RNA–Protein interactions for RNA: ENST00000412562.1

PHBP3-201, Transcript of prohibitin pseudogene 3, humanhuman

BASIC

Gene PHBP3, Length 819 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHBP3-201ENST00000412562 TTC39CQ8N584 583 aa12.9□□□□□ -0.34
PHBP3-201ENST00000412562 OR2I1PQ8NGU4 316 aa12.9□□□□□ -0.34
PHBP3-201ENST00000412562 LMO3Q8TAP4 145 aa12.9□□□□□ -0.34
PHBP3-201ENST00000412562 DDX1Q92499 740 aaKnown RBP12.9□□□□□ -0.34
PHBP3-201ENST00000412562 PIWIL1Q96J94 861 aaKnown RBP12.9□□□□□ -0.34
PHBP3-201ENST00000412562 SPACA7Q96KW9 195 aa12.9□□□□□ -0.34
PHBP3-201ENST00000412562 MRGPRX1Q96LB2 322 aa12.9□□□□□ -0.34
PHBP3-201ENST00000412562 TIGD1Q96MW7 591 aa12.9□□□□□ -0.34
PHBP3-201ENST00000412562 LRRC4Q9HBW1 653 aa12.9□□□□□ -0.34
PHBP3-201ENST00000412562 TMEM9BQ9NQ34 198 aa12.9□□□□□ -0.34
PHBP3-201ENST00000412562 PILRBQ9UKJ0 227 aa12.9□□□□□ -0.34
PHBP3-201ENST00000412562 STON1Q9Y6Q2 735 aa12.9□□□□□ -0.34
PHBP3-201ENST00000412562 TOP3BO95985 862 aaKnown RBP12.89□□□□□ -0.35
PHBP3-201ENST00000412562 VDRP11473 427 aa12.89□□□□□ -0.35
PHBP3-201ENST00000412562 IL12RB1P42701 662 aa12.89□□□□□ -0.35
PHBP3-201ENST00000412562 NOVA1P51513 510 aaKnown RBP12.89□□□□□ -0.35
PHBP3-201ENST00000412562 BCAT1P54687 386 aa12.89□□□□□ -0.35
PHBP3-201ENST00000412562 STX17P56962 302 aa12.89□□□□□ -0.35
PHBP3-201ENST00000412562 NUCB2P80303 420 aa12.89□□□□□ -0.35
PHBP3-201ENST00000412562 BST2Q10589 180 aaKnown RBP12.89□□□□□ -0.35
PHBP3-201ENST00000412562 BECN1Q14457 450 aa12.89□□□□□ -0.35
PHBP3-201ENST00000412562 TRIP4Q15650 581 aaPredicted RBP12.89□□□□□ -0.35
PHBP3-201ENST00000412562 SH3PXD2AQ5TCZ1 1133 aa12.89□□□□□ -0.35
PHBP3-201ENST00000412562 BSPRYQ5W0U4 402 aa12.89□□□□□ -0.35
PHBP3-201ENST00000412562 SDE2Q6IQ49 451 aa12.89□□□□□ -0.35
PHBP3-201ENST00000412562 PMF1Q6P1K2 205 aa12.89□□□□□ -0.35
PHBP3-201ENST00000412562 KIAA1324Q6UXG2 1013 aaKnown RBP12.89□□□□□ -0.35
PHBP3-201ENST00000412562 RRAGAQ7L523 313 aa12.89□□□□□ -0.35
PHBP3-201ENST00000412562 SYT12Q8IV01 421 aa12.89□□□□□ -0.35
PHBP3-201ENST00000412562 ARHGAP18Q8N392 663 aa12.89□□□□□ -0.35
PHBP3-201ENST00000412562 RBBP8NLQ8NC74 664 aaPredicted RBP12.89□□□□□ -0.35
PHBP3-201ENST00000412562 CLEC4CQ8WTT0 213 aa12.89□□□□□ -0.35
PHBP3-201ENST00000412562 NELFBQ8WX92 580 aa12.89□□□□□ -0.35
PHBP3-201ENST00000412562 DHTKD1Q96HY7 919 aaPredicted RBP12.89□□□□□ -0.35
PHBP3-201ENST00000412562 CDK5RAP1Q96SZ6 601 aaKnown RBP12.89□□□□□ -0.35
PHBP3-201ENST00000412562 DNAI2Q9GZS0 605 aa12.89□□□□□ -0.35
PHBP3-201ENST00000412562 STRIP2Q9ULQ0 834 aa12.89□□□□□ -0.35
PHBP3-201ENST00000412562 SLC27A6Q9Y2P4 619 aa12.89□□□□□ -0.35
PHBP3-201ENST00000412562 PCDHB4Q9Y5E5 795 aa12.89□□□□□ -0.35
PHBP3-201ENST00000412562 TNRC6BQ9UPQ9 1833 aaKnown RBP12.88□□□□□ -0.35
PHBP3-201ENST00000412562 GOLGA6L7A0A1B0GV03 622 aa12.88□□□□□ -0.35
PHBP3-201ENST00000412562 PSMA7O14818 248 aa12.88□□□□□ -0.35
PHBP3-201ENST00000412562 AP5Z1O43299 807 aa12.88□□□□□ -0.35
PHBP3-201ENST00000412562 CFIP05156 583 aa12.88□□□□□ -0.35
PHBP3-201ENST00000412562 ENGP17813 658 aa12.88□□□□□ -0.35
PHBP3-201ENST00000412562 SPINK2P20155 84 aa12.88□□□□□ -0.35
PHBP3-201ENST00000412562 BRD2P25440 801 aaKnown RBP12.88□□□□□ -0.35
PHBP3-201ENST00000412562 MAOBP27338 520 aa12.88□□□□□ -0.35
PHBP3-201ENST00000412562 CHKAP35790 457 aa12.88□□□□□ -0.35
PHBP3-201ENST00000412562 SGSHP51688 502 aa12.88□□□□□ -0.35
PHBP3-201ENST00000412562 SLC8A3P57103 927 aa12.88□□□□□ -0.35
PHBP3-201ENST00000412562 ZNF33AQ06730 810 aa12.88□□□□□ -0.35
PHBP3-201ENST00000412562 BYSLQ13895 437 aaKnown RBP12.88□□□□□ -0.35
PHBP3-201ENST00000412562 FUT11Q495W5 492 aa12.88□□□□□ -0.35
PHBP3-201ENST00000412562 CCDC40Q4G0X9 1142 aa12.88□□□□□ -0.35
PHBP3-201ENST00000412562 LCLAT1Q6UWP7 414 aa12.88□□□□□ -0.35
PHBP3-201ENST00000412562 CACUL1Q86Y37 369 aa12.88□□□□□ -0.35
PHBP3-201ENST00000412562 FAM217AQ8IXS0 508 aa12.88□□□□□ -0.35
PHBP3-201ENST00000412562 TRIML1Q8N9V2 468 aa12.88□□□□□ -0.35
PHBP3-201ENST00000412562 DEFB124Q8NES8 71 aa12.88□□□□□ -0.35
PHBP3-201ENST00000412562 DDI1Q8WTU0 396 aa12.88□□□□□ -0.35
PHBP3-201ENST00000412562 CEP63Q96MT8 703 aa12.88□□□□□ -0.35
PHBP3-201ENST00000412562 IPO9Q96P70 1041 aaKnown RBP12.88□□□□□ -0.35
PHBP3-201ENST00000412562 DCLK3Q9C098 648 aa12.88□□□□□ -0.35
PHBP3-201ENST00000412562 MKRN2Q9H000 416 aaKnown RBP12.88□□□□□ -0.35
PHBP3-201ENST00000412562 FAM124BQ9H5Z6 455 aaPredicted RBP12.88□□□□□ -0.35
PHBP3-201ENST00000412562 THAP10Q9P2Z0 257 aaPredicted RBP12.88□□□□□ -0.35
PHBP3-201ENST00000412562 HESX1Q9UBX0 185 aa12.88□□□□□ -0.35
PHBP3-201ENST00000412562 EVLQ9UI08 416 aaPredicted RBP12.88□□□□□ -0.35
PHBP3-201ENST00000412562 CTNND2Q9UQB3 1225 aa12.88□□□□□ -0.35
PHBP3-201ENST00000412562 ZNF510Q9Y2H8 683 aa12.88□□□□□ -0.35
PHBP3-201ENST00000412562 ZFYVE26Q68DK2 2539 aa12.87□□□□□ -0.35
PHBP3-201ENST00000412562 KCNJ18B7U540 433 aa12.87□□□□□ -0.35
PHBP3-201ENST00000412562 GFRA2O00451 464 aa12.87□□□□□ -0.35
PHBP3-201ENST00000412562 TBXAS1P24557 533 aaPredicted RBP12.87□□□□□ -0.35
PHBP3-201ENST00000412562 PRKCHP24723 683 aa12.87□□□□□ -0.35
PHBP3-201ENST00000412562 HOXD9P28356 352 aaPredicted RBP12.87□□□□□ -0.35
PHBP3-201ENST00000412562 DAOAP59103 153 aa12.87□□□□□ -0.35
PHBP3-201ENST00000412562 MORC3Q14149 939 aa12.87□□□□□ -0.35
PHBP3-201ENST00000412562 ZNF234Q14588 700 aa12.87□□□□□ -0.35
PHBP3-201ENST00000412562 DAB2IPQ5VWQ8 1189 aa12.87□□□□□ -0.35
PHBP3-201ENST00000412562 PEAR1Q5VY43 1037 aaPredicted RBP12.87□□□□□ -0.35
PHBP3-201ENST00000412562 SLC23A3Q6PIS1 610 aa12.87□□□□□ -0.35
PHBP3-201ENST00000412562 SIX6OS1Q8N1H7 587 aa12.87□□□□□ -0.35
PHBP3-201ENST00000412562 PPM1KQ8N3J5 372 aa12.87□□□□□ -0.35
PHBP3-201ENST00000412562 CPXM2Q8N436 756 aa12.87□□□□□ -0.35
PHBP3-201ENST00000412562 ZNF366Q8N895 744 aa12.87□□□□□ -0.35
PHBP3-201ENST00000412562 SLC35F5Q8WV83 523 aa12.87□□□□□ -0.35
PHBP3-201ENST00000412562 KCTD13Q8WZ19 329 aa12.87□□□□□ -0.35
PHBP3-201ENST00000412562 PLD4Q96BZ4 506 aa12.87□□□□□ -0.35
PHBP3-201ENST00000412562 MYEOVQ96EZ4 313 aa12.87□□□□□ -0.35
PHBP3-201ENST00000412562 HSPA12BQ96MM6 686 aa12.87□□□□□ -0.35
PHBP3-201ENST00000412562 KREMEN1Q96MU8 473 aa12.87□□□□□ -0.35
PHBP3-201ENST00000412562 NT5C1BQ96P26 610 aa12.87□□□□□ -0.35
PHBP3-201ENST00000412562 GTPBP2Q9BX10 602 aaKnown RBP12.87□□□□□ -0.35
PHBP3-201ENST00000412562 CIPCQ9C0C6 399 aa12.87□□□□□ -0.35
PHBP3-201ENST00000412562 METTL14Q9HCE5 456 aaKnown RBP12.87□□□□□ -0.35
PHBP3-201ENST00000412562 ELOVL2Q9NXB9 296 aa12.87□□□□□ -0.35
PHBP3-201ENST00000412562 ANGPTL2Q9UKU9 493 aa12.87□□□□□ -0.35
PHBP3-201ENST00000412562 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms