939 UNC45BQ8IWX7 931 aa27.5■■□□□ 1.99
CDK9-202ENST00000421939 ASNSD1Q9NWL6 643 aa27.5■■□□□ 1.99
CDK9-202ENST00000421939 NOCTQ9UK39 431 aaKnown RBP27.5■■□□□ 1.99
CDK9-202ENST00000421939 TLR6Q9Y2C9 796 aa27.5■■□□□ 1.99
CDK9-202ENST00000421939 RIF1Q5UIP0 2472 aaKnown RBP27.49■■□□□ 1.99
CDK9-202ENST00000421939 HSF2BPO75031 334 aa27.49■■□□□ 1.99
CDK9-202ENST00000421939 LSM8O95777 96 aaKnown RBP27.49■■□□□ 1.99
CDK9-202ENST00000421939 STAT1P42224 750 aa27.49■■□□□ 1.99
CDK9-202ENST00000421939 KIR2DL1P43626 348 aaPredicted RBP27.49■■□□□ 1.99
CDK9-202ENST00000421939 DGKGP49619 791 aa27.49■■□□□ 1.99
CDK9-202ENST00000421939 ZNF445P59923 1031 aa27.49■■□□□ 1.99
CDK9-202ENST00000421939 HSF5Q4G112 596 aaPredicted RBP27.49■■□□□ 1.99
CDK9-202ENST00000421939 ADGRF1Q5T601 910 aa27.49■■□□□ 1.99
CDK9-202ENST00000421939 OR6B2Q6IFH4 312 aa27.49■■□□□ 1.99
CDK9-202ENST00000421939 OLFML1Q6UWY5 402 aa27.49■■□□□ 1.99
CDK9-202ENST00000421939 TOGARAM2Q6ZUX3 1019 aa27.49■■□□□ 1.99
CDK9-202ENST00000421939 CCDC33Q8N5R6 958 aa27.49■■□□□ 1.99
CDK9-202ENST00000421939 ADAM32Q8TC27 787 aa27.49■■□□□ 1.99
CDK9-202ENST00000421939 FCRL2Q96LA5 508 aaPredicted RBP27.49■■□□□ 1.99
CDK9-202ENST00000421939 HHIPQ96QV1 700 aa27.49■■□□□ 1.99
CDK9-202ENST00000421939 MMP17Q9ULZ9 603 aa27.49■■□□□ 1.99
CDK9-202ENST00000421939 MMEP08473 750 aa27.48■■□□□ 1.99
CDK9-202ENST00000421939 TIE1P35590 1138 aa27.48■■□□□ 1.99
CDK9-202ENST00000421939 EFHC1Q5JVL4 640 aa27.48■■□□□ 1.99
CDK9-202ENST00000421939 WDR5BQ86VZ2 330 aa27.48■■□□□ 1.99
CDK9-202ENST00000421939 ZNF677Q86XU0 584 aa27.48■■□□□ 1.99
CDK9-202ENST00000421939 CAMKK1Q8N5S9 505 aa27.48■■□□□ 1.99
CDK9-202ENST00000421939 ALLCQ8N6M5 410 aa27.48■■□□□ 1.99
CDK9-202ENST00000421939 IL17RCQ8NAC3 791 aa27.48■■□□□ 1.99
CDK9-202ENST00000421939 DDI1Q8WTU0 396 aa27.48■■□□□ 1.99
CDK9-202ENST00000421939 SLC20A1Q8WUM9 679 aa27.48■■□□□ 1.99
CDK9-202ENST00000421939 SLC2A13Q96QE2 648 aa27.48■■□□□ 1.99
CDK9-202ENST00000421939 EPC1Q9H2F5 836 aa27.48■■□□□ 1.99
CDK9-202ENST00000421939 FBXO10Q9UK96 956 aa27.48■■□□□ 1.99
CDK9-202ENST00000421939 FRYLO94915 3013 aa27.48■■□□□ 1.99
CDK9-202ENST00000421939 GFRA2O00451 464 aa27.47■■□□□ 1.99
CDK9-202ENST00000421939 KLF8O95600 359 aaPredicted RBP27.47■■□□□ 1.99
CDK9-202ENST00000421939 IGLV3-25P01717 112 aa27.47■■□□□ 1.99
CDK9-202ENST00000421939 CISD3P0C7P0 127 aa27.47■■□□□ 1.99
CDK9-202ENST00000421939 SLC11A2P49281 568 aa27.47■■□□□ 1.99
CDK9-202ENST00000421939 SKOR2Q2VWA4 1001 aaPredicted RBP27.47■■□□□ 1.99
CDK9-202ENST00000421939 MPPE1Q53F39 396 aa27.47■■□□□ 1.99
CDK9-202ENST00000421939 EMC10Q5UCC4 262 aa27.47■■□□□ 1.99
CDK9-202ENST00000421939 SLC26A9Q7LBE3 791 aa27.47■■□□□ 1.99
CDK9-202ENST00000421939 TXNDC5Q8NBS9 432 aaKnown RBP27.47■■□□□ 1.99
CDK9-202ENST00000421939 SLC39A13Q96H72 371 aa27.47■■□□□ 1.99
CDK9-202ENST00000421939 RTN4Q9NQC3 1192 aaKnown RBP27.47■■□□□ 1.99
CDK9-202ENST00000421939 GPR179Q6PRD1 2367 aa27.46■■□□□ 1.99
CDK9-202ENST00000421939 IRAK2O43187 625 aa27.46■■□□□ 1.99
CDK9-202ENST00000421939 GRAP2O75791 330 aa27.46■■□□□ 1.99
CDK9-202ENST00000421939 APBB3O95704 486 aa27.46■■□□□ 1.99
CDK9-202ENST00000421939 TRUB2O95900 331 aaKnown RBP27.46■■□□□ 1.99
CDK9-202ENST00000421939 PXNP49023 591 aaPredicted RBP27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms