RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 GFRA2O00451 464 aa15.93■□□□□ 0.14
PRKN-201ENST00000338468 IGLV3-27P01718 113 aa15.93■□□□□ 0.14
PRKN-201ENST00000338468 APODP05090 189 aa15.93■□□□□ 0.14
PRKN-201ENST00000338468 TYRP14679 529 aa15.93■□□□□ 0.14
PRKN-201ENST00000338468 GRIA2P42262 883 aa15.93■□□□□ 0.14
PRKN-201ENST00000338468 KIR2DL1P43626 348 aaPredicted RBP15.93■□□□□ 0.14
PRKN-201ENST00000338468 FNTBP49356 437 aa15.93■□□□□ 0.14
PRKN-201ENST00000338468 NRLP54845 237 aa15.93■□□□□ 0.14
PRKN-201ENST00000338468 SEC13P55735 322 aa15.93■□□□□ 0.14
PRKN-201ENST00000338468 TAF5Q15542 800 aa15.93■□□□□ 0.14
PRKN-201ENST00000338468 ST3GAL2Q16842 350 aa15.93■□□□□ 0.14
PRKN-201ENST00000338468 KLHL40Q2TBA0 621 aa15.93■□□□□ 0.14
PRKN-201ENST00000338468 EMC10Q5UCC4 262 aa15.93■□□□□ 0.14
PRKN-201ENST00000338468 FYB2Q5VWT5 728 aa15.93■□□□□ 0.14
PRKN-201ENST00000338468 C1orf131Q8NDD1 294 aaKnown RBP15.93■□□□□ 0.14
PRKN-201ENST00000338468 DDX1Q92499 740 aaKnown RBP15.93■□□□□ 0.14
PRKN-201ENST00000338468 BHMTQ93088 406 aa15.93■□□□□ 0.14
PRKN-201ENST00000338468 BBS2Q9BXC9 721 aa15.93■□□□□ 0.14
PRKN-201ENST00000338468 STK33Q9BYT3 514 aa15.93■□□□□ 0.14
PRKN-201ENST00000338468 FBXO10Q9UK96 956 aa15.93■□□□□ 0.14
PRKN-201ENST00000338468 NAALADL1Q9UQQ1 740 aa15.93■□□□□ 0.14
PRKN-201ENST00000338468 MAP1BP46821 2468 aaKnown RBP15.92■□□□□ 0.14
PRKN-201ENST00000338468 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.92■□□□□ 0.14
PRKN-201ENST00000338468 ATG13O75143 517 aa15.92■□□□□ 0.14
PRKN-201ENST00000338468 PENKP01210 267 aaPredicted RBP15.92■□□□□ 0.14
PRKN-201ENST00000338468 ADRB1P08588 477 aa15.92■□□□□ 0.14
PRKN-201ENST00000338468 CISD3P0C7P0 127 aa15.92■□□□□ 0.14
PRKN-201ENST00000338468 CYP11B1P15538 503 aa15.92■□□□□ 0.14
PRKN-201ENST00000338468 TGM1P22735 817 aa15.92■□□□□ 0.14
PRKN-201ENST00000338468 JAM2P57087 298 aa15.92■□□□□ 0.14
PRKN-201ENST00000338468 SYCP1Q15431 976 aa15.92■□□□□ 0.14
PRKN-201ENST00000338468 C2orf27AQ580R0 203 aa15.92■□□□□ 0.14
PRKN-201ENST00000338468 SYPL2Q5VXT5 272 aa15.92■□□□□ 0.14
PRKN-201ENST00000338468 LAIR1Q6GTX8 287 aa15.92■□□□□ 0.14
PRKN-201ENST00000338468 TOGARAM2Q6ZUX3 1019 aa15.92■□□□□ 0.14
PRKN-201ENST00000338468 BEND5Q7L4P6 421 aa15.92■□□□□ 0.14
PRKN-201ENST00000338468 SYT13Q7L8C5 426 aa15.92■□□□□ 0.14
PRKN-201ENST00000338468 CPXM2Q8N436 756 aa15.92■□□□□ 0.14
PRKN-201ENST00000338468 TERB1Q8NA31 727 aa15.92■□□□□ 0.14
PRKN-201ENST00000338468 DQX1Q8TE96 717 aaKnown RBP15.92■□□□□ 0.14
PRKN-201ENST00000338468 PPP1R13BQ96KQ4 1090 aa15.92■□□□□ 0.14
PRKN-201ENST00000338468 PARD6AQ9NPB6 346 aa15.92■□□□□ 0.14
PRKN-201ENST00000338468 FAM207AQ9NSI2 230 aaPredicted RBP15.92■□□□□ 0.14
PRKN-201ENST00000338468 DNAJC17Q9NVM6 304 aaKnown RBP15.92■□□□□ 0.14
PRKN-201ENST00000338468 PLK2Q9NYY3 685 aa15.92■□□□□ 0.14
PRKN-201ENST00000338468 WDR35Q9P2L0 1181 aa15.92■□□□□ 0.14
PRKN-201ENST00000338468 DEC1Q9P2X7 70 aa15.92■□□□□ 0.14
PRKN-201ENST00000338468 STOML2Q9UJZ1 356 aa15.92■□□□□ 0.14
PRKN-201ENST00000338468 SART1O43290 800 aaKnown RBP15.91■□□□□ 0.14
PRKN-201ENST00000338468 HRO43593 1189 aa15.91■□□□□ 0.14
PRKN-201ENST00000338468 ERBB2P04626 1255 aa15.91■□□□□ 0.14
PRKN-201ENST00000338468 NCAM1P13591 858 aa15.91■□□□□ 0.14
PRKN-201ENST00000338468 HNRNPLP14866 589 aaKnown RBP eCLIP15.91■□□□□ 0.144e-9■■■■■ 41.8
PRKN-201ENST00000338468 CDH5P33151 784 aaPredicted RBP15.91■□□□□ 0.14
PRKN-201ENST00000338468 KRT9P35527 623 aa15.91■□□□□ 0.14
PRKN-201ENST00000338468 TNFRSF4P43489 277 aa15.91■□□□□ 0.14
PRKN-201ENST00000338468 PXNP49023 591 aaPredicted RBP15.91■□□□□ 0.14
PRKN-201ENST00000338468 BPIFB4P59827 614 aa15.91■□□□□ 0.14
PRKN-201ENST00000338468 POLR2FP61218 127 aaKnown RBP15.91■□□□□ 0.14
PRKN-201ENST00000338468 MRPS21P82921 87 aaKnown RBP15.91■□□□□ 0.14
PRKN-201ENST00000338468 SRSF5Q13243 272 aaKnown RBP15.91■□□□□ 0.14
PRKN-201ENST00000338468 DMC1Q14565 340 aa15.91■□□□□ 0.14
PRKN-201ENST00000338468 PTPN20Q4JDL3 420 aa15.91■□□□□ 0.14
PRKN-201ENST00000338468 FKBP15Q5T1M5 1219 aa15.91■□□□□ 0.14
PRKN-201ENST00000338468 HEATR6Q6AI08 1181 aaKnown RBP15.91■□□□□ 0.14
PRKN-201ENST00000338468 NOP9Q86U38 636 aaKnown RBP15.91■□□□□ 0.14
PRKN-201ENST00000338468 CCDC33Q8N5R6 958 aa15.91■□□□□ 0.14
PRKN-201ENST00000338468 IL17RCQ8NAC3 791 aa15.91■□□□□ 0.14
PRKN-201ENST00000338468 NETO1Q8TDF5 533 aa15.91■□□□□ 0.14
PRKN-201ENST00000338468 FAM149B1Q96BN6 582 aa15.91■□□□□ 0.14
PRKN-201ENST00000338468 HHIPQ96QV1 700 aa15.91■□□□□ 0.14
PRKN-201ENST00000338468 ZDHHC4Q9NPG8 344 aa15.91■□□□□ 0.14
PRKN-201ENST00000338468 CLEC4EQ9ULY5 219 aa15.91■□□□□ 0.14
PRKN-201ENST00000338468 SLC8A2Q9UPR5 921 aa15.91■□□□□ 0.14
PRKN-201ENST00000338468 PRRT4C9JH25 899 aa15.9■□□□□ 0.14
PRKN-201ENST00000338468 ADAM23O75077 832 aa15.9■□□□□ 0.14
PRKN-201ENST00000338468 IGLV3-25P01717 112 aa15.9■□□□□ 0.14
PRKN-201ENST00000338468 TPM2P07951 284 aa15.9■□□□□ 0.14
PRKN-201ENST00000338468 CDK11BP21127 795 aaKnown RBP15.9■□□□□ 0.14
PRKN-201ENST00000338468 CHKAP35790 457 aa15.9■□□□□ 0.14
PRKN-201ENST00000338468 HARS2P49590 506 aaKnown RBP15.9■□□□□ 0.14
PRKN-201ENST00000338468 PITX1P78337 314 aaPredicted RBP15.9■□□□□ 0.14
PRKN-201ENST00000338468 RING1Q06587 406 aa15.9■□□□□ 0.14
PRKN-201ENST00000338468 SPEM2Q0P670 501 aa15.9■□□□□ 0.14
PRKN-201ENST00000338468 IQCB1Q15051 598 aa15.9■□□□□ 0.14
PRKN-201ENST00000338468 GRAMD4Q6IC98 578 aa15.9■□□□□ 0.14
PRKN-201ENST00000338468 FAM183BPQ6ZVS7 135 aa15.9■□□□□ 0.14
PRKN-201ENST00000338468 TAC4Q86UU9 113 aa15.9■□□□□ 0.14
PRKN-201ENST00000338468 WDR5BQ86VZ2 330 aa15.9■□□□□ 0.14
PRKN-201ENST00000338468 LONP2Q86WA8 852 aa15.9■□□□□ 0.14
PRKN-201ENST00000338468 ALLCQ8N6M5 410 aa15.9■□□□□ 0.14
PRKN-201ENST00000338468 ADAM32Q8TC27 787 aa15.9■□□□□ 0.14
PRKN-201ENST00000338468 EPS8L1Q8TE68 723 aa15.9■□□□□ 0.14
PRKN-201ENST00000338468 GOLGA1Q92805 767 aa15.9■□□□□ 0.14
PRKN-201ENST00000338468 ACDQ96AP0 544 aa15.9■□□□□ 0.14
PRKN-201ENST00000338468 SLC39A13Q96H72 371 aa15.9■□□□□ 0.14
PRKN-201ENST00000338468 FCRL2Q96LA5 508 aaPredicted RBP15.9■□□□□ 0.14
PRKN-201ENST00000338468 XPO6Q96QU8 1125 aaKnown RBP15.9■□□□□ 0.14
PRKN-201ENST00000338468 ERGIC2Q96RQ1 377 aa15.9■□□□□ 0.14
PRKN-201ENST00000338468 NAT10Q9H0A0 1025 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms