RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 F5P12259 2224 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 KANSL1LA0AUZ9 987 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 SLC12A8A0AV02 714 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 SHISA7A6NL88 538 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 LRRC53A6NM62 1247 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 FAM170BA6NMN3 283 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 ARNTLO00327 626 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 PAPSS1O43252 624 aaPredicted RBP11.77□□□□□ -0.53
SF3B6-201ENST00000233468 CYP1A1P04798 512 aaPredicted RBP11.77□□□□□ -0.53
SF3B6-201ENST00000233468 CALB1P05937 261 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 IRF1P10914 325 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 TNFAIP3P21580 790 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 GBP1P32455 592 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 CHKAP35790 457 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 PBX1P40424 430 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 MAGEA9P43362 315 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 GABRB2P47870 512 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 PGFP49763 221 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 CDK17Q00537 523 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 FMO1Q01740 532 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 SLC6A3Q01959 620 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 KLHL30Q0D2K2 578 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 NNTQ13423 1086 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 UBXN2BQ14CS0 331 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 EML3Q32P44 896 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 NAA35Q5VZE5 725 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 NUGGCQ68CJ6 796 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 MSANTD2Q6P1R3 559 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 SARM1Q6SZW1 724 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 TPRG1Q6ZUI0 275 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 SUMF1Q8NBK3 374 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 FAM3CQ92520 227 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 BAP1Q92560 729 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 NDRG1Q92597 394 aaKnown RBP11.77□□□□□ -0.53
SF3B6-201ENST00000233468 EDEM1Q92611 657 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 ZFYVE19Q96K21 471 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 ZFRQ96KR1 1074 aaKnown RBP11.77□□□□□ -0.53
SF3B6-201ENST00000233468 DDX50Q9BQ39 737 aaKnown RBP11.77□□□□□ -0.53
SF3B6-201ENST00000233468 HINFPQ9BQA5 517 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 DDX23Q9BUQ8 820 aaKnown RBP11.77□□□□□ -0.53
SF3B6-201ENST00000233468 TRIM5Q9C035 493 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 TTYH3Q9C0H2 523 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 SEMA4AQ9H3S1 761 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 EBF3Q9H4W6 596 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 ECT2Q9H8V3 914 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 HEBP1Q9NRV9 189 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 ZNHIT6Q9NWK9 470 aaKnown RBP11.77□□□□□ -0.53
SF3B6-201ENST00000233468 CYTH4Q9UIA0 394 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 NUDT5Q9UKK9 219 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 CAPN11Q9UMQ6 739 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 WNT6Q9Y6F9 365 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 SPTBN2O15020 2390 aa11.77□□□□□ -0.53
SF3B6-201ENST00000233468 LATS1O95835 1130 aa11.76□□□□□ -0.53
SF3B6-201ENST00000233468 SLC2A3P11169 496 aa11.76□□□□□ -0.53
SF3B6-201ENST00000233468 DESP17661 470 aa11.76□□□□□ -0.53
SF3B6-201ENST00000233468 PRKCIP41743 596 aa11.76□□□□□ -0.53
SF3B6-201ENST00000233468 NOMO3P69849 1222 aa11.76□□□□□ -0.53
SF3B6-201ENST00000233468 GAD2Q05329 585 aa11.76□□□□□ -0.53
SF3B6-201ENST00000233468 LRRC32Q14392 662 aa11.76□□□□□ -0.53
SF3B6-201ENST00000233468 PROX2Q3B8N5 592 aa11.76□□□□□ -0.53
SF3B6-201ENST00000233468 PTPN20Q4JDL3 420 aa11.76□□□□□ -0.53
SF3B6-201ENST00000233468 TSSK4Q6SA08 328 aa11.76□□□□□ -0.53
SF3B6-201ENST00000233468 NUDT18Q6ZVK8 323 aa11.76□□□□□ -0.53
SF3B6-201ENST00000233468 SLC26A9Q7LBE3 791 aa11.76□□□□□ -0.53
SF3B6-201ENST00000233468 BHLHA9Q7RTU4 235 aa11.76□□□□□ -0.53
SF3B6-201ENST00000233468 IRF2BP2Q7Z5L9 587 aa11.76□□□□□ -0.53
SF3B6-201ENST00000233468 ADGRG2Q8IZP9 1017 aa11.76□□□□□ -0.53
SF3B6-201ENST00000233468 SLC20A1Q8WUM9 679 aa11.76□□□□□ -0.53
SF3B6-201ENST00000233468 CPLX3Q8WVH0 158 aa11.76□□□□□ -0.53
SF3B6-201ENST00000233468 CPA5Q8WXQ8 436 aa11.76□□□□□ -0.53
SF3B6-201ENST00000233468 SPATA6Q9NWH7 488 aaPredicted RBP11.76□□□□□ -0.53
SF3B6-201ENST00000233468 GTSE1Q9NYZ3 720 aa11.76□□□□□ -0.53
SF3B6-201ENST00000233468 SLC12A6Q9UHW9 1150 aa11.76□□□□□ -0.53
SF3B6-201ENST00000233468 STAP1Q9ULZ2 295 aa11.76□□□□□ -0.53
SF3B6-201ENST00000233468 PAXBP1Q9Y5B6 917 aa11.76□□□□□ -0.53
SF3B6-201ENST00000233468 COL4A2P08572 1712 aa11.76□□□□□ -0.53
SF3B6-201ENST00000233468 NCOR2Q9Y618 2525 aa11.76□□□□□ -0.53
SF3B6-201ENST00000233468 ANKRD62A6NC57 917 aa11.75□□□□□ -0.53
SF3B6-201ENST00000233468 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.75□□□□□ -0.53
SF3B6-201ENST00000233468 SPECC1L-ADORA2AF8WAN1 911 aa11.75□□□□□ -0.53
SF3B6-201ENST00000233468 MDM4O15151 490 aa11.75□□□□□ -0.53
SF3B6-201ENST00000233468 STC2O76061 302 aa11.75□□□□□ -0.53
SF3B6-201ENST00000233468 ERBB2P04626 1255 aa11.75□□□□□ -0.53
SF3B6-201ENST00000233468 CYBBP04839 570 aa11.75□□□□□ -0.53
SF3B6-201ENST00000233468 SERPING1P05155 500 aa11.75□□□□□ -0.53
SF3B6-201ENST00000233468 UNGP13051 313 aaPredicted RBP11.75□□□□□ -0.53
SF3B6-201ENST00000233468 CHRNB2P17787 502 aa11.75□□□□□ -0.53
SF3B6-201ENST00000233468 MMP8P22894 467 aa11.75□□□□□ -0.53
SF3B6-201ENST00000233468 TARSP26639 723 aaKnown RBP11.75□□□□□ -0.53
SF3B6-201ENST00000233468 CORO1AP31146 461 aaKnown RBP11.75□□□□□ -0.53
SF3B6-201ENST00000233468 CTHP32929 405 aa11.75□□□□□ -0.53
SF3B6-201ENST00000233468 NOS2P35228 1153 aa11.75□□□□□ -0.53
SF3B6-201ENST00000233468 MLLT3P42568 568 aaPredicted RBP11.75□□□□□ -0.53
SF3B6-201ENST00000233468 SLC11A2P49281 568 aa11.75□□□□□ -0.53
SF3B6-201ENST00000233468 TBX4P57082 545 aa11.75□□□□□ -0.53
SF3B6-201ENST00000233468 ZXDBP98169 803 aa11.75□□□□□ -0.53
SF3B6-201ENST00000233468 CENPCQ03188 943 aa11.75□□□□□ -0.53
SF3B6-201ENST00000233468 CSTF1Q05048 431 aaKnown RBP11.75□□□□□ -0.53
SF3B6-201ENST00000233468 RING1Q06587 406 aa11.75□□□□□ -0.53
SF3B6-201ENST00000233468 TNK2Q07912 1038 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms