RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 ANKRD20A3Q5VUR7 823 aa15.43■□□□□ 0.06
CHFR-202ENST00000315585 HEATR6Q6AI08 1181 aaKnown RBP15.43■□□□□ 0.06
CHFR-202ENST00000315585 CFAP61Q8NHU2 1237 aa15.43■□□□□ 0.06
CHFR-202ENST00000315585 GSDMBQ8TAX9 411 aa15.43■□□□□ 0.06
CHFR-202ENST00000315585 PPP1R13LQ8WUF5 828 aa15.43■□□□□ 0.06
CHFR-202ENST00000315585 TMEM40Q8WWA1 233 aa15.43■□□□□ 0.06
CHFR-202ENST00000315585 CFAP36Q96G28 342 aa15.43■□□□□ 0.06
CHFR-202ENST00000315585 SNX25Q9H3E2 840 aa15.43■□□□□ 0.06
CHFR-202ENST00000315585 NXF3Q9H4D5 531 aaKnown RBP15.43■□□□□ 0.06
CHFR-202ENST00000315585 XPNPEP3Q9NQH7 507 aa15.43■□□□□ 0.06
CHFR-202ENST00000315585 CASP8AP2Q9UKL3 1982 aa15.43■□□□□ 0.06
CHFR-202ENST00000315585 GOLGA8RI6L899 631 aa15.43■□□□□ 0.06
CHFR-202ENST00000315585 PIK3R2O00459 728 aa15.43■□□□□ 0.06
CHFR-202ENST00000315585 CCDC22O60826 627 aa15.43■□□□□ 0.06
CHFR-202ENST00000315585 LMNAP02545 664 aaKnown RBP15.43■□□□□ 0.06
CHFR-202ENST00000315585 PYGBP11216 843 aa15.43■□□□□ 0.06
CHFR-202ENST00000315585 MLNP12872 115 aa15.43■□□□□ 0.06
CHFR-202ENST00000315585 ETV4P43268 484 aa15.43■□□□□ 0.06
CHFR-202ENST00000315585 RPL34P49207 117 aaKnown RBP15.43■□□□□ 0.06
CHFR-202ENST00000315585 HDAC4P56524 1084 aa15.43■□□□□ 0.06
CHFR-202ENST00000315585 DBN1Q16643 649 aa15.43■□□□□ 0.06
CHFR-202ENST00000315585 XKR4Q5GH76 650 aa15.43■□□□□ 0.06
CHFR-202ENST00000315585 FBXO47Q5MNV8 452 aa15.43■□□□□ 0.06
CHFR-202ENST00000315585 CXCL17Q6UXB2 119 aa15.43■□□□□ 0.06
CHFR-202ENST00000315585 PPM1NQ8N819 430 aa15.43■□□□□ 0.06
CHFR-202ENST00000315585 PCSK9Q8NBP7 692 aaKnown RBP15.43■□□□□ 0.06
CHFR-202ENST00000315585 AGAP11Q8TF27 550 aa15.43■□□□□ 0.06
CHFR-202ENST00000315585 CHST12Q9NRB3 414 aa15.43■□□□□ 0.06
CHFR-202ENST00000315585 WDR91A4D1P6 747 aa15.42■□□□□ 0.06
CHFR-202ENST00000315585 HGSO14964 777 aaPredicted RBP15.42■□□□□ 0.06
CHFR-202ENST00000315585 DNAJC6O75061 913 aa15.42■□□□□ 0.06
CHFR-202ENST00000315585 PGK1P00558 417 aa15.42■□□□□ 0.06
CHFR-202ENST00000315585 FAM163BP0C2L3 166 aa15.42■□□□□ 0.06
CHFR-202ENST00000315585 L1CAMP32004 1257 aa15.42■□□□□ 0.06
CHFR-202ENST00000315585 GNL1P36915 607 aaPredicted RBP15.42■□□□□ 0.06
CHFR-202ENST00000315585 ZBTB16Q05516 673 aa15.42■□□□□ 0.06
CHFR-202ENST00000315585 CACNB2Q08289 660 aaPredicted RBP15.42■□□□□ 0.06
CHFR-202ENST00000315585 DEFB115Q30KQ5 88 aa15.42■□□□□ 0.06
CHFR-202ENST00000315585 TAF1BQ53T94 588 aaPredicted RBP15.42■□□□□ 0.06
CHFR-202ENST00000315585 C9orf57Q5W0N0 161 aa15.42■□□□□ 0.06
CHFR-202ENST00000315585 TWF2Q6IBS0 349 aaKnown RBP15.42■□□□□ 0.06
CHFR-202ENST00000315585 IGDCC3Q8IVU1 814 aa15.42■□□□□ 0.06
CHFR-202ENST00000315585 ZNF276Q8N554 614 aa15.42■□□□□ 0.06
CHFR-202ENST00000315585 ZMAT2Q96NC0 199 aaKnown RBP15.42■□□□□ 0.06
CHFR-202ENST00000315585 MYCBPQ99417 103 aaPredicted RBP15.42■□□□□ 0.06
CHFR-202ENST00000315585 NAT9Q9BTE0 207 aa15.42■□□□□ 0.06
CHFR-202ENST00000315585 APOL6Q9BWW8 343 aa15.42■□□□□ 0.06
CHFR-202ENST00000315585 DHX35Q9H5Z1 703 aaKnown RBP15.42■□□□□ 0.06
CHFR-202ENST00000315585 POPDC2Q9HBU9 364 aa15.42■□□□□ 0.06
CHFR-202ENST00000315585 FAM49BQ9NUQ9 324 aa15.42■□□□□ 0.06
CHFR-202ENST00000315585 GDAP2Q9NXN4 497 aa15.42■□□□□ 0.06
CHFR-202ENST00000315585 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.42■□□□□ 0.06
CHFR-202ENST00000315585 SLC17A7Q9P2U7 560 aa15.42■□□□□ 0.06
CHFR-202ENST00000315585 AP4E1Q9UPM8 1137 aa15.42■□□□□ 0.06
CHFR-202ENST00000315585 ANP32DO95626 131 aa15.42■□□□□ 0.06
CHFR-202ENST00000315585 TARSP26639 723 aaKnown RBP15.42■□□□□ 0.06
CHFR-202ENST00000315585 CDK18Q07002 472 aa15.42■□□□□ 0.06
CHFR-202ENST00000315585 WASHC2DQ5SRD0 308 aa15.42■□□□□ 0.06
CHFR-202ENST00000315585 CLNKQ7Z7G1 428 aa15.42■□□□□ 0.06
CHFR-202ENST00000315585 CDKL2Q92772 493 aa15.42■□□□□ 0.06
CHFR-202ENST00000315585 KHSRPQ92945 711 aaKnown RBP eCLIP15.42■□□□□ 0.06
CHFR-202ENST00000315585 PIWIL1Q96J94 861 aaKnown RBP15.42■□□□□ 0.06
CHFR-202ENST00000315585 FAM111AQ96PZ2 611 aa15.42■□□□□ 0.06
CHFR-202ENST00000315585 EBNA1BP2Q99848 306 aaKnown RBP15.42■□□□□ 0.06
CHFR-202ENST00000315585 ADAM33Q9BZ11 813 aa15.42■□□□□ 0.06
CHFR-202ENST00000315585 HAO1Q9UJM8 370 aa15.42■□□□□ 0.06
CHFR-202ENST00000315585 HES2Q9Y543 173 aa15.42■□□□□ 0.06
CHFR-202ENST00000315585 CDY2AQ9Y6F7 541 aa15.42■□□□□ 0.06
CHFR-202ENST00000315585 TRIM49D1C9J1S8 452 aa15.41■□□□□ 0.06
CHFR-202ENST00000315585 ADAMTS4O75173 837 aa15.41■□□□□ 0.06
CHFR-202ENST00000315585 CST5P28325 142 aaPredicted RBP15.41■□□□□ 0.06
CHFR-202ENST00000315585 SERPINB4P48594 390 aa15.41■□□□□ 0.06
CHFR-202ENST00000315585 PRKD1Q15139 912 aaPredicted RBP15.41■□□□□ 0.06
CHFR-202ENST00000315585 SV2CQ496J9 727 aa15.41■□□□□ 0.06
CHFR-202ENST00000315585 UBXN11Q5T124 520 aa15.41■□□□□ 0.06
CHFR-202ENST00000315585 SH2D5Q6ZV89 423 aa15.41■□□□□ 0.06
CHFR-202ENST00000315585 CAND1Q86VP6 1230 aaKnown RBP15.41■□□□□ 0.06
CHFR-202ENST00000315585 ANKLE1Q8NAG6 615 aa15.41■□□□□ 0.06
CHFR-202ENST00000315585 TFB1MQ8WVM0 346 aaKnown RBP15.41■□□□□ 0.06
CHFR-202ENST00000315585 TTC17Q96AE7 1141 aa15.41■□□□□ 0.06
CHFR-202ENST00000315585 THOC1Q96FV9 657 aaKnown RBP15.41■□□□□ 0.06
CHFR-202ENST00000315585 SERAC1Q96JX3 654 aa15.41■□□□□ 0.06
CHFR-202ENST00000315585 QKIQ96PU8 341 aaKnown RBP eCLIP15.41■□□□□ 0.06
CHFR-202ENST00000315585 SRPK1Q96SB4 655 aaKnown RBP15.41■□□□□ 0.06
CHFR-202ENST00000315585 C11orf84Q9BUA3 381 aaPredicted RBP15.41■□□□□ 0.06
CHFR-202ENST00000315585 PLLPQ9Y342 182 aa15.41■□□□□ 0.06
CHFR-202ENST00000315585 TTLL3Q9Y4R7 772 aa15.41■□□□□ 0.06
CHFR-202ENST00000315585 IPPQ9Y573 584 aa15.41■□□□□ 0.06
CHFR-202ENST00000315585 SMIM28A0A1B0GU29 152 aa15.41■□□□□ 0.06
CHFR-202ENST00000315585 KPNA7A9QM74 516 aa15.41■□□□□ 0.06
CHFR-202ENST00000315585 HAUS5O94927 633 aa15.41■□□□□ 0.06
CHFR-202ENST00000315585 AKAP5P24588 427 aa15.41■□□□□ 0.06
CHFR-202ENST00000315585 MAGEA3P43357 314 aa15.41■□□□□ 0.06
CHFR-202ENST00000315585 NAB1Q13506 487 aa15.41■□□□□ 0.06
CHFR-202ENST00000315585 SEMA5AQ13591 1074 aa15.41■□□□□ 0.06
CHFR-202ENST00000315585 SOWAHAQ2M3V2 549 aa15.41■□□□□ 0.06
CHFR-202ENST00000315585 MTDHQ86UE4 582 aaKnown RBP15.41■□□□□ 0.06
CHFR-202ENST00000315585 SERINC5Q86VE9 423 aa15.41■□□□□ 0.06
CHFR-202ENST00000315585 APPL2Q8NEU8 664 aa15.41■□□□□ 0.06
CHFR-202ENST00000315585 CAPNS2Q96L46 248 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms