RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 PPP1R36Q96LQ0 422 aa12.12□□□□□ -0.47
CDC42BPA-202ENST00000366764 ZNF556Q9HAH1 456 aa12.12□□□□□ -0.47
CDC42BPA-202ENST00000366764 STAG3L1P0CL83 205 aa12.12□□□□□ -0.47
CDC42BPA-202ENST00000366764 SPATA31C1P0DKV0 1188 aa12.12□□□□□ -0.47
CDC42BPA-202ENST00000366764 RHBDL3P58872 404 aa12.12□□□□□ -0.47
CDC42BPA-202ENST00000366764 LAMTOR4Q0VGL1 99 aa12.12□□□□□ -0.47
CDC42BPA-202ENST00000366764 FRG1Q14331 258 aaKnown RBP12.12□□□□□ -0.47
CDC42BPA-202ENST00000366764 SLC12A4Q9UP95 1085 aa12.12□□□□□ -0.47
CDC42BPA-202ENST00000366764 FAM32AQ9Y421 112 aaKnown RBP12.12□□□□□ -0.47
CDC42BPA-202ENST00000366764 E9PBE3 544 aa12.12□□□□□ -0.47
CDC42BPA-202ENST00000366764 KLHL41O60662 606 aa12.12□□□□□ -0.47
CDC42BPA-202ENST00000366764 RUNX1T1Q06455 604 aa12.12□□□□□ -0.47
CDC42BPA-202ENST00000366764 TSTA3Q13630 321 aaPredicted RBP12.12□□□□□ -0.47
CDC42BPA-202ENST00000366764 B3GNT6Q6ZMB0 384 aa12.12□□□□□ -0.47
CDC42BPA-202ENST00000366764 FNIP1Q8TF40 1166 aa12.12□□□□□ -0.47
CDC42BPA-202ENST00000366764 PPP2R3BQ9Y5P8 575 aa12.12□□□□□ -0.47
CDC42BPA-202ENST00000366764 TPBGLP0DKB5 382 aa12.12□□□□□ -0.47
CDC42BPA-202ENST00000366764 GYS1P13807 737 aa12.12□□□□□ -0.47
CDC42BPA-202ENST00000366764 GLIS3Q8NEA6 775 aa12.12□□□□□ -0.47
CDC42BPA-202ENST00000366764 ZNF670Q9BS34 389 aa12.12□□□□□ -0.47
CDC42BPA-202ENST00000366764 IL22Q9GZX6 179 aa12.12□□□□□ -0.47
CDC42BPA-202ENST00000366764 RAD23AP54725 363 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 ARSHQ5FYA8 562 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 STKLD1Q8NE28 680 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 RDH11Q8TC12 318 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 DDIT4Q9NX09 232 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 RPL5P46777 297 aaKnown RBP12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 TMEM161BQ8NDZ6 487 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 ODC1P11926 461 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 ASTE1Q2TB18 679 aaPredicted RBP12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 MICALL2Q8IY33 904 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 NKD2Q969F2 451 aaPredicted RBP12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 MROH8Q9H579 483 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 TBC1D13Q9NVG8 400 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 A0A0A0MRY4 1105 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 ZBTB24O43167 697 aaPredicted RBP12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 KATNA1O75449 491 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 RAG1P15918 1043 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 MARCKSL1P49006 195 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 POU4F1Q01851 419 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 CYP1B1Q16678 543 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 LRRC8DQ7L1W4 858 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 B4GALNT2Q8NHY0 566 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 SPATA13Q96N96 652 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 PRPF19Q9UMS4 504 aaKnown RBP12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 PDGFRBP09619 1106 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 MAPK1P28482 360 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 MIPP30301 263 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 CLK1P49759 484 aaKnown RBP12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 ACBD5Q5T8D3 534 aaPredicted RBP12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 SMYD5Q6GMV2 418 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 TAS2R42Q7RTR8 314 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 FAM210AQ96ND0 272 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 NINQ8N4C6 2090 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 NFIBO00712 420 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 SEC24DO94855 1032 aaPredicted RBP12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 FASP25445 335 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 NR1H2P55055 460 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 MTM1Q13496 603 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 ZACNQ401N2 412 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 COG4Q9H9E3 785 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 VAV3Q9UKW4 847 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 SATB2Q9UPW6 733 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 ELMSAN1Q6PJG2 1045 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 LZTR1Q8N653 840 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 ENOPH1Q9UHY7 261 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 H3BNX3 289 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 MYL3P08590 195 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 RNF219Q5W0B1 726 aaPredicted RBP12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 OR6J1Q8NGC5 347 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 PDCD6IPQ8WUM4 868 aaKnown RBP12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 FAM162AQ96A26 154 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 PABPC5Q96DU9 382 aaKnown RBP12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 SQORQ9Y6N5 450 aa12.11□□□□□ -0.47
CDC42BPA-202ENST00000366764 VPS26AO75436 327 aa12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 ITGA9Q13797 1035 aa12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 ECSITQ9BQ95 431 aa12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 ETAA1Q9NY74 926 aa12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 NFASCO94856 1347 aa12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 DGKIO75912 1065 aa12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 GJB6O95452 261 aa12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 GSTT1P30711 240 aa12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 ERFP50548 548 aa12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 CLNKQ7Z7G1 428 aa12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 UBA3Q8TBC4 463 aa12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 CERKQ8TCT0 537 aa12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 SYTL2Q9HCH5 934 aa12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 MYH14Q7Z406 1995 aaKnown RBP12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 FAAP100Q0VG06 881 aa12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 BNIP1Q12981 228 aa12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 TUBGCP6Q96RT7 1819 aa12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 DDTLA6NHG4 134 aaPredicted RBP12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 MMRN1Q13201 1228 aa12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 LPCAT2Q7L5N7 544 aa12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 TRPC4APQ8TEL6 797 aa12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 ACSF2Q96CM8 615 aaPredicted RBP12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 TIMMDC1Q9NPL8 285 aa12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 C2CD2Q9Y426 696 aa12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 RNF103O00237 685 aa12.1□□□□□ -0.47
CDC42BPA-202ENST00000366764 TCN1P20061 433 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms