RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 GOT1P17174 413 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 LIG3P49916 1009 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 TKTL1P51854 596 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 CRADDP78560 199 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 TAP1Q03518 808 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 INCA1Q0VD86 236 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 AUHQ13825 339 aaKnown RBP11.2□□□□□ -0.62
NEDD9-201ENST00000379433 QPCTQ16769 361 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 MSS51Q4VC12 460 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 CASC4Q6P4E1 433 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 PPP1R21Q6ZMI0 780 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 KDM7AQ6ZMT4 941 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 ALLCQ8N6M5 410 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 RAET1EQ8TD07 263 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 PYROXD1Q8WU10 500 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 DEPDC1BQ8WUY9 529 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 MCRS1Q96EZ8 462 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 TMEM209Q96SK2 561 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 ABCG4Q9H172 646 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 ADAM7Q9H2U9 754 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 WHRNQ9P202 907 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 GTF2IRD1Q9UHL9 959 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 XPO7Q9UIA9 1087 aaKnown RBP11.2□□□□□ -0.62
NEDD9-201ENST00000379433 SPO11Q9Y5K1 396 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 CA12O43570 354 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 NCAM1P13591 858 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 CDH5P33151 784 aaPredicted RBP11.2□□□□□ -0.62
NEDD9-201ENST00000379433 ATN1P54259 1190 aaPredicted RBP11.2□□□□□ -0.62
NEDD9-201ENST00000379433 HDAC4P56524 1084 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 ROR1Q01973 937 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 DPYSL3Q14195 570 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 FNBP1LQ5T0N5 605 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 KIAA0319Q5VV43 1072 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 LRIG3Q6UXM1 1119 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 SCN4BQ8IWT1 228 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 PALM2Q8IXS6 379 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 FUKQ8N0W3 1084 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 C12orf50Q8NA57 414 aaPredicted RBP11.2□□□□□ -0.62
NEDD9-201ENST00000379433 SLC35F5Q8WV83 523 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 GIMAP1Q8WWP7 306 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 TACO1Q9BSH4 297 aaKnown RBP11.2□□□□□ -0.62
NEDD9-201ENST00000379433 BEGAINQ9BUH8 593 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 C2orf49Q9BVC5 232 aaPredicted RBP11.2□□□□□ -0.62
NEDD9-201ENST00000379433 PLEKHA5Q9HAU0 1116 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 HOMER3Q9NSC5 361 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 CNTN3Q9P232 1028 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 NUP205Q92621 2012 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 SCN4AP35499 1836 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.19□□□□□ -0.62
NEDD9-201ENST00000379433 RASA4BC9J798 803 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 RASA4O43374 803 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 XPOTO43592 962 aaKnown RBP11.19□□□□□ -0.62
NEDD9-201ENST00000379433 DESP17661 470 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 PTPN1P18031 435 aaKnown RBP11.19□□□□□ -0.62
NEDD9-201ENST00000379433 MAN1A1P33908 653 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 DRG2P55039 364 aaKnown RBP11.19□□□□□ -0.62
NEDD9-201ENST00000379433 RNASELQ05823 741 aaKnown RBP11.19□□□□□ -0.62
NEDD9-201ENST00000379433 BST2Q10589 180 aaKnown RBP11.19□□□□□ -0.62
NEDD9-201ENST00000379433 HIF1AQ16665 826 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 KYAT1Q16773 422 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 SV2CQ496J9 727 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 FAM47EQ6ZV65 393 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 NLRP14Q86W24 1093 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 RAVER1Q8IY67 606 aaKnown RBP11.19□□□□□ -0.62
NEDD9-201ENST00000379433 ARFGAP2Q8N6H7 521 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 MIPOL1Q8TD10 442 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 LGMNQ99538 433 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 CHST12Q9NRB3 414 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 PSD3Q9NYI0 1048 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 AP4E1Q9UPM8 1137 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 LRRC37A2A6NM11 1700 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 TMEM120BA0PK00 339 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 C3orf70A6NLC5 250 aaPredicted RBP11.19□□□□□ -0.62
NEDD9-201ENST00000379433 CCDC159P0C7I6 412 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 SRGAP2BP0DMP2 458 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 BRAFP15056 766 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 BCAT1P54687 386 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 AP1B1Q10567 949 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 ZBTB6Q15916 424 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 C3orf62Q6ZUJ4 267 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 GPRIN1Q7Z2K8 1008 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 ULBP1Q9BZM6 244 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 TMEM30AQ9NV96 361 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 IL1RAPL1Q9NZN1 696 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 NT5C1B-RDH14C9J2C7 533 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 PIRO00625 290 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 SGTAO43765 313 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 MOCS2O96007 188 aaPredicted RBP11.19□□□□□ -0.62
NEDD9-201ENST00000379433 CYP2F1P24903 491 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 KLRC2P26717 231 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 EIF3BP55884 814 aaKnown RBP11.19□□□□□ -0.62
NEDD9-201ENST00000379433 SNX16P57768 344 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 ADAM17P78536 824 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 OLIG2Q13516 323 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 TAF2Q6P1X5 1199 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 AGMOQ6ZNB7 445 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 KDELC2Q7Z4H8 507 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 MAP7D3Q8IWC1 876 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 CD302Q8IX05 232 aa11.19□□□□□ -0.62
NEDD9-201ENST00000379433 ANKRD52Q8NB46 1076 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms