RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 KANSL3Q9P2N6 904 aa12.36□□□□□ -0.43
SMCR8-201ENST00000406438 CHORDC1Q9UHD1 332 aaPredicted RBP12.36□□□□□ -0.43
SMCR8-201ENST00000406438 SIK3Q9Y2K2 1263 aa12.36□□□□□ -0.43
SMCR8-201ENST00000406438 CNTNAP5Q8WYK1 1306 aa12.36□□□□□ -0.43
SMCR8-201ENST00000406438 CCDC154A6NI56 674 aa12.36□□□□□ -0.43
SMCR8-201ENST00000406438 RAD51BO15315 384 aa12.36□□□□□ -0.43
SMCR8-201ENST00000406438 KLHL18O94889 574 aa12.36□□□□□ -0.43
SMCR8-201ENST00000406438 HNMTP50135 292 aa12.36□□□□□ -0.43
SMCR8-201ENST00000406438 TRIM28Q13263 835 aaKnown RBP12.36□□□□□ -0.43
SMCR8-201ENST00000406438 TLK2Q86UE8 772 aa12.36□□□□□ -0.43
SMCR8-201ENST00000406438 CBWD2Q8IUF1 395 aa12.36□□□□□ -0.43
SMCR8-201ENST00000406438 MAGEC3Q8TD91 643 aa12.36□□□□□ -0.43
SMCR8-201ENST00000406438 USP7Q93009 1102 aa12.36□□□□□ -0.43
SMCR8-201ENST00000406438 ACTR8Q9H981 624 aa12.36□□□□□ -0.43
SMCR8-201ENST00000406438 CBX4O00257 560 aa12.36□□□□□ -0.43
SMCR8-201ENST00000406438 LSM8O95777 96 aaKnown RBP12.36□□□□□ -0.43
SMCR8-201ENST00000406438 ALDH2P05091 517 aa12.36□□□□□ -0.43
SMCR8-201ENST00000406438 RAD23AP54725 363 aa12.36□□□□□ -0.43
SMCR8-201ENST00000406438 ILF2Q12905 390 aaKnown RBP12.36□□□□□ -0.43
SMCR8-201ENST00000406438 EPC2Q52LR7 807 aa12.36□□□□□ -0.43
SMCR8-201ENST00000406438 DGKKQ5KSL6 1271 aa12.36□□□□□ -0.43
SMCR8-201ENST00000406438 FAM172AQ8WUF8 416 aa12.36□□□□□ -0.43
SMCR8-201ENST00000406438 GPAMQ9HCL2 828 aa12.36□□□□□ -0.43
SMCR8-201ENST00000406438 ATP6V1HQ9UI12 483 aa12.36□□□□□ -0.43
SMCR8-201ENST00000406438 ENDOD1O94919 500 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 CYP11B1P15538 503 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 PLEKHA7Q6IQ23 1121 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 TRMT11Q7Z4G4 463 aaKnown RBP12.35□□□□□ -0.43
SMCR8-201ENST00000406438 IZUMO1Q8IYV9 350 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 FLCNQ8NFG4 579 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 ZFYVE1Q9HBF4 777 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 TDRKHQ9Y2W6 561 aaKnown RBP12.35□□□□□ -0.43
SMCR8-201ENST00000406438 COQ6Q9Y2Z9 468 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 PRR36Q9H6K5 1346 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 E7ENQ6 273 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 RHOAP61586 193 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 RASA2Q15283 850 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 FAXCQ5TGI0 409 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 HLA-DQA1Q5Y7H0 255 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 CLEC4MQ9H2X3 399 aaPredicted RBP12.35□□□□□ -0.43
SMCR8-201ENST00000406438 JMJD4Q9H9V9 463 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 NDUFA13Q9P0J0 144 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 LRRC14BA6NHZ5 514 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 CDC73Q6P1J9 531 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 FBXO36Q8NEA4 188 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 FBXL21Q9UKT6 434 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 PTPN3P26045 913 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 CCR1P32246 355 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 POLR2LP62875 67 aaKnown RBP12.35□□□□□ -0.43
SMCR8-201ENST00000406438 CNGA2Q16280 664 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 TMEM26Q6ZUK4 368 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 TMEM132CQ8N3T6 1108 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 UTP15Q8TED0 518 aaKnown RBP12.35□□□□□ -0.43
SMCR8-201ENST00000406438 MYH7BA7E2Y1 1941 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 SLC26A2P50443 739 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 VAC14Q08AM6 782 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 KCNT1Q5JUK3 1230 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 ERGIC2Q96RQ1 377 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 APOL4Q9BPW4 351 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 GRIK3Q13003 919 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 MPP3Q13368 585 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 CBWD3Q5JTY5 395 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 CBWD5Q5RIA9 395 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 ERMARDQ5T6L9 678 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 C11orf63Q6NUN7 778 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 UXS1Q8NBZ7 420 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 TMEM159Q96B96 161 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 DNAJC1Q96KC8 554 aaKnown RBP12.35□□□□□ -0.43
SMCR8-201ENST00000406438 BBS4Q96RK4 519 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 ZSWIM1Q9BR11 485 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 TMEM79Q9BSE2 394 aa12.35□□□□□ -0.43
SMCR8-201ENST00000406438 WARSP23381 471 aaKnown RBP12.34□□□□□ -0.43
SMCR8-201ENST00000406438 GMPSP49915 693 aaPredicted RBP12.34□□□□□ -0.43
SMCR8-201ENST00000406438 ACOX1Q15067 660 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 PMF1Q6P1K2 205 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 KLHL25Q9H0H3 589 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 HAO1Q9UJM8 370 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 ITGA11Q9UKX5 1188 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 ERI2A8K979 691 aaKnown RBP12.34□□□□□ -0.43
SMCR8-201ENST00000406438 BAIAP3O94812 1187 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 MAP3K6O95382 1288 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 PKN1Q16512 942 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 CLEC10AQ8IUN9 316 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 CEP44Q9C0F1 390 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 FBXO10Q9UK96 956 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 GTF3C4Q9UKN8 822 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 TRIM43BA6NCK2 446 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 DNALI1O14645 258 aaPredicted RBP12.34□□□□□ -0.43
SMCR8-201ENST00000406438 TKTP29401 623 aaKnown RBP12.34□□□□□ -0.43
SMCR8-201ENST00000406438 OR1E1P30953 314 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 GCLCP48506 637 aaPredicted RBP12.34□□□□□ -0.43
SMCR8-201ENST00000406438 KLHL17Q6TDP4 642 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 ATG9AQ7Z3C6 839 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 MDM1Q8TC05 714 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 DCLRE1BQ9H816 532 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 AP4E1Q9UPM8 1137 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 TAF13Q15543 124 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 ALG11Q2TAA5 492 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 GATAD2AQ86YP4 633 aa12.34□□□□□ -0.43
SMCR8-201ENST00000406438 NACC2Q96BF6 587 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms