RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 PSMB4P28070 264 aa9.16□□□□□ -0.94
SNCA-201ENST00000336904 ELF3P78545 371 aaPredicted RBP9.16□□□□□ -0.94
SNCA-201ENST00000336904 MTFR1Q15390 333 aa9.16□□□□□ -0.94
SNCA-201ENST00000336904 BOLA3Q53S33 107 aa9.16□□□□□ -0.94
SNCA-201ENST00000336904 HEATR6Q6AI08 1181 aaKnown RBP9.16□□□□□ -0.94
SNCA-201ENST00000336904 UNC5AQ6ZN44 842 aa9.16□□□□□ -0.94
SNCA-201ENST00000336904 CLEC20AQ6ZU45 233 aa9.16□□□□□ -0.94
SNCA-201ENST00000336904 SIX6OS1Q8N1H7 587 aa9.16□□□□□ -0.94
SNCA-201ENST00000336904 ARMC2Q8NEN0 867 aa9.16□□□□□ -0.94
SNCA-201ENST00000336904 AZIN2Q96A70 460 aa9.16□□□□□ -0.94
SNCA-201ENST00000336904 KLHL29Q96CT2 875 aa9.16□□□□□ -0.94
SNCA-201ENST00000336904 TACO1Q9BSH4 297 aaKnown RBP9.16□□□□□ -0.94
SNCA-201ENST00000336904 SIK2Q9H0K1 926 aa9.16□□□□□ -0.94
SNCA-201ENST00000336904 POPDC2Q9HBU9 364 aa9.16□□□□□ -0.94
SNCA-201ENST00000336904 CHKBQ9Y259 395 aa9.16□□□□□ -0.94
SNCA-201ENST00000336904 ARL2BPQ9Y2Y0 163 aa9.16□□□□□ -0.94
SNCA-201ENST00000336904 MBLAC1A4D2B0 266 aaPredicted RBP9.15□□□□□ -0.94
SNCA-201ENST00000336904 AP1G2O75843 785 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 NCAM1P13591 858 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 ELNP15502 786 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 CD52P31358 61 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 CPA2P48052 419 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 PGFP49763 221 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 PURAQ00577 322 aaKnown RBP9.15□□□□□ -0.94
SNCA-201ENST00000336904 CRHR2Q13324 411 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 ITIH4Q14624 930 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 MORN1Q5T089 497 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 CES4AQ5XG92 561 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 ZNF534Q76KX8 674 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 PCGF5Q86SE9 256 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 TTC7BQ86TV6 843 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 VSIG1Q86XK7 387 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 RELL1Q8IUW5 271 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 PARP9Q8IXQ6 854 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 GSTCDQ8NEC7 633 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 MZB1Q8WU39 189 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 PCED1BQ96HM7 432 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 SENP8Q96LD8 212 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 UNKQ9C0B0 810 aaKnown RBP9.15□□□□□ -0.94
SNCA-201ENST00000336904 KDM4CQ9H3R0 1056 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 ARHGEF4Q9NR80 690 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 SLC12A4Q9UP95 1085 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 PSAT1Q9Y617 370 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 SHROOM3Q8TF72 1996 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 PDE4DIPQ5VU43 2346 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 SLC15A5A6NIM6 579 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 SRRM3A6NNA2 597 aaPredicted RBP9.15□□□□□ -0.94
SNCA-201ENST00000336904 SRGAP2BP0DMP2 458 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 TPH1P17752 444 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 MGAT1P26572 445 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 NR1H3Q13133 447 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 SLC9A4Q6AI14 798 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 ADGRD1Q6QNK2 874 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 DSTYKQ6XUX3 929 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 RFX8Q6ZV50 586 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 MTDHQ86UE4 582 aaKnown RBP9.15□□□□□ -0.94
SNCA-201ENST00000336904 KIRREL3Q8IZU9 778 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 VPS52Q8N1B4 723 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 SCAMP5Q8TAC9 235 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 CYTH2Q99418 400 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 KLC2Q9H0B6 622 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 TSPYL2Q9H2G4 693 aaPredicted RBP9.15□□□□□ -0.94
SNCA-201ENST00000336904 ARMCX1Q9P291 453 aa9.15□□□□□ -0.94
SNCA-201ENST00000336904 ZMYND8Q9ULU4 1186 aaPredicted RBP9.15□□□□□ -0.94
SNCA-201ENST00000336904 RNF103O00237 685 aa9.15□□□□□ -0.95
SNCA-201ENST00000336904 MGEA5O60502 916 aa9.15□□□□□ -0.95
SNCA-201ENST00000336904 BDNFP23560 247 aa9.15□□□□□ -0.95
SNCA-201ENST00000336904 CDC25CP30307 473 aa9.15□□□□□ -0.95
SNCA-201ENST00000336904 THPOP40225 353 aa9.15□□□□□ -0.95
SNCA-201ENST00000336904 DEUP1Q05D60 604 aa9.15□□□□□ -0.95
SNCA-201ENST00000336904 ZNF467Q7Z7K2 595 aaPredicted RBP9.15□□□□□ -0.95
SNCA-201ENST00000336904 LRRC52Q8N7C0 313 aa9.15□□□□□ -0.95
SNCA-201ENST00000336904 COLGALT1Q8NBJ5 622 aa9.15□□□□□ -0.95
SNCA-201ENST00000336904 KCNV2Q8TDN2 545 aa9.15□□□□□ -0.95
SNCA-201ENST00000336904 GPR152Q8TDT2 470 aa9.15□□□□□ -0.95
SNCA-201ENST00000336904 SGSM3Q96HU1 749 aa9.15□□□□□ -0.95
SNCA-201ENST00000336904 PRDM12Q9H4Q4 367 aa9.15□□□□□ -0.95
SNCA-201ENST00000336904 PLEKHA5Q9HAU0 1116 aa9.15□□□□□ -0.95
SNCA-201ENST00000336904 DDIT4Q9NX09 232 aa9.15□□□□□ -0.95
SNCA-201ENST00000336904 PAK5Q9P286 719 aa9.15□□□□□ -0.95
SNCA-201ENST00000336904 MSI1O43347 362 aaKnown RBP9.14□□□□□ -0.95
SNCA-201ENST00000336904 B3GAT3O94766 335 aa9.14□□□□□ -0.95
SNCA-201ENST00000336904 CHRNA1P02708 482 aa9.14□□□□□ -0.95
SNCA-201ENST00000336904 FYNP06241 537 aa9.14□□□□□ -0.95
SNCA-201ENST00000336904 ERVK-10P10266 1014 aa9.14□□□□□ -0.95
SNCA-201ENST00000336904 NPR3P17342 541 aa9.14□□□□□ -0.95
SNCA-201ENST00000336904 SAT1P21673 171 aa9.14□□□□□ -0.95
SNCA-201ENST00000336904 STIP1P31948 543 aaKnown RBP9.14□□□□□ -0.95
SNCA-201ENST00000336904 ARL4AP40617 200 aa9.14□□□□□ -0.95
SNCA-201ENST00000336904 ADAM17P78536 824 aa9.14□□□□□ -0.95
SNCA-201ENST00000336904 PDK2Q15119 407 aa9.14□□□□□ -0.95
SNCA-201ENST00000336904 TAF1BQ53T94 588 aaPredicted RBP9.14□□□□□ -0.95
SNCA-201ENST00000336904 SLC45A4Q5BKX6 768 aa9.14□□□□□ -0.95
SNCA-201ENST00000336904 ANKRD20A2Q5SQ80 823 aa9.14□□□□□ -0.95
SNCA-201ENST00000336904 ANKRD20A1Q5TYW2 823 aa9.14□□□□□ -0.95
SNCA-201ENST00000336904 ANKRD20A3Q5VUR7 823 aa9.14□□□□□ -0.95
SNCA-201ENST00000336904 SLC26A9Q7LBE3 791 aa9.14□□□□□ -0.95
SNCA-201ENST00000336904 NPWQ8N729 165 aa9.14□□□□□ -0.95
SNCA-201ENST00000336904 BANPQ8N9N5 519 aa9.14□□□□□ -0.95
SNCA-201ENST00000336904 RNF139Q8WU17 664 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms