RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 INTS5Q6P9B9 1019 aaKnown RBP11.51□□□□□ -0.57
PTCH1-205ENST00000418258 FBXL19Q6PCT2 694 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 TPGS1Q6ZTW0 290 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 USP49Q70CQ1 688 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 GMCL1P1Q8NEA9 526 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 RXFP2Q8WXD0 754 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 SERPINB12Q96P63 405 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 SYT15Q9BQS2 421 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 TMEM121Q9BTD3 319 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 GLIS2Q9BZE0 524 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-205ENST00000418258 TUBP50607 506 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 DNAJC3Q13217 504 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 SYN2Q92777 582 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-205ENST00000418258 IGSF6O95976 241 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 CYP2A6P11509 494 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-205ENST00000418258 NFYCQ13952 458 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 CSHL1Q14406 222 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 PKN2Q16513 984 aaKnown RBP11.51□□□□□ -0.57
PTCH1-205ENST00000418258 ATG4AQ8WYN0 398 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 MIR1-1HGQ9H1L0 117 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 ARHGEF3Q9NR81 526 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 KLHL28Q9NXS3 571 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 BARX2Q9UMQ3 279 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-205ENST00000418258 MYPNQ86TC9 1320 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 NCAM2O15394 837 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 PPP1R37O75864 691 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 CAPN1P07384 714 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 CYP24A1Q07973 514 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 RALGDSQ12967 914 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 C11orf63Q6NUN7 778 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 TRAF7Q6Q0C0 670 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 MACC1Q6ZN28 852 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 GATAD2AQ86YP4 633 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 USP38Q8NB14 1042 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 COLGALT1Q8NBJ5 622 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 FBXO36Q8NEA4 188 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 ANKS1AQ92625 1134 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 NACC2Q96BF6 587 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 PRKAG3Q9UGI9 489 aa11.51□□□□□ -0.57
PTCH1-205ENST00000418258 MRPL42Q9Y6G3 142 aaKnown RBP11.51□□□□□ -0.57
PTCH1-205ENST00000418258 ERCC6L2Q5T890 1561 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 TMEM114B3SHH9 223 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 GYPCP04921 128 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 ATP6V1B2P21281 511 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 ACAT1P24752 427 aaKnown RBP11.5□□□□□ -0.57
PTCH1-205ENST00000418258 OTUD4Q01804 1114 aaKnown RBP11.5□□□□□ -0.57
PTCH1-205ENST00000418258 SLC39A12Q504Y0 691 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 SUSD6Q92537 303 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 TPD52L3Q96J77 140 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 CELF6Q96J87 481 aaKnown RBP11.5□□□□□ -0.57
PTCH1-205ENST00000418258 ABHD16BQ9H3Z7 469 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 PARVBQ9HBI1 364 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 ATP6V1HQ9UI12 483 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 SOX13Q9UN79 622 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 TMX2Q9Y320 296 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 LRRC14BA6NHZ5 514 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 ATP5BP06576 529 aaKnown RBP11.5□□□□□ -0.57
PTCH1-205ENST00000418258 OR56A5P0C7T3 313 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 CCR4P51679 360 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 GMCL1Q96IK5 515 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 MRPL17Q9NRX2 175 aaKnown RBP11.5□□□□□ -0.57
PTCH1-205ENST00000418258 SEPT3Q9UH03 358 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 CCDC189A1A4V9 331 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 ADM5C9JUS6 153 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 O00370 1275 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 TBC1D12O60347 775 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 HSMCR30P0CW71 290 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 CCNJLQ8IV13 435 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 C3orf20Q8ND61 904 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 PHF21BQ96EK2 531 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 TRIM8Q9BZR9 551 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 CYP3A43Q9HB55 503 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 TPBGLP0DKB5 382 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 SOX10P56693 466 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 CYP4Z2PQ8N1L4 340 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 TDRD5Q8NAT2 981 aaKnown RBP11.5□□□□□ -0.57
PTCH1-205ENST00000418258 KCNA3P22001 575 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 FLT3P36888 993 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 ACVR2BQ13705 512 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 PGM5Q15124 567 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 RETSATQ6NUM9 610 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 SLC13A5Q86YT5 568 aaPredicted RBP11.5□□□□□ -0.57
PTCH1-205ENST00000418258 SLC24A3Q9HC58 644 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 ATP13A1Q9HD20 1204 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 RAD51BO15315 384 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 MICAL2O94851 1124 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 TARSP26639 723 aaKnown RBP11.5□□□□□ -0.57
PTCH1-205ENST00000418258 NDST1P52848 882 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 BCL2L1Q07817 233 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 TRAF2Q12933 501 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 TRAPPC5Q8IUR0 188 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 SLC22A9Q8IVM8 553 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 LGI2Q8N0V4 545 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 BCL2L14Q9BZR8 327 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 INTS13Q9NVM9 706 aa11.5□□□□□ -0.57
PTCH1-205ENST00000418258 CCDC130P13994 396 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 SLC2A4P14672 509 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 TMEM199Q8N511 208 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 ADAM32Q8TC27 787 aa11.49□□□□□ -0.57
PTCH1-205ENST00000418258 NAT9Q9BTE0 207 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms