RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 LONP2Q86WA8 852 aa22.73■■□□□ 1.23
SMARCD2-201ENST00000225742 CCNJLQ8IV13 435 aa22.73■■□□□ 1.23
SMARCD2-201ENST00000225742 APPL2Q8NEU8 664 aa22.73■■□□□ 1.23
SMARCD2-201ENST00000225742 C7orf26Q96N11 449 aa22.73■■□□□ 1.23
SMARCD2-201ENST00000225742 DCTN4Q9UJW0 460 aa22.73■■□□□ 1.23
SMARCD2-201ENST00000225742 USP3Q9Y6I4 520 aa22.73■■□□□ 1.23
SMARCD2-201ENST00000225742 A0A0A0MRY4 1105 aa22.72■■□□□ 1.23
SMARCD2-201ENST00000225742 SMIM28A0A1B0GU29 152 aa22.72■■□□□ 1.23
SMARCD2-201ENST00000225742 E7ENQ6 273 aa22.72■■□□□ 1.23
SMARCD2-201ENST00000225742 I3L4J1 428 aa22.72■■□□□ 1.23
SMARCD2-201ENST00000225742 DAB1O75553 588 aa22.72■■□□□ 1.23
SMARCD2-201ENST00000225742 CYP2C9P11712 490 aa22.72■■□□□ 1.23
SMARCD2-201ENST00000225742 OVGP1Q12889 678 aa22.72■■□□□ 1.23
SMARCD2-201ENST00000225742 NAB1Q13506 487 aa22.72■■□□□ 1.23
SMARCD2-201ENST00000225742 SLC25A52Q3SY17 297 aa22.72■■□□□ 1.23
SMARCD2-201ENST00000225742 NCBP2-AS2Q69YL0 99 aa22.72■■□□□ 1.23
SMARCD2-201ENST00000225742 FBXO41Q8TF61 875 aa22.72■■□□□ 1.23
SMARCD2-201ENST00000225742 CLEC4CQ8WTT0 213 aa22.72■■□□□ 1.23
SMARCD2-201ENST00000225742 HTR3CQ8WXA8 447 aa22.72■■□□□ 1.23
SMARCD2-201ENST00000225742 SKA1Q96BD8 255 aa22.72■■□□□ 1.23
SMARCD2-201ENST00000225742 MS4A4AQ96JQ5 239 aa22.72■■□□□ 1.23
SMARCD2-201ENST00000225742 SPATA13Q96N96 652 aa22.72■■□□□ 1.23
SMARCD2-201ENST00000225742 DTLQ9NZJ0 730 aa22.72■■□□□ 1.23
SMARCD2-201ENST00000225742 HEY2Q9UBP5 337 aa22.72■■□□□ 1.23
SMARCD2-201ENST00000225742 FZD10Q9ULW2 581 aa22.72■■□□□ 1.23
SMARCD2-201ENST00000225742 BIRC5O15392 142 aa22.71■■□□□ 1.23
SMARCD2-201ENST00000225742 CCDC22O60826 627 aa22.71■■□□□ 1.23
SMARCD2-201ENST00000225742 F2P00734 622 aa22.71■■□□□ 1.23
SMARCD2-201ENST00000225742 PDGFRBP09619 1106 aa22.71■■□□□ 1.23
SMARCD2-201ENST00000225742 DLDP09622 509 aaKnown RBP22.71■■□□□ 1.23
SMARCD2-201ENST00000225742 WARSP23381 471 aaKnown RBP22.71■■□□□ 1.23
SMARCD2-201ENST00000225742 CRHR1P34998 444 aa22.71■■□□□ 1.23
SMARCD2-201ENST00000225742 SLC8A3P57103 927 aa22.71■■□□□ 1.23
SMARCD2-201ENST00000225742 STXBP5Q5T5C0 1151 aa22.71■■□□□ 1.23
SMARCD2-201ENST00000225742 ZNF449Q6P9G9 518 aa22.71■■□□□ 1.23
SMARCD2-201ENST00000225742 PLEKHH3Q7Z736 793 aa22.71■■□□□ 1.23
SMARCD2-201ENST00000225742 TOP6BLQ8N6T0 577 aa22.71■■□□□ 1.23
SMARCD2-201ENST00000225742 RSRC1Q96IZ7 334 aaKnown RBP22.71■■□□□ 1.23
SMARCD2-201ENST00000225742 MYCBPQ99417 103 aaPredicted RBP22.71■■□□□ 1.23
SMARCD2-201ENST00000225742 OSMRQ99650 979 aa22.71■■□□□ 1.23
SMARCD2-201ENST00000225742 TMEM120AQ9BXJ8 343 aa22.71■■□□□ 1.23
SMARCD2-201ENST00000225742 NXF3Q9H4D5 531 aaKnown RBP22.71■■□□□ 1.23
SMARCD2-201ENST00000225742 KCNK13Q9HB14 408 aa22.71■■□□□ 1.23
SMARCD2-201ENST00000225742 CDHR5Q9HBB8 845 aa22.71■■□□□ 1.23
SMARCD2-201ENST00000225742 SMYD2Q9NRG4 433 aa22.71■■□□□ 1.23
SMARCD2-201ENST00000225742 GINS2Q9Y248 185 aa22.71■■□□□ 1.23
SMARCD2-201ENST00000225742 L3MBTL1Q9Y468 752 aa22.71■■□□□ 1.23
SMARCD2-201ENST00000225742 CCL15-CCL14A0A0B4J2E2 113 aa22.71■■□□□ 1.23
SMARCD2-201ENST00000225742 A0A0G2JND7 137 aa22.71■■□□□ 1.23
SMARCD2-201ENST00000225742 ATP5BP06576 529 aaKnown RBP22.71■■□□□ 1.23
SMARCD2-201ENST00000225742 CCL15Q16663 113 aa22.71■■□□□ 1.23
SMARCD2-201ENST00000225742 GLRA4Q5JXX5 417 aa22.71■■□□□ 1.23
SMARCD2-201ENST00000225742 CCDC185Q8N715 623 aa22.71■■□□□ 1.23
SMARCD2-201ENST00000225742 NSL1Q96IY1 281 aa22.71■■□□□ 1.23
SMARCD2-201ENST00000225742 HNRNPABQ99729 332 aaKnown RBP22.71■■□□□ 1.23
SMARCD2-201ENST00000225742 ALG13Q9NP73 1137 aaKnown RBP22.71■■□□□ 1.23
SMARCD2-201ENST00000225742 KCNK4Q9NYG8 393 aa22.71■■□□□ 1.23
SMARCD2-201ENST00000225742 MOCS1Q9NZB8 636 aa22.71■■□□□ 1.23
SMARCD2-201ENST00000225742 HES2Q9Y543 173 aa22.71■■□□□ 1.23
SMARCD2-201ENST00000225742 MAD1L1Q9Y6D9 718 aa22.71■■□□□ 1.23
SMARCD2-201ENST00000225742 ZNF236Q9UL36 1845 aa22.7■■□□□ 1.22
SMARCD2-201ENST00000225742 H3BRJ5 948 aa22.7■■□□□ 1.22
SMARCD2-201ENST00000225742 HUS1O60921 280 aa22.7■■□□□ 1.22
SMARCD2-201ENST00000225742 ALDH1A2O94788 518 aa22.7■■□□□ 1.22
SMARCD2-201ENST00000225742 CBX6O95503 412 aa22.7■■□□□ 1.22
SMARCD2-201ENST00000225742 TMEM62Q0P6H9 643 aa22.7■■□□□ 1.22
SMARCD2-201ENST00000225742 NBPF20Q3BBV1 942 aa22.7■■□□□ 1.22
SMARCD2-201ENST00000225742 ANKRD20A2Q5SQ80 823 aa22.7■■□□□ 1.22
SMARCD2-201ENST00000225742 ANKRD20A1Q5TYW2 823 aa22.7■■□□□ 1.22
SMARCD2-201ENST00000225742 ANKRD20A3Q5VUR7 823 aa22.7■■□□□ 1.22
SMARCD2-201ENST00000225742 PAXIP1Q6ZW49 1069 aaPredicted RBP22.7■■□□□ 1.22
SMARCD2-201ENST00000225742 FAM13CQ8NE31 585 aa22.7■■□□□ 1.22
SMARCD2-201ENST00000225742 SLC2A14Q8TDB8 520 aa22.7■■□□□ 1.22
SMARCD2-201ENST00000225742 ACMSDQ8TDX5 336 aa22.7■■□□□ 1.22
SMARCD2-201ENST00000225742 LPIN3Q9BQK8 851 aa22.7■■□□□ 1.22
SMARCD2-201ENST00000225742 SIRPGQ9P1W8 387 aa22.7■■□□□ 1.22
SMARCD2-201ENST00000225742 OPHN1O60890 802 aa22.69■■□□□ 1.22
SMARCD2-201ENST00000225742 MAP3K6O95382 1288 aa22.69■■□□□ 1.22
SMARCD2-201ENST00000225742 LMNAP02545 664 aaKnown RBP22.69■■□□□ 1.22
SMARCD2-201ENST00000225742 CSH1P0DML2 217 aa22.69■■□□□ 1.22
SMARCD2-201ENST00000225742 CSH2P0DML3 217 aa22.69■■□□□ 1.22
SMARCD2-201ENST00000225742 AMPD1P23109 780 aa22.69■■□□□ 1.22
SMARCD2-201ENST00000225742 LMO2P25791 158 aa22.69■■□□□ 1.22
SMARCD2-201ENST00000225742 ELF1P32519 619 aa22.69■■□□□ 1.22
SMARCD2-201ENST00000225742 ZBTB16Q05516 673 aa22.69■■□□□ 1.22
SMARCD2-201ENST00000225742 LRRC8BQ6P9F7 803 aa22.69■■□□□ 1.22
SMARCD2-201ENST00000225742 MARK2Q7KZI7 788 aaKnown RBP22.69■■□□□ 1.22
SMARCD2-201ENST00000225742 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.69■■□□□ 1.22
SMARCD2-201ENST00000225742 KCTD13Q8WZ19 329 aa22.69■■□□□ 1.22
SMARCD2-201ENST00000225742 E2F7Q96AV8 911 aa22.69■■□□□ 1.22
SMARCD2-201ENST00000225742 PTCD3Q96EY7 689 aaKnown RBP22.69■■□□□ 1.22
SMARCD2-201ENST00000225742 NAT9Q9BTE0 207 aa22.69■■□□□ 1.22
SMARCD2-201ENST00000225742 DUSP16Q9BY84 665 aa22.69■■□□□ 1.22
SMARCD2-201ENST00000225742 SDR42E2A6NKP2 422 aa22.68■■□□□ 1.22
SMARCD2-201ENST00000225742 SPTLC1O15269 473 aa22.68■■□□□ 1.22
SMARCD2-201ENST00000225742 NOS2P35228 1153 aa22.68■■□□□ 1.22
SMARCD2-201ENST00000225742 GLUD2P49448 558 aa22.68■■□□□ 1.22
SMARCD2-201ENST00000225742 SULT1E1P49888 294 aa22.68■■□□□ 1.22
SMARCD2-201ENST00000225742 ATXN1P54253 815 aaKnown RBP22.68■■□□□ 1.22
SMARCD2-201ENST00000225742 ACCSLQ4AC99 568 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms