RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 SEPT5Q99719 369 aaPredicted RBP12.67□□□□□ -0.38
CLCN4-203ENST00000421085 LRMDAQ9H2I8 198 aa12.67□□□□□ -0.38
CLCN4-203ENST00000421085 NMRK2Q9NPI5 230 aa12.67□□□□□ -0.38
CLCN4-203ENST00000421085 LIMD1Q9UGP4 676 aa12.67□□□□□ -0.38
CLCN4-203ENST00000421085 AP4E1Q9UPM8 1137 aa12.67□□□□□ -0.38
CLCN4-203ENST00000421085 ERI2A8K979 691 aaKnown RBP12.67□□□□□ -0.38
CLCN4-203ENST00000421085 TPBGLP0DKB5 382 aa12.67□□□□□ -0.38
CLCN4-203ENST00000421085 ATP6V1C1P21283 382 aa12.67□□□□□ -0.38
CLCN4-203ENST00000421085 FEN1P39748 380 aaKnown RBP12.67□□□□□ -0.38
CLCN4-203ENST00000421085 RAP1GAPP47736 663 aa12.67□□□□□ -0.38
CLCN4-203ENST00000421085 CCT3P49368 545 aaKnown RBP12.67□□□□□ -0.38
CLCN4-203ENST00000421085 TMEM63BQ5T3F8 832 aa12.67□□□□□ -0.38
CLCN4-203ENST00000421085 IER5Q5VY09 327 aa12.67□□□□□ -0.38
CLCN4-203ENST00000421085 MCOLN2Q8IZK6 566 aa12.67□□□□□ -0.38
CLCN4-203ENST00000421085 SETD9Q8NE22 299 aa12.67□□□□□ -0.38
CLCN4-203ENST00000421085 LENG1Q96BZ8 264 aaPredicted RBP12.67□□□□□ -0.38
CLCN4-203ENST00000421085 C17orf75Q9HAS0 396 aa12.67□□□□□ -0.38
CLCN4-203ENST00000421085 DMAP1Q9NPF5 467 aaPredicted RBP12.67□□□□□ -0.38
CLCN4-203ENST00000421085 PRMT7Q9NVM4 692 aaPredicted RBP12.67□□□□□ -0.38
CLCN4-203ENST00000421085 DRG1Q9Y295 367 aaKnown RBP12.67□□□□□ -0.38
CLCN4-203ENST00000421085 SETD1BQ9UPS6 1966 aaKnown RBP12.67□□□□□ -0.38
CLCN4-203ENST00000421085 TK2O00142 265 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 NR6A1Q15406 480 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 SWT1Q5T5J6 900 aaKnown RBP12.66□□□□□ -0.38
CLCN4-203ENST00000421085 CHMP1BQ7LBR1 199 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 KRT78Q8N1N4 520 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 WDR36Q8NI36 951 aaKnown RBP12.66□□□□□ -0.38
CLCN4-203ENST00000421085 OTUD5Q96G74 571 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 KRCC1Q9NPI7 259 aaPredicted RBP12.66□□□□□ -0.38
CLCN4-203ENST00000421085 RGS18Q9NS28 235 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 UBP1Q9NZI7 540 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 TADA2AO75478 443 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 TNFRSF21O75509 655 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 LCA5LO95447 670 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 VDRP11473 427 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 SLC2A4P14672 509 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 ETS2P15036 469 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 ANPEPP15144 967 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 MAGEA10P43363 369 aaPredicted RBP12.66□□□□□ -0.38
CLCN4-203ENST00000421085 SLC25A3Q00325 362 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 CDC42EP1Q00587 391 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 NDUFA5Q16718 116 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 PERM1Q5SV97 790 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 NECAB2Q7Z6G3 386 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 B3GALNT2Q8NCR0 500 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 YIPF2Q9BWQ6 316 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 CCDC154A6NI56 674 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 PCSK1P29120 753 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 DGCR6Q14129 220 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 ACOT1Q86TX2 421 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 GPRASP2Q96D09 838 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 DNAJC18Q9H819 358 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 PIH1D1Q9NWS0 290 aaKnown RBP12.66□□□□□ -0.38
CLCN4-203ENST00000421085 RAD51BO15315 384 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 NPTXRO95502 500 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 DRD4P21917 467 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 USP39Q53GS9 565 aaKnown RBP12.66□□□□□ -0.38
CLCN4-203ENST00000421085 CDC42EP5Q6NZY7 148 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 SH3BP5LQ7L8J4 393 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 ZNF512Q96ME7 567 aaPredicted RBP12.66□□□□□ -0.38
CLCN4-203ENST00000421085 OLFM1Q99784 485 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 POLG2Q9UHN1 485 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 LSM7Q9UK45 103 aaKnown RBP12.66□□□□□ -0.38
CLCN4-203ENST00000421085 FAM237BA0A1B0GVD1 139 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 MYBL2P10244 700 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 CYP2F1P24903 491 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 SKIV2L2P42285 1042 aaKnown RBP12.66□□□□□ -0.38
CLCN4-203ENST00000421085 ATP12AP54707 1039 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 MEA1Q16626 185 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 ZSWIM7Q19AV6 140 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 SAMD4BQ5PRF9 694 aaKnown RBP12.66□□□□□ -0.38
CLCN4-203ENST00000421085 FAM9CQ8IZT9 166 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 DLG3Q92796 817 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 NEO1Q92859 1461 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 NUDT12Q9BQG2 462 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 TEX13BQ9BXU2 312 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 SLC7A5P2Q9GIP4 190 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 PLGRKTQ9HBL7 147 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 PRKAG2Q9UGJ0 569 aa12.66□□□□□ -0.38
CLCN4-203ENST00000421085 IFNA14P01570 189 aa12.65□□□□□ -0.38
CLCN4-203ENST00000421085 GP5P40197 560 aa12.65□□□□□ -0.38
CLCN4-203ENST00000421085 ZNF720Q7Z2F6 126 aa12.65□□□□□ -0.38
CLCN4-203ENST00000421085 PTAR1Q7Z6K3 402 aaPredicted RBP12.65□□□□□ -0.38
CLCN4-203ENST00000421085 ZCCHC9Q8N567 271 aaKnown RBP12.65□□□□□ -0.38
CLCN4-203ENST00000421085 RXFP2Q8WXD0 754 aa12.65□□□□□ -0.38
CLCN4-203ENST00000421085 NMRK1Q9NWW6 199 aa12.65□□□□□ -0.38
CLCN4-203ENST00000421085 DNPEPQ9ULA0 475 aa12.65□□□□□ -0.38
CLCN4-203ENST00000421085 MAGEB2O15479 319 aa12.65□□□□□ -0.38
CLCN4-203ENST00000421085 PLA2G6O60733 806 aa12.65□□□□□ -0.38
CLCN4-203ENST00000421085 DDHD2O94830 711 aa12.65□□□□□ -0.38
CLCN4-203ENST00000421085 KLHL18O94889 574 aa12.65□□□□□ -0.38
CLCN4-203ENST00000421085 ARHGEF6Q15052 776 aa12.65□□□□□ -0.38
CLCN4-203ENST00000421085 KHDRBS2Q5VWX1 349 aaKnown RBP12.65□□□□□ -0.38
CLCN4-203ENST00000421085 MYO1HQ8N1T3 1032 aa12.65□□□□□ -0.38
CLCN4-203ENST00000421085 FAM45AQ8TCE6 357 aa12.65□□□□□ -0.38
CLCN4-203ENST00000421085 ACOX2Q99424 681 aa12.65□□□□□ -0.38
CLCN4-203ENST00000421085 UGT2B28Q9BY64 529 aa12.65□□□□□ -0.38
CLCN4-203ENST00000421085 QTRT2Q9H974 415 aaKnown RBP12.65□□□□□ -0.38
CLCN4-203ENST00000421085 PURAQ00577 322 aaKnown RBP12.65□□□□□ -0.38
CLCN4-203ENST00000421085 ALFQ53S48 1182 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms