RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 TMEM8AQ9HCN3 771 aa12.94□□□□□ -0.34
VRK3-202ENST00000377011 ASAH2Q9NR71 780 aa12.94□□□□□ -0.34
VRK3-202ENST00000377011 CTTNBP2NLQ9P2B4 639 aa12.94□□□□□ -0.34
VRK3-202ENST00000377011 UVRAGQ9P2Y5 699 aa12.94□□□□□ -0.34
VRK3-202ENST00000377011 CDH9Q9ULB4 789 aa12.94□□□□□ -0.34
VRK3-202ENST00000377011 MAFFQ9ULX9 164 aa12.94□□□□□ -0.34
VRK3-202ENST00000377011 COQ4Q9Y3A0 265 aa12.94□□□□□ -0.34
VRK3-202ENST00000377011 KRBA1A5PL33 1030 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 GMNCA6NCL1 334 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 C5orf60A6NFR6 353 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 BEST1O76090 585 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 FTLP02792 175 aaPredicted RBP12.93□□□□□ -0.34
VRK3-202ENST00000377011 CYP1A2P05177 515 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 NDST1P52848 882 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 AP3M2P53677 418 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 NOP14P78316 857 aaKnown RBP12.93□□□□□ -0.34
VRK3-202ENST00000377011 SIGLEC14Q08ET2 396 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 BYSLQ13895 437 aaKnown RBP12.93□□□□□ -0.34
VRK3-202ENST00000377011 GRM2Q14416 872 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 SGSM1Q2NKQ1 1148 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 SCN4BQ8IWT1 228 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 CNPY4Q8N129 248 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 C12orf50Q8NA57 414 aaPredicted RBP12.93□□□□□ -0.34
VRK3-202ENST00000377011 EPS8L1Q8TE68 723 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 SHC3Q92529 594 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 ALG3Q92685 438 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 KCNK16Q96T55 309 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 C1QTNF1Q9BXJ1 281 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 BCO2Q9BYV7 579 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 PABPC3Q9H361 631 aaKnown RBP12.93□□□□□ -0.34
VRK3-202ENST00000377011 SNX25Q9H3E2 840 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 SEPT11Q9NVA2 429 aaKnown RBP12.93□□□□□ -0.34
VRK3-202ENST00000377011 TAS2R14Q9NYV8 317 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 MTRF1LQ9UGC7 380 aaKnown RBP12.93□□□□□ -0.34
VRK3-202ENST00000377011 NOCTQ9UK39 431 aaKnown RBP12.93□□□□□ -0.34
VRK3-202ENST00000377011 MAGED2Q9UNF1 606 aaPredicted RBP12.93□□□□□ -0.34
VRK3-202ENST00000377011 DUSP12Q9UNI6 340 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 KMT2EQ8IZD2 1858 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 SLC38A8A6NNN8 435 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 VGLL3A8MV65 326 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 PRAMEF12O95522 483 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 F11P03951 625 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 CCDC130P13994 396 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 NPR3P17342 541 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 CD58P19256 250 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 PCSK1P29120 753 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 PTGIRP43119 386 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 FNTAP49354 379 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 TUFMP49411 452 aaKnown RBP12.93□□□□□ -0.34
VRK3-202ENST00000377011 LIG3P49916 1009 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 KRT71Q3SY84 523 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 CYP4A22Q5TCH4 519 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 TTC19Q6DKK2 380 aaPredicted RBP12.93□□□□□ -0.34
VRK3-202ENST00000377011 ENOSF1Q7L5Y1 443 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 TAX1BP1Q86VP1 789 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 SPATA2LQ8IUW3 424 aaPredicted RBP12.93□□□□□ -0.34
VRK3-202ENST00000377011 ARHGEF19Q8IW93 802 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 B3GALNT2Q8NCR0 500 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 ZSCAN18Q8TBC5 510 aaPredicted RBP12.93□□□□□ -0.34
VRK3-202ENST00000377011 SLCO2A1Q92959 643 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 KAT5Q92993 513 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 CD101Q93033 1021 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 ASB16Q96NS5 453 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 SLC22A12Q96S37 553 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 ELOVL4Q9GZR5 314 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 STMN4Q9H169 189 aaPredicted RBP12.93□□□□□ -0.34
VRK3-202ENST00000377011 ATXN3LQ9H3M9 355 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 HSFX1Q9UBD0 423 aa12.93□□□□□ -0.34
VRK3-202ENST00000377011 COL4A2P08572 1712 aa12.92□□□□□ -0.34
VRK3-202ENST00000377011 SHISA7A6NL88 538 aa12.92□□□□□ -0.34
VRK3-202ENST00000377011 PRR33A8MZF0 331 aa12.92□□□□□ -0.34
VRK3-202ENST00000377011 F8VP50 259 aa12.92□□□□□ -0.34
VRK3-202ENST00000377011 PI15O43692 258 aa12.92□□□□□ -0.34
VRK3-202ENST00000377011 CALCAP01258 141 aa12.92□□□□□ -0.34
VRK3-202ENST00000377011 HPDP32754 393 aaPredicted RBP12.92□□□□□ -0.34
VRK3-202ENST00000377011 FLT3P36888 993 aa12.92□□□□□ -0.34
VRK3-202ENST00000377011 PGFP49763 221 aa12.92□□□□□ -0.34
VRK3-202ENST00000377011 PEX5P50542 639 aa12.92□□□□□ -0.34
VRK3-202ENST00000377011 PMS2P54278 862 aa12.92□□□□□ -0.34
VRK3-202ENST00000377011 IFFO1Q0D2I5 559 aa12.92□□□□□ -0.34
VRK3-202ENST00000377011 SLMAPQ14BN4 828 aa12.92□□□□□ -0.34
VRK3-202ENST00000377011 NFE2Q16621 373 aaPredicted RBP12.92□□□□□ -0.34
VRK3-202ENST00000377011 KRT39Q6A163 491 aa12.92□□□□□ -0.34
VRK3-202ENST00000377011 C6orf89Q6UWU4 347 aa12.92□□□□□ -0.34
VRK3-202ENST00000377011 VITQ6UXI7 678 aa12.92□□□□□ -0.34
VRK3-202ENST00000377011 FUKQ8N0W3 1084 aa12.92□□□□□ -0.34
VRK3-202ENST00000377011 ZMIZ2Q8NF64 920 aa12.92□□□□□ -0.34
VRK3-202ENST00000377011 SPATA18Q8TC71 538 aa12.92□□□□□ -0.34
VRK3-202ENST00000377011 C2orf15Q8WU43 125 aaKnown RBP12.92□□□□□ -0.34
VRK3-202ENST00000377011 SLC20A1Q8WUM9 679 aa12.92□□□□□ -0.34
VRK3-202ENST00000377011 TRIM51Q9BSJ1 452 aa12.92□□□□□ -0.34
VRK3-202ENST00000377011 SLC46A2Q9BY10 475 aa12.92□□□□□ -0.34
VRK3-202ENST00000377011 DPH5Q9H2P9 285 aa12.92□□□□□ -0.34
VRK3-202ENST00000377011 ACTR5Q9H9F9 607 aaPredicted RBP12.92□□□□□ -0.34
VRK3-202ENST00000377011 FAM49BQ9NUQ9 324 aa12.92□□□□□ -0.34
VRK3-202ENST00000377011 RAB20Q9NX57 234 aa12.92□□□□□ -0.34
VRK3-202ENST00000377011 IGSF9Q9P2J2 1179 aa12.92□□□□□ -0.34
VRK3-202ENST00000377011 CA14Q9ULX7 337 aa12.92□□□□□ -0.34
VRK3-202ENST00000377011 CCL26Q9Y258 94 aa12.92□□□□□ -0.34
VRK3-202ENST00000377011 F5P12259 2224 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms