RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 IRAK2O43187 625 aa23.3■■□□□ 1.32
PTCD3-203ENST00000409783 HNRNPH3P31942 346 aaKnown RBP23.3■■□□□ 1.32
PTCD3-203ENST00000409783 NOS2P35228 1153 aa23.3■■□□□ 1.32
PTCD3-203ENST00000409783 OPRD1P41143 372 aa23.3■■□□□ 1.32
PTCD3-203ENST00000409783 UBXN2BQ14CS0 331 aa23.3■■□□□ 1.32
PTCD3-203ENST00000409783 PON2Q15165 354 aa23.3■■□□□ 1.32
PTCD3-203ENST00000409783 ACAD10Q6JQN1 1059 aa23.3■■□□□ 1.32
PTCD3-203ENST00000409783 SUGP1Q8IWZ8 645 aaKnown RBP23.3■■□□□ 1.32
PTCD3-203ENST00000409783 NT5C3BQ969T7 300 aa23.3■■□□□ 1.32
PTCD3-203ENST00000409783 CLDN23Q96B33 292 aa23.3■■□□□ 1.32
PTCD3-203ENST00000409783 FBRSL1Q9HCM7 1045 aaKnown RBP23.3■■□□□ 1.32
PTCD3-203ENST00000409783 ADAM22Q9P0K1 906 aa23.3■■□□□ 1.32
PTCD3-203ENST00000409783 MARK1Q9P0L2 795 aa23.3■■□□□ 1.32
PTCD3-203ENST00000409783 NDRG2Q9UN36 371 aaKnown RBP23.3■■□□□ 1.32
PTCD3-203ENST00000409783 TLR6Q9Y2C9 796 aa23.3■■□□□ 1.32
PTCD3-203ENST00000409783 MRPS17Q9Y2R5 130 aaKnown RBP23.3■■□□□ 1.32
PTCD3-203ENST00000409783 SIT1Q9Y3P8 196 aa23.3■■□□□ 1.32
PTCD3-203ENST00000409783 TCRBV5S1A1TA0A578 114 aa23.29■■□□□ 1.32
PTCD3-203ENST00000409783 GFRA2O00451 464 aa23.29■■□□□ 1.32
PTCD3-203ENST00000409783 HOXC11O43248 304 aaPredicted RBP23.29■■□□□ 1.32
PTCD3-203ENST00000409783 ADH1CP00326 375 aa23.29■■□□□ 1.32
PTCD3-203ENST00000409783 ADH5P11766 374 aa23.29■■□□□ 1.32
PTCD3-203ENST00000409783 FLT3P36888 993 aa23.29■■□□□ 1.32
PTCD3-203ENST00000409783 MATKP42679 507 aa23.29■■□□□ 1.32
PTCD3-203ENST00000409783 C1QBPQ07021 282 aaKnown RBP23.29■■□□□ 1.32
PTCD3-203ENST00000409783 TBX2Q13207 712 aaPredicted RBP23.29■■□□□ 1.32
PTCD3-203ENST00000409783 TRIM14Q14142 442 aa23.29■■□□□ 1.32
PTCD3-203ENST00000409783 TMEM196Q5HYL7 178 aa23.29■■□□□ 1.32
PTCD3-203ENST00000409783 ARCQ7LC44 396 aa23.29■■□□□ 1.32
PTCD3-203ENST00000409783 C12orf40Q86WS4 652 aa23.29■■□□□ 1.32
PTCD3-203ENST00000409783 NPY6RQ99463 290 aa23.29■■□□□ 1.32
PTCD3-203ENST00000409783 CALCOCO1Q9P1Z2 691 aa23.29■■□□□ 1.32
PTCD3-203ENST00000409783 LATS1O95835 1130 aa23.28■■□□□ 1.32
PTCD3-203ENST00000409783 SERPING1P05155 500 aa23.28■■□□□ 1.32
PTCD3-203ENST00000409783 CALB1P05937 261 aa23.28■■□□□ 1.32
PTCD3-203ENST00000409783 DCNP07585 359 aaKnown RBP23.28■■□□□ 1.32
PTCD3-203ENST00000409783 PLEKP08567 350 aaPredicted RBP23.28■■□□□ 1.32
PTCD3-203ENST00000409783 CHRNB1P11230 501 aa23.28■■□□□ 1.32
PTCD3-203ENST00000409783 TFE3P19532 575 aaPredicted RBP23.28■■□□□ 1.32
PTCD3-203ENST00000409783 HARS2P49590 506 aaKnown RBP23.28■■□□□ 1.32
PTCD3-203ENST00000409783 GALK1P51570 392 aa23.28■■□□□ 1.32
PTCD3-203ENST00000409783 RNASE9P60153 205 aaKnown RBP23.28■■□□□ 1.32
PTCD3-203ENST00000409783 CDK17Q00537 523 aa23.28■■□□□ 1.32
PTCD3-203ENST00000409783 AMPD2Q01433 879 aa23.28■■□□□ 1.32
PTCD3-203ENST00000409783 FSTL4Q6MZW2 842 aa23.28■■□□□ 1.32
PTCD3-203ENST00000409783 WDR59Q6PJI9 974 aa23.28■■□□□ 1.32
PTCD3-203ENST00000409783 PHLDB2Q86SQ0 1253 aa23.28■■□□□ 1.32
PTCD3-203ENST00000409783 ETFBKMTQ8IXQ9 262 aa23.28■■□□□ 1.32
PTCD3-203ENST00000409783 MCOLN2Q8IZK6 566 aa23.28■■□□□ 1.32
PTCD3-203ENST00000409783 CPXM2Q8N436 756 aa23.28■■□□□ 1.32
PTCD3-203ENST00000409783 AZIN2Q96A70 460 aa23.28■■□□□ 1.32
PTCD3-203ENST00000409783 DNAJC7Q99615 494 aa23.28■■□□□ 1.32
PTCD3-203ENST00000409783 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.28■■□□□ 1.32
PTCD3-203ENST00000409783 WDR35Q9P2L0 1181 aa23.28■■□□□ 1.32
PTCD3-203ENST00000409783 BZW2Q9Y6E2 419 aaKnown RBP23.28■■□□□ 1.32
PTCD3-203ENST00000409783 GZMAP12544 262 aa23.27■■□□□ 1.32
PTCD3-203ENST00000409783 ZNF75DP51815 510 aa23.27■■□□□ 1.32
PTCD3-203ENST00000409783 GAD2Q05329 585 aa23.27■■□□□ 1.32
PTCD3-203ENST00000409783 CCINQ13939 588 aa23.27■■□□□ 1.32
PTCD3-203ENST00000409783 NUGGCQ68CJ6 796 aa23.27■■□□□ 1.32
PTCD3-203ENST00000409783 BNIPLQ7Z465 357 aa23.27■■□□□ 1.32
PTCD3-203ENST00000409783 UNC45BQ8IWX7 931 aa23.27■■□□□ 1.32
PTCD3-203ENST00000409783 EZH1Q92800 747 aaPredicted RBP23.27■■□□□ 1.32
PTCD3-203ENST00000409783 P2RY13Q9BPV8 354 aa23.27■■□□□ 1.32
PTCD3-203ENST00000409783 ANP32EQ9BTT0 268 aa23.27■■□□□ 1.32
PTCD3-203ENST00000409783 METTL5Q9NRN9 209 aaKnown RBP23.27■■□□□ 1.32
PTCD3-203ENST00000409783 ARHGAP20Q9P2F6 1191 aa23.27■■□□□ 1.32
PTCD3-203ENST00000409783 GJB6O95452 261 aa23.26■■□□□ 1.31
PTCD3-203ENST00000409783 CHKAP35790 457 aa23.26■■□□□ 1.31
PTCD3-203ENST00000409783 SLC6A11P48066 632 aa23.26■■□□□ 1.31
PTCD3-203ENST00000409783 MESP2Q0VG99 397 aa23.26■■□□□ 1.31
PTCD3-203ENST00000409783 TDRD12Q587J7 1177 aaKnown RBP23.26■■□□□ 1.31
PTCD3-203ENST00000409783 ZC3H12AQ5D1E8 599 aaKnown RBP23.26■■□□□ 1.31
PTCD3-203ENST00000409783 NADSYN1Q6IA69 706 aa23.26■■□□□ 1.31
PTCD3-203ENST00000409783 TPGS1Q6ZTW0 290 aa23.26■■□□□ 1.31
PTCD3-203ENST00000409783 DNAAF5Q86Y56 855 aa23.26■■□□□ 1.31
PTCD3-203ENST00000409783 DRC7Q8IY82 874 aa23.26■■□□□ 1.31
PTCD3-203ENST00000409783 PHTF2Q8N3S3 785 aa23.26■■□□□ 1.31
PTCD3-203ENST00000409783 C3orf20Q8ND61 904 aa23.26■■□□□ 1.31
PTCD3-203ENST00000409783 JOSD2Q8TAC2 188 aa23.26■■□□□ 1.31
PTCD3-203ENST00000409783 CD101Q93033 1021 aa23.26■■□□□ 1.31
PTCD3-203ENST00000409783 PGAP3Q96FM1 320 aaPredicted RBP23.26■■□□□ 1.31
PTCD3-203ENST00000409783 DDIT4Q9NX09 232 aa23.26■■□□□ 1.31
PTCD3-203ENST00000409783 RRN3Q9NYV6 651 aa23.26■■□□□ 1.31
PTCD3-203ENST00000409783 ACSL4O60488 711 aa23.25■■□□□ 1.31
PTCD3-203ENST00000409783 PENKP01210 267 aaPredicted RBP23.25■■□□□ 1.31
PTCD3-203ENST00000409783 EIF2DP41214 584 aaKnown RBP23.25■■□□□ 1.31
PTCD3-203ENST00000409783 RPS9P46781 194 aaKnown RBP23.25■■□□□ 1.31
PTCD3-203ENST00000409783 ANO4Q32M45 955 aa23.25■■□□□ 1.31
PTCD3-203ENST00000409783 FAM133BQ5BKY9 247 aaKnown RBP23.25■■□□□ 1.31
PTCD3-203ENST00000409783 ADGRF1Q5T601 910 aa23.25■■□□□ 1.31
PTCD3-203ENST00000409783 FYB2Q5VWT5 728 aa23.25■■□□□ 1.31
PTCD3-203ENST00000409783 TMC6Q7Z403 805 aa23.25■■□□□ 1.31
PTCD3-203ENST00000409783 EMC1Q8N766 993 aa23.25■■□□□ 1.31
PTCD3-203ENST00000409783 OR8K1Q8NGG5 319 aa23.25■■□□□ 1.31
PTCD3-203ENST00000409783 MRFAP1L1Q96HT8 127 aa23.25■■□□□ 1.31
PTCD3-203ENST00000409783 VCPIP1Q96JH7 1222 aa23.25■■□□□ 1.31
PTCD3-203ENST00000409783 TBCBQ99426 244 aa23.25■■□□□ 1.31
PTCD3-203ENST00000409783 BBS2Q9BXC9 721 aa23.25■■□□□ 1.31
PTCD3-203ENST00000409783 FAM204AQ9H8W3 233 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms