RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 FBXO43Q4G163 708 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 RNASEH2BQ5TBB1 312 aaKnown RBP4.12□□□□□ -1.75
LINC01048-201ENST00000414480 MAP3K21Q5TCX8 1036 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 FYB2Q5VWT5 728 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 RNF219Q5W0B1 726 aaPredicted RBP4.12□□□□□ -1.75
LINC01048-201ENST00000414480 TPGS2Q68CL5 300 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 PPP1R2P3Q6NXS1 205 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 MIS18BP1Q6P0N0 1132 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 PDZD4Q76G19 769 aaPredicted RBP4.12□□□□□ -1.75
LINC01048-201ENST00000414480 R3HCC1LQ7Z5L2 792 aaKnown RBP4.12□□□□□ -1.75
LINC01048-201ENST00000414480 TADA2BQ86TJ2 420 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 AKAP14Q86UN6 197 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 LSMEM2Q8N112 164 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 AFAP1L2Q8N4X5 818 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 ZNF321PQ8N8H1 164 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 ZNF565Q8N9K5 539 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 DNAAF3Q8N9W5 541 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 PCYOX1LQ8NBM8 494 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 C3orf58Q8NDZ4 430 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 SHCBP1Q8NEM2 672 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 CALML6Q8TD86 181 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 RASGRP4Q8TDF6 673 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 SLC26A7Q8TE54 656 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 GRK7Q8WTQ7 553 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 SEPT1Q8WYJ6 367 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 ANKS1AQ92625 1134 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 CENPIQ92674 756 aaPredicted RBP4.12□□□□□ -1.75
LINC01048-201ENST00000414480 USP13Q92995 863 aaPredicted RBP4.12□□□□□ -1.75
LINC01048-201ENST00000414480 ZNF653Q96CK0 615 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 CHFRQ96EP1 664 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 FAM89AQ96GI7 184 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 SUCLG2Q96I99 432 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 PPP1R13BQ96KQ4 1090 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 NUDCD1Q96RS6 583 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 PLIN2Q99541 437 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 HNRNPABQ99729 332 aaKnown RBP4.12□□□□□ -1.75
LINC01048-201ENST00000414480 HAUS8Q9BT25 410 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 PACSIN1Q9BY11 444 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 PANK2Q9BZ23 570 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 C2orf40Q9H1Z8 148 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 DPH5Q9H2P9 285 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 PANK3Q9H999 370 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 TRPV4Q9HBA0 871 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 LY9Q9HBG7 655 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 ITM2CQ9NQX7 267 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 GLRX2Q9NS18 164 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 TBCCD1Q9NVR7 557 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 VPS18Q9P253 973 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 ADD3Q9UEY8 706 aaKnown RBP4.12□□□□□ -1.75
LINC01048-201ENST00000414480 TBC1D29Q9UFV1 150 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 CHORDC1Q9UHD1 332 aaPredicted RBP4.12□□□□□ -1.75
LINC01048-201ENST00000414480 STX8Q9UNK0 236 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 CFL2Q9Y281 166 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 CHTOPQ9Y3Y2 248 aaKnown RBP4.12□□□□□ -1.75
LINC01048-201ENST00000414480 PCDHGB6Q9Y5F9 930 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 SNX11Q9Y5W9 270 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 BZW2Q9Y6E2 419 aaKnown RBP4.12□□□□□ -1.75
LINC01048-201ENST00000414480 TNKSO95271 1327 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 MED23Q9ULK4 1368 aa4.12□□□□□ -1.75
LINC01048-201ENST00000414480 LTBP2Q14767 1821 aa4.11□□□□□ -1.75
LINC01048-201ENST00000414480 CACNA1BQ00975 2339 aa4.11□□□□□ -1.75
LINC01048-201ENST00000414480 TCF20Q9UGU0 1960 aaKnown RBP4.11□□□□□ -1.75
LINC01048-201ENST00000414480 DOCK3Q8IZD9 2030 aa4.11□□□□□ -1.75
LINC01048-201ENST00000414480 A0A087WUV0 522 aaPredicted RBP4.11□□□□□ -1.75
LINC01048-201ENST00000414480 A0A1W2PP55 124 aa4.11□□□□□ -1.75
LINC01048-201ENST00000414480 ARHGEF37A1IGU5 675 aa4.11□□□□□ -1.75
LINC01048-201ENST00000414480 ZSCAN5CA6NGD5 496 aaPredicted RBP4.11□□□□□ -1.75
LINC01048-201ENST00000414480 SNTNA6NMZ2 147 aa4.11□□□□□ -1.75
LINC01048-201ENST00000414480 MINDY4BA8MYZ0 360 aa4.11□□□□□ -1.75
LINC01048-201ENST00000414480 B4E171 279 aa4.11□□□□□ -1.75
LINC01048-201ENST00000414480 H0YCG3 227 aa4.11□□□□□ -1.75
LINC01048-201ENST00000414480 GOLGA8RI6L899 631 aa4.11□□□□□ -1.75
LINC01048-201ENST00000414480 SMIM22K7EJ46 135 aa4.11□□□□□ -1.75
LINC01048-201ENST00000414480 PSMA7O14818 248 aa4.11□□□□□ -1.75
LINC01048-201ENST00000414480 HAT1O14929 419 aa4.11□□□□□ -1.75
LINC01048-201ENST00000414480 RAD51BO15315 384 aa4.11□□□□□ -1.75
LINC01048-201ENST00000414480 HNRNPRO43390 633 aaKnown RBP4.11□□□□□ -1.75
LINC01048-201ENST00000414480 IDH3BO43837 385 aa4.11□□□□□ -1.75
LINC01048-201ENST00000414480 PRPSAP2O60256 369 aa4.11□□□□□ -1.75
LINC01048-201ENST00000414480 PFDN1O60925 122 aa4.11□□□□□ -1.75
LINC01048-201ENST00000414480 RNGTTO60942 597 aaKnown RBP4.11□□□□□ -1.75
LINC01048-201ENST00000414480 RNF8O76064 485 aa4.11□□□□□ -1.75
LINC01048-201ENST00000414480 ALDH1A2O94788 518 aa4.11□□□□□ -1.75
LINC01048-201ENST00000414480 LARGE1O95461 756 aa4.11□□□□□ -1.75
LINC01048-201ENST00000414480 MT-CO1P00395 513 aa4.11□□□□□ -1.75
LINC01048-201ENST00000414480 LMNAP02545 664 aaKnown RBP4.11□□□□□ -1.75
LINC01048-201ENST00000414480 ANXA1P04083 346 aa4.11□□□□□ -1.75
LINC01048-201ENST00000414480 FESP07332 822 aa4.11□□□□□ -1.75
LINC01048-201ENST00000414480 SNRNP70P08621 437 aaKnown RBP4.11□□□□□ -1.75
LINC01048-201ENST00000414480 UBTFL6P0CB48 400 aaPredicted RBP4.11□□□□□ -1.75
LINC01048-201ENST00000414480 SRGAP2BP0DMP2 458 aa4.11□□□□□ -1.75
LINC01048-201ENST00000414480 CYP2C8P10632 490 aa4.11□□□□□ -1.75
LINC01048-201ENST00000414480 PRKAR1AP10644 381 aa4.11□□□□□ -1.75
LINC01048-201ENST00000414480 PRG2P13727 222 aa4.11□□□□□ -1.75
LINC01048-201ENST00000414480 EZRP15311 586 aaKnown RBP4.11□□□□□ -1.75
LINC01048-201ENST00000414480 PRKACAP17612 351 aa4.11□□□□□ -1.75
LINC01048-201ENST00000414480 ALOX12P18054 663 aa4.11□□□□□ -1.75
LINC01048-201ENST00000414480 KLRK1P26718 216 aa4.11□□□□□ -1.75
LINC01048-201ENST00000414480 CBX5P45973 191 aa4.11□□□□□ -1.75
LINC01048-201ENST00000414480 GDI2P50395 445 aaKnown RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms