RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 NEU2Q9Y3R4 380 aa10.79□□□□□ -0.68
MSRB3-201ENST00000308259 E9PBE3 544 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 TCF7P36402 384 aaPredicted RBP10.78□□□□□ -0.68
MSRB3-201ENST00000308259 MAP3K10Q02779 954 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 MTMR1Q13613 665 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 ACVR2BQ13705 512 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 HABP4Q5JVS0 413 aaKnown RBP10.78□□□□□ -0.68
MSRB3-201ENST00000308259 LDLRAP1Q5SW96 308 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 BBS5Q8N3I7 341 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 APPL2Q8NEU8 664 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 ZNF75CPQ92670 426 aaPredicted RBP10.78□□□□□ -0.68
MSRB3-201ENST00000308259 TRPV6Q9H1D0 765 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 WNT8AQ9H1J5 351 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 MANSC1Q9H8J5 431 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 RRAGCQ9HB90 399 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 FAM47E-STBD1D6RA91 191 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 SIN3BO75182 1162 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 P4HBP07237 508 aaKnown RBP10.78□□□□□ -0.68
MSRB3-201ENST00000308259 HSPA6P17066 643 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 POLR2EP19388 210 aaKnown RBP10.78□□□□□ -0.68
MSRB3-201ENST00000308259 MAGEA4P43358 317 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 GTF2A2P52657 109 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 NKX2-5P52952 324 aaPredicted RBP10.78□□□□□ -0.68
MSRB3-201ENST00000308259 MFAP3P55082 362 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 FKBP1BP68106 108 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 TRPC3Q13507 836 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 ADRM1Q16186 407 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 TRAF7Q6Q0C0 670 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 CYFIP1Q7L576 1253 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 ANKS1BQ7Z6G8 1248 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 TTC7BQ86TV6 843 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 ACAP3Q96P50 834 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 C11orf70Q9BRQ4 267 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 STRA6Q9BX79 667 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 ELP3Q9H9T3 547 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 ZFYVE28Q9HCC9 887 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 CAB39Q9Y376 341 aaPredicted RBP10.78□□□□□ -0.68
MSRB3-201ENST00000308259 TAF1LQ8IZX4 1826 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 GOLGA8SH3BPF8 625 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 GOLGA8MH3BSY2 632 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 DHX15O43143 795 aaKnown RBP10.78□□□□□ -0.68
MSRB3-201ENST00000308259 EDF1O60869 148 aaKnown RBP10.78□□□□□ -0.68
MSRB3-201ENST00000308259 STAM2O75886 525 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 ZSCAN5DPP0CG00 497 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 RALAP11233 206 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 PABPC1P11940 636 aaKnown RBP10.78□□□□□ -0.68
MSRB3-201ENST00000308259 ZNF12P17014 697 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 PCSK6P29122 969 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 QARSP47897 775 aaKnown RBP10.78□□□□□ -0.68
MSRB3-201ENST00000308259 CLK3P49761 638 aaKnown RBP10.78□□□□□ -0.68
MSRB3-201ENST00000308259 AKR1D1P51857 326 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 ARPP19P56211 112 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 SLC25A3Q00325 362 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 STAT4Q14765 748 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 CLPPQ16740 277 aaPredicted RBP10.78□□□□□ -0.68
MSRB3-201ENST00000308259 ZNF362Q5T0B9 420 aaPredicted RBP10.78□□□□□ -0.68
MSRB3-201ENST00000308259 DEPDC1Q5TB30 811 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 PLEKHA8Q96JA3 519 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 TMEM206Q9H813 350 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 SMG5Q9UPR3 1016 aaKnown RBP10.78□□□□□ -0.68
MSRB3-201ENST00000308259 A0A1W2PQ67 120 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 H7C0C1 242 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 RPA3P35244 121 aaPredicted RBP10.78□□□□□ -0.68
MSRB3-201ENST00000308259 PTGS2P35354 604 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 ACADVLP49748 655 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 EIF2B5Q13144 721 aaKnown RBP10.78□□□□□ -0.68
MSRB3-201ENST00000308259 IRF5Q13568 498 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 ARL13BQ3SXY8 428 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 SV2AQ7L0J3 742 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 TTC39CQ8N584 583 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 NLGN2Q8NFZ4 835 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 ZNF304Q9HCX3 659 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 SCN9AQ15858 1988 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 FOCADQ5VW36 1801 aa10.78□□□□□ -0.68
MSRB3-201ENST00000308259 SIPA1L1O43166 1804 aa10.77□□□□□ -0.68
MSRB3-201ENST00000308259 GUCY1B2O75343 617 aa10.77□□□□□ -0.68
MSRB3-201ENST00000308259 ALDH1A1P00352 501 aa10.77□□□□□ -0.68
MSRB3-201ENST00000308259 ETS1P14921 441 aa10.77□□□□□ -0.68
MSRB3-201ENST00000308259 FDFT1P37268 417 aa10.77□□□□□ -0.68
MSRB3-201ENST00000308259 WNT7BP56706 349 aa10.77□□□□□ -0.68
MSRB3-201ENST00000308259 NRF1Q16656 503 aa10.77□□□□□ -0.68
MSRB3-201ENST00000308259 FAM117BQ6P1L5 589 aa10.77□□□□□ -0.68
MSRB3-201ENST00000308259 CYP4V2Q6ZWL3 525 aaPredicted RBP10.77□□□□□ -0.68
MSRB3-201ENST00000308259 NET1Q7Z628 596 aaPredicted RBP10.77□□□□□ -0.68
MSRB3-201ENST00000308259 PALM2Q8IXS6 379 aa10.77□□□□□ -0.68
MSRB3-201ENST00000308259 GLIS1Q8NBF1 620 aa10.77□□□□□ -0.68
MSRB3-201ENST00000308259 RBM15BQ8NDT2 890 aaKnown RBP10.77□□□□□ -0.68
MSRB3-201ENST00000308259 NCSTNQ92542 709 aa10.77□□□□□ -0.68
MSRB3-201ENST00000308259 NT5C1BQ96P26 610 aa10.77□□□□□ -0.68
MSRB3-201ENST00000308259 ARHGEF37A1IGU5 675 aa10.77□□□□□ -0.69
MSRB3-201ENST00000308259 HNRNPDLO14979 420 aaKnown RBP10.77□□□□□ -0.69
MSRB3-201ENST00000308259 UGT1A9O60656 530 aa10.77□□□□□ -0.69
MSRB3-201ENST00000308259 TOM1L1O75674 476 aa10.77□□□□□ -0.69
MSRB3-201ENST00000308259 TTC4O95801 387 aa10.77□□□□□ -0.69
MSRB3-201ENST00000308259 DLGAP3O95886 979 aa10.77□□□□□ -0.69
MSRB3-201ENST00000308259 TCF4P15884 667 aa10.77□□□□□ -0.69
MSRB3-201ENST00000308259 UGT1A6P19224 532 aa10.77□□□□□ -0.69
MSRB3-201ENST00000308259 UGT1A1P22309 533 aa10.77□□□□□ -0.69
MSRB3-201ENST00000308259 UGT1A4P22310 534 aa10.77□□□□□ -0.69
MSRB3-201ENST00000308259 UGT1A3P35503 534 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms