RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 OTOAQ7RTW8 1153 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 MTDHQ86UE4 582 aaKnown RBP11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 RASSF3Q86WH2 238 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 RNF139Q8WU17 664 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 LRRC39Q96DD0 335 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 RSRC1Q96IZ7 334 aaKnown RBP11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 SYT15Q9BQS2 421 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 DDIT4Q9NX09 232 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 FGFR1P11362 822 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 MLH1P40692 756 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 LILRA4P59901 499 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 TAZQ16635 292 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 STRADAQ7RTN6 431 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 SENP8Q96LD8 212 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 GAD1Q99259 594 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 TSPYL2Q9H2G4 693 aaPredicted RBP11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 RRAGCQ9HB90 399 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 SSU72Q9NP77 194 aaKnown RBP11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 ZFATQ9P243 1243 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 TRIM33Q9UPN9 1127 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 ZNFX1Q9P2E3 1918 aaKnown RBP11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 WDR27A2RRH5 827 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 SDR42E2A6NKP2 422 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 E7ESA3 106 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 MRPS5P82675 430 aaKnown RBP11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 BNIP1Q12981 228 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 PRPSAP1Q14558 356 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 DPYSL2Q16555 572 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 SLC25A52Q3SY17 297 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 OLFML2BQ68BL8 750 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 SLC9A4Q6AI14 798 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 CRYBG2Q8N1P7 616 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 TOP6BLQ8N6T0 577 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 CXorf38Q8TB03 319 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 TUBB6Q9BUF5 446 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 POPDC2Q9HBU9 364 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 CASTOR2A6NHX0 329 aa11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 UNCXA6NJT0 531 aa11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 RNF103O00237 685 aa11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 ESRRAP11474 423 aaPredicted RBP11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 SERPINB4P48594 390 aa11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 SLC18A1P54219 525 aa11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 CCL14Q16627 93 aa11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 PAN2Q504Q3 1202 aaKnown RBP11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 TAF2Q6P1X5 1199 aa11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 PPP4R1Q8TF05 950 aa11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 E2F7Q96AV8 911 aa11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 MTBPQ96DY7 904 aa11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 ULBP1Q9BZM6 244 aa11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 USP29Q9HBJ7 922 aa11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 HEY2Q9UBP5 337 aa11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 HACD1B0YJ81 288 aa11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 RPSAP08865 295 aaKnown RBP11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 LHX1P48742 406 aa11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 RCN2Q14257 317 aa11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 RASA2Q15283 850 aa11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 CHI3L2Q15782 390 aa11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 CFAP157Q5JU67 520 aa11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 C6orf163Q5TEZ5 329 aa11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 BANPQ8N9N5 519 aa11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 TMEM237Q96Q45 408 aa11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 BFARQ9NZS9 450 aa11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 NR2E3Q9Y5X4 410 aa11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 TEX264Q9Y6I9 313 aa11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 A0A0A0MRY4 1105 aa11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 PIRO00625 290 aa11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 SPTLC1O15269 473 aa11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 SAT1P21673 171 aa11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 MAP2K2P36507 400 aa11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 BRCA1P38398 1863 aaKnown RBP11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 CRADDP78560 199 aa11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 UNC5AQ6ZN44 842 aa11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 WNT8BQ93098 351 aa11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 ATXN7L3BQ96GX2 97 aa11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 SERAC1Q96JX3 654 aa11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 SPATA13Q96N96 652 aa11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 EPAS1Q99814 870 aa11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 EBNA1BP2Q99848 306 aaKnown RBP11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 SIK2Q9H0K1 926 aa11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 MARCOQ9UEW3 520 aaPredicted RBP11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 WDR90Q96KV7 1748 aa11.93□□□□□ -0.5
PDXDC1-202ENST00000396410 TYROBPO43914 113 aa11.92□□□□□ -0.5
PDXDC1-202ENST00000396410 DAB1O75553 588 aa11.92□□□□□ -0.5
PDXDC1-202ENST00000396410 FBXO21O94952 628 aa11.92□□□□□ -0.5
PDXDC1-202ENST00000396410 UNC5CO95185 931 aa11.92□□□□□ -0.5
PDXDC1-202ENST00000396410 METTL18O95568 372 aa11.92□□□□□ -0.5
PDXDC1-202ENST00000396410 GSTA2P09210 222 aa11.92□□□□□ -0.5
PDXDC1-202ENST00000396410 SRGAP2BP0DMP2 458 aa11.92□□□□□ -0.5
PDXDC1-202ENST00000396410 PCSK1P29120 753 aa11.92□□□□□ -0.5
PDXDC1-202ENST00000396410 ZRSR2Q15696 482 aaKnown RBP11.92□□□□□ -0.5
PDXDC1-202ENST00000396410 PRPF39Q86UA1 669 aaKnown RBP11.92□□□□□ -0.5
PDXDC1-202ENST00000396410 AGGF1Q8N302 714 aaeCLIP11.92□□□□□ -0.57e-7■□□□□ 9.1
PDXDC1-202ENST00000396410 PPARGC1AQ9UBK2 798 aaKnown RBP11.92□□□□□ -0.5
PDXDC1-202ENST00000396410 MTO1Q9Y2Z2 717 aaKnown RBP11.92□□□□□ -0.5
PDXDC1-202ENST00000396410 CDY2AQ9Y6F7 541 aa11.92□□□□□ -0.5
PDXDC1-202ENST00000396410 LCTP09848 1927 aa11.92□□□□□ -0.5
PDXDC1-202ENST00000396410 KCNK1O00180 336 aa11.92□□□□□ -0.5
PDXDC1-202ENST00000396410 ATP9BO43861 1147 aa11.92□□□□□ -0.5
PDXDC1-202ENST00000396410 NDUFV1P49821 464 aa11.92□□□□□ -0.5
PDXDC1-202ENST00000396410 LONP2Q86WA8 852 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms