RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 CCDC114Q96M63 670 aa23.38■■□□□ 1.33
IRF3-201ENST00000309877 KLHL5Q96PQ7 755 aa23.38■■□□□ 1.33
IRF3-201ENST00000309877 UBE2OQ9C0C9 1292 aaKnown RBP23.38■■□□□ 1.33
IRF3-201ENST00000309877 RAB17Q9H0T7 212 aa23.38■■□□□ 1.33
IRF3-201ENST00000309877 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.38■■□□□ 1.33
IRF3-201ENST00000309877 RCOR3Q9P2K3 495 aaPredicted RBP23.38■■□□□ 1.33
IRF3-201ENST00000309877 H3BRJ5 948 aa23.38■■□□□ 1.33
IRF3-201ENST00000309877 APOC4-APOC2K7ER74 178 aa23.38■■□□□ 1.33
IRF3-201ENST00000309877 APOL1O14791 398 aa23.38■■□□□ 1.33
IRF3-201ENST00000309877 LIASO43766 372 aa23.38■■□□□ 1.33
IRF3-201ENST00000309877 LPXNO60711 386 aa23.38■■□□□ 1.33
IRF3-201ENST00000309877 ERLIN1O75477 346 aa23.38■■□□□ 1.33
IRF3-201ENST00000309877 CSPG5O95196 566 aa23.38■■□□□ 1.33
IRF3-201ENST00000309877 APOC2P02655 101 aa23.38■■□□□ 1.33
IRF3-201ENST00000309877 RB1P06400 928 aa23.38■■□□□ 1.33
IRF3-201ENST00000309877 KLRC2P26717 231 aa23.38■■□□□ 1.33
IRF3-201ENST00000309877 CCR1P32246 355 aa23.38■■□□□ 1.33
IRF3-201ENST00000309877 PTGIRP43119 386 aa23.38■■□□□ 1.33
IRF3-201ENST00000309877 PLPP4Q5VZY2 271 aa23.38■■□□□ 1.33
IRF3-201ENST00000309877 MICAL1Q8TDZ2 1067 aa23.38■■□□□ 1.33
IRF3-201ENST00000309877 OVCA2Q8WZ82 227 aa23.38■■□□□ 1.33
IRF3-201ENST00000309877 FAF2Q96CS3 445 aa23.38■■□□□ 1.33
IRF3-201ENST00000309877 ZNF512Q96ME7 567 aaPredicted RBP23.38■■□□□ 1.33
IRF3-201ENST00000309877 TLR9Q9NR96 1032 aa23.38■■□□□ 1.33
IRF3-201ENST00000309877 CWC15Q9P013 229 aaKnown RBP23.38■■□□□ 1.33
IRF3-201ENST00000309877 INSL5Q9Y5Q6 135 aa23.38■■□□□ 1.33
IRF3-201ENST00000309877 IRAK3Q9Y616 596 aa23.38■■□□□ 1.33
IRF3-201ENST00000309877 MYO16Q9Y6X6 1858 aa23.38■■□□□ 1.33
IRF3-201ENST00000309877 PLXNA3P51805 1871 aa23.37■■□□□ 1.33
IRF3-201ENST00000309877 C5orf67F2Z3F1 127 aa23.37■■□□□ 1.33
IRF3-201ENST00000309877 MSI1O43347 362 aaKnown RBP23.37■■□□□ 1.33
IRF3-201ENST00000309877 TGM5O43548 720 aa23.37■■□□□ 1.33
IRF3-201ENST00000309877 ZDHHC11BP0C7U3 371 aa23.37■■□□□ 1.33
IRF3-201ENST00000309877 SPATA31D3P0C874 917 aa23.37■■□□□ 1.33
IRF3-201ENST00000309877 OTUD4Q01804 1114 aaKnown RBP23.37■■□□□ 1.33
IRF3-201ENST00000309877 EFEMP1Q12805 493 aa23.37■■□□□ 1.33
IRF3-201ENST00000309877 EIF4EBP2Q13542 120 aaPredicted RBP23.37■■□□□ 1.33
IRF3-201ENST00000309877 BYSLQ13895 437 aaKnown RBP23.37■■□□□ 1.33
IRF3-201ENST00000309877 BRMS1LQ5PSV4 323 aa23.37■■□□□ 1.33
IRF3-201ENST00000309877 C10orf120Q5SQS8 335 aa23.37■■□□□ 1.33
IRF3-201ENST00000309877 FAM109BQ6ICB4 259 aaPredicted RBP23.37■■□□□ 1.33
IRF3-201ENST00000309877 DRICH1Q6PGQ1 229 aaPredicted RBP23.37■■□□□ 1.33
IRF3-201ENST00000309877 SPATA31D4Q6ZUB0 917 aa23.37■■□□□ 1.33
IRF3-201ENST00000309877 PCDH19Q8TAB3 1148 aa23.37■■□□□ 1.33
IRF3-201ENST00000309877 ACTL9Q8TC94 416 aa23.37■■□□□ 1.33
IRF3-201ENST00000309877 CSPG4P5Q96PW8 444 aa23.37■■□□□ 1.33
IRF3-201ENST00000309877 TRIM51Q9BSJ1 452 aa23.37■■□□□ 1.33
IRF3-201ENST00000309877 GDF3Q9NR23 364 aa23.37■■□□□ 1.33
IRF3-201ENST00000309877 SAE1Q9UBE0 346 aaPredicted RBP23.37■■□□□ 1.33
IRF3-201ENST00000309877 CCDC151A5D8V7 595 aa23.36■■□□□ 1.33
IRF3-201ENST00000309877 ZSCAN5CA6NGD5 496 aaPredicted RBP23.36■■□□□ 1.33
IRF3-201ENST00000309877 CREB3O43889 395 aa23.36■■□□□ 1.33
IRF3-201ENST00000309877 CA3P07451 260 aa23.36■■□□□ 1.33
IRF3-201ENST00000309877 ZFXP17010 805 aaPredicted RBP23.36■■□□□ 1.33
IRF3-201ENST00000309877 HMGA1P17096 107 aaKnown RBP23.36■■□□□ 1.33
IRF3-201ENST00000309877 GOT1P17174 413 aa23.36■■□□□ 1.33
IRF3-201ENST00000309877 LMNB2Q03252 620 aa23.36■■□□□ 1.33
IRF3-201ENST00000309877 PLD1Q13393 1074 aa23.36■■□□□ 1.33
IRF3-201ENST00000309877 PPP1R7Q15435 360 aa23.36■■□□□ 1.33
IRF3-201ENST00000309877 CCNI2Q6ZMN8 369 aaPredicted RBP23.36■■□□□ 1.33
IRF3-201ENST00000309877 PQLC3Q8N755 202 aa23.36■■□□□ 1.33
IRF3-201ENST00000309877 MRPL43Q8N983 215 aaKnown RBP23.36■■□□□ 1.33
IRF3-201ENST00000309877 IFT81Q8WYA0 676 aa23.36■■□□□ 1.33
IRF3-201ENST00000309877 P3H4Q92791 437 aa23.36■■□□□ 1.33
IRF3-201ENST00000309877 DNPEPQ9ULA0 475 aa23.36■■□□□ 1.33
IRF3-201ENST00000309877 ZNF148Q9UQR1 794 aa23.36■■□□□ 1.33
IRF3-201ENST00000309877 ESYT3A0FGR9 886 aa23.35■■□□□ 1.33
IRF3-201ENST00000309877 EEF2KO00418 725 aaKnown RBP23.35■■□□□ 1.33
IRF3-201ENST00000309877 ARHGEF15O94989 841 aa23.35■■□□□ 1.33
IRF3-201ENST00000309877 GAS8O95995 478 aa23.35■■□□□ 1.33
IRF3-201ENST00000309877 TGM2P21980 687 aa23.35■■□□□ 1.33
IRF3-201ENST00000309877 PPP2R5DQ14738 602 aa23.35■■□□□ 1.33
IRF3-201ENST00000309877 SLC9A4Q6AI14 798 aa23.35■■□□□ 1.33
IRF3-201ENST00000309877 C1orf228Q6PIY5 440 aa23.35■■□□□ 1.33
IRF3-201ENST00000309877 SLCO2A1Q92959 643 aa23.35■■□□□ 1.33
IRF3-201ENST00000309877 MYRFLQ96LU7 910 aa23.35■■□□□ 1.33
IRF3-201ENST00000309877 CDK5RAP1Q96SZ6 601 aaKnown RBP23.35■■□□□ 1.33
IRF3-201ENST00000309877 ERP44Q9BS26 406 aa23.35■■□□□ 1.33
IRF3-201ENST00000309877 ANLNQ9NQW6 1124 aa23.35■■□□□ 1.33
IRF3-201ENST00000309877 ARHGEF38Q9NXL2 777 aa23.35■■□□□ 1.33
IRF3-201ENST00000309877 TRPM5Q9NZQ8 1165 aa23.35■■□□□ 1.33
IRF3-201ENST00000309877 TLR6Q9Y2C9 796 aa23.35■■□□□ 1.33
IRF3-201ENST00000309877 C2orf71A6NGG8 1288 aa23.35■■□□□ 1.33
IRF3-201ENST00000309877 DAPK3O43293 454 aa23.35■■□□□ 1.33
IRF3-201ENST00000309877 TLR5O60602 858 aa23.35■■□□□ 1.33
IRF3-201ENST00000309877 TBX18O95935 607 aa23.35■■□□□ 1.33
IRF3-201ENST00000309877 SLC2A3P11169 496 aa23.35■■□□□ 1.33
IRF3-201ENST00000309877 DNAJB1P25685 340 aa23.35■■□□□ 1.33
IRF3-201ENST00000309877 VCPP55072 806 aaKnown RBP23.35■■□□□ 1.33
IRF3-201ENST00000309877 CCDC149Q6ZUS6 474 aa23.35■■□□□ 1.33
IRF3-201ENST00000309877 SYDE1Q6ZW31 735 aaPredicted RBP23.35■■□□□ 1.33
IRF3-201ENST00000309877 GSTA5Q7RTV2 222 aa23.35■■□□□ 1.33
IRF3-201ENST00000309877 SPRED2Q7Z698 418 aa23.35■■□□□ 1.33
IRF3-201ENST00000309877 TADA2BQ86TJ2 420 aa23.35■■□□□ 1.33
IRF3-201ENST00000309877 ITIH5Q86UX2 942 aa23.35■■□□□ 1.33
IRF3-201ENST00000309877 PLD5Q8N7P1 536 aa23.35■■□□□ 1.33
IRF3-201ENST00000309877 CASKIN2Q8WXE0 1202 aa23.35■■□□□ 1.33
IRF3-201ENST00000309877 NKD2Q969F2 451 aaPredicted RBP23.35■■□□□ 1.33
IRF3-201ENST00000309877 TRMT2BQ96GJ1 504 aaKnown RBP23.35■■□□□ 1.33
IRF3-201ENST00000309877 SAMD11Q96NU1 681 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms