RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 RAB27AP51159 221 aa17.46■□□□□ 0.38
GAPDH-201ENST00000229239 ADIGQ0VDE8 80 aa17.46■□□□□ 0.38
GAPDH-201ENST00000229239 TPSAB1Q15661 275 aa17.46■□□□□ 0.38
GAPDH-201ENST00000229239 LRRC26Q2I0M4 334 aa17.46■□□□□ 0.38
GAPDH-201ENST00000229239 NBPF20Q3BBV1 942 aa17.46■□□□□ 0.38
GAPDH-201ENST00000229239 NUGGCQ68CJ6 796 aa17.46■□□□□ 0.38
GAPDH-201ENST00000229239 SIX6OS1Q8N1H7 587 aa17.46■□□□□ 0.38
GAPDH-201ENST00000229239 KCTD15Q96SI1 283 aaPredicted RBP17.46■□□□□ 0.38
GAPDH-201ENST00000229239 NPY6RQ99463 290 aa17.46■□□□□ 0.38
GAPDH-201ENST00000229239 RRN3Q9NYV6 651 aa17.46■□□□□ 0.38
GAPDH-201ENST00000229239 USP3Q9Y6I4 520 aa17.46■□□□□ 0.38
GAPDH-201ENST00000229239 IKBKGQ9Y6K9 419 aa17.46■□□□□ 0.38
GAPDH-201ENST00000229239 RANBP2P49792 3224 aaKnown RBP17.45■□□□□ 0.38
GAPDH-201ENST00000229239 MYADML2A6NDP7 307 aa17.45■□□□□ 0.38
GAPDH-201ENST00000229239 ELK3P41970 407 aa17.45■□□□□ 0.38
GAPDH-201ENST00000229239 ZNF135P52742 658 aaPredicted RBP17.45■□□□□ 0.38
GAPDH-201ENST00000229239 SARNPP82979 210 aaKnown RBP17.45■□□□□ 0.38
GAPDH-201ENST00000229239 CDK16Q00536 496 aa17.45■□□□□ 0.38
GAPDH-201ENST00000229239 MGAT3Q09327 533 aa17.45■□□□□ 0.38
GAPDH-201ENST00000229239 CAPN12Q6ZSI9 719 aa17.45■□□□□ 0.38
GAPDH-201ENST00000229239 CLEC20AQ6ZU45 233 aa17.45■□□□□ 0.38
GAPDH-201ENST00000229239 PAQR9Q6ZVX9 377 aa17.45■□□□□ 0.38
GAPDH-201ENST00000229239 C7orf61Q8IZ16 206 aa17.45■□□□□ 0.38
GAPDH-201ENST00000229239 VPS52Q8N1B4 723 aa17.45■□□□□ 0.38
GAPDH-201ENST00000229239 GSTCDQ8NEC7 633 aa17.45■□□□□ 0.38
GAPDH-201ENST00000229239 ZFP42Q96MM3 310 aa17.45■□□□□ 0.38
GAPDH-201ENST00000229239 DDX43Q9NXZ2 648 aaKnown RBP17.45■□□□□ 0.38
GAPDH-201ENST00000229239 CDH9Q9ULB4 789 aa17.45■□□□□ 0.38
GAPDH-201ENST00000229239 ARL2BPQ9Y2Y0 163 aa17.45■□□□□ 0.38
GAPDH-201ENST00000229239 H3BRJ5 948 aa17.44■□□□□ 0.38
GAPDH-201ENST00000229239 TM9SF1O15321 606 aa17.44■□□□□ 0.38
GAPDH-201ENST00000229239 TYROBPO43914 113 aa17.44■□□□□ 0.38
GAPDH-201ENST00000229239 ADAMTS4O75173 837 aa17.44■□□□□ 0.38
GAPDH-201ENST00000229239 BANF1O75531 89 aa17.44■□□□□ 0.38
GAPDH-201ENST00000229239 FAM155BO75949 473 aa17.44■□□□□ 0.38
GAPDH-201ENST00000229239 ATN1P54259 1190 aaPredicted RBP17.44■□□□□ 0.38
GAPDH-201ENST00000229239 LGSNQ5TDP6 509 aa17.44■□□□□ 0.38
GAPDH-201ENST00000229239 GDF6Q6KF10 455 aaPredicted RBP17.44■□□□□ 0.38
GAPDH-201ENST00000229239 CCDC185Q8N715 623 aa17.44■□□□□ 0.38
GAPDH-201ENST00000229239 DCAKDQ8WVC6 231 aa17.44■□□□□ 0.38
GAPDH-201ENST00000229239 FAM149B1Q96BN6 582 aa17.44■□□□□ 0.38
GAPDH-201ENST00000229239 MED10Q9BTT4 135 aa17.44■□□□□ 0.38
GAPDH-201ENST00000229239 ADAM33Q9BZ11 813 aa17.44■□□□□ 0.38
GAPDH-201ENST00000229239 POPDC2Q9HBU9 364 aa17.44■□□□□ 0.38
GAPDH-201ENST00000229239 XAB2Q9HCS7 855 aaKnown RBP17.44■□□□□ 0.38
GAPDH-201ENST00000229239 FGFR1OP2Q9NVK5 253 aa17.44■□□□□ 0.38
GAPDH-201ENST00000229239 CHMP2BQ9UQN3 213 aa17.44■□□□□ 0.38
GAPDH-201ENST00000229239 RAD54BQ9Y620 910 aa17.44■□□□□ 0.38
GAPDH-201ENST00000229239 CAPN7Q9Y6W3 813 aa17.44■□□□□ 0.38
GAPDH-201ENST00000229239 SCN10AQ9Y5Y9 1956 aa17.44■□□□□ 0.38
GAPDH-201ENST00000229239 TRIP12Q14669 1992 aaPredicted RBP17.44■□□□□ 0.38
GAPDH-201ENST00000229239 FOXO6A8MYZ6 492 aa17.44■□□□□ 0.38
GAPDH-201ENST00000229239 C9IYK1 514 aa17.44■□□□□ 0.38
GAPDH-201ENST00000229239 ZNF623O75123 536 aa17.44■□□□□ 0.38
GAPDH-201ENST00000229239 STK10O94804 968 aaKnown RBP17.44■□□□□ 0.38
GAPDH-201ENST00000229239 SLC34A2O95436 690 aa17.44■□□□□ 0.38
GAPDH-201ENST00000229239 MLH1P40692 756 aa17.44■□□□□ 0.38
GAPDH-201ENST00000229239 WDR4P57081 412 aaKnown RBP17.44■□□□□ 0.38
GAPDH-201ENST00000229239 NCBP2-AS2Q69YL0 99 aa17.44■□□□□ 0.38
GAPDH-201ENST00000229239 TRPM8Q7Z2W7 1104 aa17.44■□□□□ 0.38
GAPDH-201ENST00000229239 SPATA21Q7Z572 469 aa17.44■□□□□ 0.38
GAPDH-201ENST00000229239 GDAP1Q8TB36 358 aa17.44■□□□□ 0.38
GAPDH-201ENST00000229239 OLFM3Q96PB7 478 aa17.44■□□□□ 0.38
GAPDH-201ENST00000229239 SYT15Q9BQS2 421 aa17.44■□□□□ 0.38
GAPDH-201ENST00000229239 CNGB3Q9NQW8 809 aa17.44■□□□□ 0.38
GAPDH-201ENST00000229239 ATP2C2O75185 946 aa17.43■□□□□ 0.38
GAPDH-201ENST00000229239 DGKIO75912 1065 aa17.43■□□□□ 0.38
GAPDH-201ENST00000229239 CHRNA1P02708 482 aa17.43■□□□□ 0.38
GAPDH-201ENST00000229239 TAC1P20366 129 aa17.43■□□□□ 0.38
GAPDH-201ENST00000229239 CA4P22748 312 aa17.43■□□□□ 0.38
GAPDH-201ENST00000229239 PCSK1P29120 753 aa17.43■□□□□ 0.38
GAPDH-201ENST00000229239 FDFT1P37268 417 aa17.43■□□□□ 0.38
GAPDH-201ENST00000229239 GBE1Q04446 702 aa17.43■□□□□ 0.38
GAPDH-201ENST00000229239 PDK4Q16654 411 aa17.43■□□□□ 0.38
GAPDH-201ENST00000229239 DCAF6Q58WW2 860 aa17.43■□□□□ 0.38
GAPDH-201ENST00000229239 MDH1BQ5I0G3 518 aa17.43■□□□□ 0.38
GAPDH-201ENST00000229239 HEATR6Q6AI08 1181 aaKnown RBP17.43■□□□□ 0.38
GAPDH-201ENST00000229239 CXCL17Q6UXB2 119 aa17.43■□□□□ 0.38
GAPDH-201ENST00000229239 PDZD4Q76G19 769 aaPredicted RBP17.43■□□□□ 0.38
GAPDH-201ENST00000229239 TAB3Q8N5C8 712 aaPredicted RBP17.43■□□□□ 0.38
GAPDH-201ENST00000229239 MZB1Q8WU39 189 aa17.43■□□□□ 0.38
GAPDH-201ENST00000229239 TFB1MQ8WVM0 346 aaKnown RBP17.43■□□□□ 0.38
GAPDH-201ENST00000229239 SLC44A1Q8WWI5 657 aa17.43■□□□□ 0.38
GAPDH-201ENST00000229239 WNT8BQ93098 351 aa17.43■□□□□ 0.38
GAPDH-201ENST00000229239 NTAN1Q96AB6 310 aa17.43■□□□□ 0.38
GAPDH-201ENST00000229239 GAD1Q99259 594 aa17.43■□□□□ 0.38
GAPDH-201ENST00000229239 ETNK1Q9HBU6 452 aa17.43■□□□□ 0.38
GAPDH-201ENST00000229239 HAUS2Q9NVX0 235 aa17.43■□□□□ 0.38
GAPDH-201ENST00000229239 DTLQ9NZJ0 730 aa17.43■□□□□ 0.38
GAPDH-201ENST00000229239 ZNF180Q9UJW8 692 aa17.43■□□□□ 0.38
GAPDH-201ENST00000229239 PHF24Q9UPV7 400 aa17.43■□□□□ 0.38
GAPDH-201ENST00000229239 STARD13Q9Y3M8 1113 aa17.43■□□□□ 0.38
GAPDH-201ENST00000229239 TCRBV9S1A1TA0A576 114 aa17.42■□□□□ 0.38
GAPDH-201ENST00000229239 ARHGEF37A1IGU5 675 aa17.42■□□□□ 0.38
GAPDH-201ENST00000229239 MAGEA3P43357 314 aa17.42■□□□□ 0.38
GAPDH-201ENST00000229239 TKTL1P51854 596 aa17.42■□□□□ 0.38
GAPDH-201ENST00000229239 ATXN1P54253 815 aaKnown RBP17.42■□□□□ 0.38
GAPDH-201ENST00000229239 NRLP54845 237 aa17.42■□□□□ 0.38
GAPDH-201ENST00000229239 SEMA5AQ13591 1074 aa17.42■□□□□ 0.38
GAPDH-201ENST00000229239 SEPT7Q16181 437 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms