RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 ZNF362Q5T0B9 420 aaPredicted RBP1.8□□□□□ -2.12
BRCA1-202ENST00000354071 RBM20Q5T481 1227 aaKnown RBP1.8□□□□□ -2.12
BRCA1-202ENST00000354071 TTI2Q6NXR4 508 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 USP30Q70CQ3 517 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 FRMD1Q8N878 549 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 GOLGA6L2Q8N9W4 650 aaPredicted RBP1.8□□□□□ -2.12
BRCA1-202ENST00000354071 SUPT20HQ8NEM7 779 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 ZMIZ2Q8NF64 920 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 GPR150Q8NGU9 434 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 SUN3Q8TAQ9 357 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 ZNF764Q96H86 408 aaPredicted RBP1.8□□□□□ -2.12
BRCA1-202ENST00000354071 ZNF512Q96ME7 567 aaPredicted RBP1.8□□□□□ -2.12
BRCA1-202ENST00000354071 GNRHR2Q96P88 292 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 SCPEP1Q9HB40 452 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 PDE7BQ9NP56 450 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 ZFP64Q9NPA5 681 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 ZSCAN32Q9NX65 697 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 SIRT5Q9NXA8 310 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 POGKQ9P215 609 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 SMG5Q9UPR3 1016 aaKnown RBP1.8□□□□□ -2.12
BRCA1-202ENST00000354071 POLR1AO95602 1720 aaPredicted RBP1.8□□□□□ -2.12
BRCA1-202ENST00000354071 KDM5BQ9UGL1 1544 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 A0A1W2PRX2 142 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 URADA6NGE7 173 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 MASP2O00187 686 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 CD3EAPO15446 510 aaKnown RBP1.8□□□□□ -2.12
BRCA1-202ENST00000354071 DIAPH2O60879 1101 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 SEC31AO94979 1220 aaKnown RBP1.8□□□□□ -2.12
BRCA1-202ENST00000354071 GLP2RO95838 553 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 POMCP01189 267 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 CLEC3BP05452 202 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 SPATA31D3P0C874 917 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 CHN1P15882 459 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 ITPKBP27987 946 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 CIITAP33076 1130 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 AFF3P51826 1226 aaKnown RBP1.8□□□□□ -2.12
BRCA1-202ENST00000354071 HNRNPMP52272 730 aaKnown RBP eCLIP1.8□□□□□ -2.12
BRCA1-202ENST00000354071 NPEPPSP55786 919 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 C17orf67Q0P5P2 114 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 EFR3AQ14156 821 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 SLC9B1Q4ZJI4 515 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 FAM133BQ5BKY9 247 aaKnown RBP1.8□□□□□ -2.12
BRCA1-202ENST00000354071 C1QL3Q5VWW1 255 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 MFSD6Q6ZSS7 791 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 SPATA31D4Q6ZUB0 917 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 MGARPQ8TDB4 240 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 CPT1BQ92523 772 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 KCNN1Q92952 543 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 ZKSCAN4Q969J2 545 aaPredicted RBP1.8□□□□□ -2.12
BRCA1-202ENST00000354071 MBD6Q96DN6 1003 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 YTHDC1Q96MU7 727 aaKnown RBP1.8□□□□□ -2.12
BRCA1-202ENST00000354071 ST6GALNAC4Q9H4F1 302 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 POLR1BQ9H9Y6 1135 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 ZBTB26Q9HCK0 441 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 USP40Q9NVE5 1235 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 MAP3K2Q9Y2U5 619 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 VWA7Q9Y334 891 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 PTPRKQ15262 1439 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 CPS1P31327 1500 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 TOPBP1Q92547 1522 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 GRM8O00222 908 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 TRIM24O15164 1050 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 DHX16O60231 1041 aaKnown RBP1.8□□□□□ -2.12
BRCA1-202ENST00000354071 B4GALT4O60513 344 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 SNRPA1P09661 255 aaKnown RBP1.8□□□□□ -2.12
BRCA1-202ENST00000354071 CSH1P0DML2 217 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 CSH2P0DML3 217 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 ACADMP11310 421 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 VDRP11473 427 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 AVPR2P30518 371 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 FOXL2P58012 376 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 ARF3P61204 181 aaPredicted RBP1.8□□□□□ -2.12
BRCA1-202ENST00000354071 ARF1P84077 181 aaKnown RBP1.8□□□□□ -2.12
BRCA1-202ENST00000354071 TCF15Q12870 199 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 CDC16Q13042 620 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 MPP3Q13368 585 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 TAF11Q15544 211 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 MGAT5BQ3V5L5 792 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 LCE1DQ5T752 114 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 GPRIN1Q7Z2K8 1008 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 ADGRA1Q86SQ6 560 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 NKAIN3Q8N8D7 197 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 CXorf38Q8TB03 319 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 KCNJ9Q92806 393 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 SH3KBP1Q96B97 665 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 TRMT61AQ96FX7 289 aaKnown RBP1.8□□□□□ -2.12
BRCA1-202ENST00000354071 JAKMIP1Q96N16 626 aaKnown RBP1.8□□□□□ -2.12
BRCA1-202ENST00000354071 LRRC37BQ96QE4 947 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 SRSF8Q9BRL6 282 aaKnown RBP1.8□□□□□ -2.12
BRCA1-202ENST00000354071 CARD11Q9BXL7 1154 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 EIF2AQ9BY44 585 aaKnown RBP1.8□□□□□ -2.12
BRCA1-202ENST00000354071 TRIM5Q9C035 493 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 CCDC68Q9H2F9 335 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 SLC6A15Q9H2J7 730 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 NSUN3Q9H649 340 aaKnown RBP1.8□□□□□ -2.12
BRCA1-202ENST00000354071 RLIMQ9NVW2 624 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 CTNNAL1Q9UBT7 734 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 SH3BP1Q9Y3L3 701 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 NR2E1Q9Y466 385 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 USP15Q9Y4E8 981 aaPredicted RBP1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms