RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 ENTPD5O75356 428 aa12.69□□□□□ -0.38
COLCA1-201ENST00000355430 AP1G2O75843 785 aa12.69□□□□□ -0.38
COLCA1-201ENST00000355430 ABHD2P08910 425 aa12.69□□□□□ -0.38
COLCA1-201ENST00000355430 UBA1P22314 1058 aaKnown RBP12.69□□□□□ -0.38
COLCA1-201ENST00000355430 AMHR2Q16671 573 aa12.69□□□□□ -0.38
COLCA1-201ENST00000355430 DCAF6Q58WW2 860 aa12.69□□□□□ -0.38
COLCA1-201ENST00000355430 TMPRSS6Q8IU80 811 aa12.69□□□□□ -0.38
COLCA1-201ENST00000355430 DDIASQ8IXT1 998 aa12.69□□□□□ -0.38
COLCA1-201ENST00000355430 TMEM161BQ8NDZ6 487 aa12.69□□□□□ -0.38
COLCA1-201ENST00000355430 UXTQ9UBK9 157 aaPredicted RBP12.69□□□□□ -0.38
COLCA1-201ENST00000355430 DCDC2Q9UHG0 476 aa12.69□□□□□ -0.38
COLCA1-201ENST00000355430 SMIM10L2AP0DMW4 78 aa12.69□□□□□ -0.38
COLCA1-201ENST00000355430 SMIM10L2BP0DMW5 78 aa12.69□□□□□ -0.38
COLCA1-201ENST00000355430 CKBP12277 381 aa12.69□□□□□ -0.38
COLCA1-201ENST00000355430 PDK4Q16654 411 aa12.69□□□□□ -0.38
COLCA1-201ENST00000355430 SLC45A4Q5BKX6 768 aa12.69□□□□□ -0.38
COLCA1-201ENST00000355430 FAM171A1Q5VUB5 890 aa12.69□□□□□ -0.38
COLCA1-201ENST00000355430 CCDC149Q6ZUS6 474 aa12.69□□□□□ -0.38
COLCA1-201ENST00000355430 FRA10AC1Q70Z53 315 aa12.69□□□□□ -0.38
COLCA1-201ENST00000355430 PPHLN1Q8NEY8 458 aaKnown RBP12.69□□□□□ -0.38
COLCA1-201ENST00000355430 PBXIP1Q96AQ6 731 aa12.69□□□□□ -0.38
COLCA1-201ENST00000355430 SH3KBP1Q96B97 665 aa12.69□□□□□ -0.38
COLCA1-201ENST00000355430 NRBF2Q96F24 287 aa12.69□□□□□ -0.38
COLCA1-201ENST00000355430 EML4Q9HC35 981 aaKnown RBP12.69□□□□□ -0.38
COLCA1-201ENST00000355430 KIAA1257Q9ULG3 409 aa12.69□□□□□ -0.38
COLCA1-201ENST00000355430 PCDHB5Q9Y5E4 795 aa12.69□□□□□ -0.38
COLCA1-201ENST00000355430 H0Y626 953 aa12.68□□□□□ -0.38
COLCA1-201ENST00000355430 VDRP11473 427 aa12.68□□□□□ -0.38
COLCA1-201ENST00000355430 PRAMEP78395 509 aa12.68□□□□□ -0.38
COLCA1-201ENST00000355430 SATB1Q01826 763 aa12.68□□□□□ -0.38
COLCA1-201ENST00000355430 OR6P1Q8NGX9 317 aa12.68□□□□□ -0.38
COLCA1-201ENST00000355430 CNPY3Q9BT09 278 aa12.68□□□□□ -0.38
COLCA1-201ENST00000355430 R3HDM2Q9Y2K5 976 aaKnown RBP12.68□□□□□ -0.38
COLCA1-201ENST00000355430 LRCH1Q9Y2L9 728 aa12.68□□□□□ -0.38
COLCA1-201ENST00000355430 ADCY6O43306 1168 aa12.68□□□□□ -0.38
COLCA1-201ENST00000355430 SYNCRIPO60506 623 aaKnown RBP12.68□□□□□ -0.38
COLCA1-201ENST00000355430 PSMG1O95456 288 aa12.68□□□□□ -0.38
COLCA1-201ENST00000355430 FDFT1P37268 417 aa12.68□□□□□ -0.38
COLCA1-201ENST00000355430 PTDSS1P48651 473 aaKnown RBP12.68□□□□□ -0.38
COLCA1-201ENST00000355430 PCBP1Q15365 356 aaKnown RBP eCLIP12.68□□□□□ -0.38
COLCA1-201ENST00000355430 TRMT5Q32P41 509 aaKnown RBP12.68□□□□□ -0.38
COLCA1-201ENST00000355430 C16orf87Q6PH81 154 aa12.68□□□□□ -0.38
COLCA1-201ENST00000355430 CTU1Q7Z7A3 348 aaKnown RBP12.68□□□□□ -0.38
COLCA1-201ENST00000355430 IFNL1Q8IU54 200 aa12.68□□□□□ -0.38
COLCA1-201ENST00000355430 IL31RAQ8NI17 732 aa12.68□□□□□ -0.38
COLCA1-201ENST00000355430 SLC7A14Q8TBB6 771 aa12.68□□□□□ -0.38
COLCA1-201ENST00000355430 BCAS3Q9H6U6 928 aa12.68□□□□□ -0.38
COLCA1-201ENST00000355430 RPS6KL1Q9Y6S9 549 aa12.68□□□□□ -0.38
COLCA1-201ENST00000355430 SCN11AQ9UI33 1791 aa12.68□□□□□ -0.38
COLCA1-201ENST00000355430 PTPN11Q06124 597 aaPredicted RBP12.68□□□□□ -0.38
COLCA1-201ENST00000355430 PDPK2PQ6A1A2 396 aa12.68□□□□□ -0.38
COLCA1-201ENST00000355430 ZCCHC23Q6ZST2 131 aa12.68□□□□□ -0.38
COLCA1-201ENST00000355430 ACOT1Q86TX2 421 aa12.68□□□□□ -0.38
COLCA1-201ENST00000355430 A0A1W2PPM1 405 aa12.68□□□□□ -0.38
COLCA1-201ENST00000355430 C3orf70A6NLC5 250 aaPredicted RBP12.68□□□□□ -0.38
COLCA1-201ENST00000355430 STARD3Q14849 445 aa12.68□□□□□ -0.38
COLCA1-201ENST00000355430 MFSD5Q6N075 450 aa12.68□□□□□ -0.38
COLCA1-201ENST00000355430 TNS4Q8IZW8 715 aa12.68□□□□□ -0.38
COLCA1-201ENST00000355430 ATPAF2Q8N5M1 289 aa12.68□□□□□ -0.38
COLCA1-201ENST00000355430 HASPINQ8TF76 798 aa12.68□□□□□ -0.38
COLCA1-201ENST00000355430 PTPRN2Q92932 1015 aa12.68□□□□□ -0.38
COLCA1-201ENST00000355430 TMEM176AQ96HP8 235 aa12.68□□□□□ -0.38
COLCA1-201ENST00000355430 KLHL4Q9C0H6 718 aa12.68□□□□□ -0.38
COLCA1-201ENST00000355430 E9PBE3 544 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 KLHL41O60662 606 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 FGBP02675 491 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 INHAP05111 366 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 ATICP31939 592 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 DPYSL3Q14195 570 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 UGCGQ16739 394 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 OVOS1Q6IE37 1185 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 ZNF467Q7Z7K2 595 aaPredicted RBP12.67□□□□□ -0.38
COLCA1-201ENST00000355430 HERC6Q8IVU3 1022 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 ING2Q9H160 280 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 GRHL1Q9NZI5 618 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.67□□□□□ -0.38
COLCA1-201ENST00000355430 SDR42E2A6NKP2 422 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 E5RI56 91 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 AKAP10O43572 662 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 CXCL8P10145 99 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 ATP4AP20648 1035 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 ZNF177Q13360 481 aaPredicted RBP12.67□□□□□ -0.38
COLCA1-201ENST00000355430 NFIL3Q16649 462 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 RMDN2Q96LZ7 410 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 SLC25A13Q9UJS0 675 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 PCDHA2Q9Y5H9 948 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 FAM237BA0A1B0GVD1 139 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 PLA2G6O60733 806 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 ACADMP11310 421 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 NCAM1P13591 858 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 PDCD2Q16342 344 aaPredicted RBP12.67□□□□□ -0.38
COLCA1-201ENST00000355430 TAS2R42Q7RTR8 314 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 VSIG10LQ86VR7 867 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 POU5F2Q8N7G0 328 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 SNTG2Q9NY99 539 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 RALBP11234 206 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 ITGA7Q13683 1181 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 NPNTQ6UXI9 565 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 TRABD2AQ86V40 505 aa12.67□□□□□ -0.38
COLCA1-201ENST00000355430 PPP1R2P1Q96PQ5 205 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms