RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.18■□□□□ 0.183e-14■■■■■ 28.8
LAPTM4A-201ENST00000175091 TPX2Q9ULW0 747 aaKnown RBP16.18■□□□□ 0.18
LAPTM4A-201ENST00000175091 FARP1Q9Y4F1 1045 aaPredicted RBP16.18■□□□□ 0.18
LAPTM4A-201ENST00000175091 BCLAF3A2AJT9 711 aaKnown RBP16.18■□□□□ 0.18
LAPTM4A-201ENST00000175091 CFAP69A5D8W1 941 aa16.18■□□□□ 0.18
LAPTM4A-201ENST00000175091 KIAA0355O15063 1070 aa16.18■□□□□ 0.18
LAPTM4A-201ENST00000175091 IRAK2O43187 625 aa16.18■□□□□ 0.18
LAPTM4A-201ENST00000175091 VNN2O95498 520 aa16.18■□□□□ 0.18
LAPTM4A-201ENST00000175091 STIP1P31948 543 aaKnown RBP16.18■□□□□ 0.18
LAPTM4A-201ENST00000175091 ALDH7A1P49419 539 aaKnown RBP16.18■□□□□ 0.18
LAPTM4A-201ENST00000175091 SMARCB1Q12824 385 aa16.18■□□□□ 0.18
LAPTM4A-201ENST00000175091 DPYSQ14117 519 aa16.18■□□□□ 0.18
LAPTM4A-201ENST00000175091 TTMPQ5BVD1 217 aa16.18■□□□□ 0.18
LAPTM4A-201ENST00000175091 DARS2Q6PI48 645 aaKnown RBP16.18■□□□□ 0.18
LAPTM4A-201ENST00000175091 TAS1R1Q7RTX1 841 aa16.18■□□□□ 0.18
LAPTM4A-201ENST00000175091 SCD5Q86SK9 330 aa16.18■□□□□ 0.18
LAPTM4A-201ENST00000175091 CCDC25Q86WR0 208 aa16.18■□□□□ 0.18
LAPTM4A-201ENST00000175091 NUP93Q8N1F7 819 aa16.18■□□□□ 0.18
LAPTM4A-201ENST00000175091 ATAD1Q8NBU5 361 aa16.18■□□□□ 0.18
LAPTM4A-201ENST00000175091 STKLD1Q8NE28 680 aa16.18■□□□□ 0.18
LAPTM4A-201ENST00000175091 OR2W6PQ8NHA6 318 aa16.18■□□□□ 0.18
LAPTM4A-201ENST00000175091 ZNF689Q96CS4 500 aaPredicted RBP16.18■□□□□ 0.18
LAPTM4A-201ENST00000175091 OLFM3Q96PB7 478 aa16.18■□□□□ 0.18
LAPTM4A-201ENST00000175091 VN1R3Q9BXE9 311 aa16.18■□□□□ 0.18
LAPTM4A-201ENST00000175091 ETNK2Q9NVF9 386 aa16.18■□□□□ 0.18
LAPTM4A-201ENST00000175091 VPS18Q9P253 973 aa16.18■□□□□ 0.18
LAPTM4A-201ENST00000175091 SCML2Q9UQR0 700 aa16.18■□□□□ 0.18
LAPTM4A-201ENST00000175091 FAM92AA1XBS5 289 aa16.17■□□□□ 0.18
LAPTM4A-201ENST00000175091 TRIM43BA6NCK2 446 aa16.17■□□□□ 0.18
LAPTM4A-201ENST00000175091 H7C0C1 242 aa16.17■□□□□ 0.18
LAPTM4A-201ENST00000175091 RIPK2O43353 540 aa16.17■□□□□ 0.18
LAPTM4A-201ENST00000175091 MAP3K6O95382 1288 aa16.17■□□□□ 0.18
LAPTM4A-201ENST00000175091 AMPD1P23109 780 aa16.17■□□□□ 0.18
LAPTM4A-201ENST00000175091 RPL22P35268 128 aaKnown RBP16.17■□□□□ 0.18
LAPTM4A-201ENST00000175091 ATP5OP48047 213 aa16.17■□□□□ 0.18
LAPTM4A-201ENST00000175091 PGFP49763 221 aa16.17■□□□□ 0.18
LAPTM4A-201ENST00000175091 SLC10A2Q12908 348 aaPredicted RBP16.17■□□□□ 0.18
LAPTM4A-201ENST00000175091 XRCC4Q13426 336 aa16.17■□□□□ 0.18
LAPTM4A-201ENST00000175091 DDR2Q16832 855 aa16.17■□□□□ 0.18
LAPTM4A-201ENST00000175091 ARL13BQ3SXY8 428 aa16.17■□□□□ 0.18
LAPTM4A-201ENST00000175091 CEP85LQ5SZL2 805 aa16.17■□□□□ 0.18
LAPTM4A-201ENST00000175091 UBAP2Q5T6F2 1119 aaKnown RBP16.17■□□□□ 0.18
LAPTM4A-201ENST00000175091 SDHAF4Q5VUM1 108 aa16.17■□□□□ 0.18
LAPTM4A-201ENST00000175091 DENND2CQ68D51 928 aa16.17■□□□□ 0.18
LAPTM4A-201ENST00000175091 RFX8Q6ZV50 586 aa16.17■□□□□ 0.18
LAPTM4A-201ENST00000175091 TRMT10CQ7L0Y3 403 aaKnown RBP16.17■□□□□ 0.18
LAPTM4A-201ENST00000175091 RELL1Q8IUW5 271 aa16.17■□□□□ 0.18
LAPTM4A-201ENST00000175091 PRCCQ92733 491 aaPredicted RBP16.17■□□□□ 0.18
LAPTM4A-201ENST00000175091 ARL8AQ96BM9 186 aa16.17■□□□□ 0.18
LAPTM4A-201ENST00000175091 TRIM43Q96BQ3 446 aaPredicted RBP16.17■□□□□ 0.18
LAPTM4A-201ENST00000175091 IGSF21Q96ID5 467 aa16.17■□□□□ 0.18
LAPTM4A-201ENST00000175091 CRISPLD1Q9H336 500 aa16.17■□□□□ 0.18
LAPTM4A-201ENST00000175091 FBXO44Q9H4M3 255 aa16.17■□□□□ 0.18
LAPTM4A-201ENST00000175091 NMUR1Q9HB89 426 aa16.17■□□□□ 0.18
LAPTM4A-201ENST00000175091 USP29Q9HBJ7 922 aa16.17■□□□□ 0.18
LAPTM4A-201ENST00000175091 IL37Q9NZH6 218 aa16.17■□□□□ 0.18
LAPTM4A-201ENST00000175091 DTLQ9NZJ0 730 aa16.17■□□□□ 0.18
LAPTM4A-201ENST00000175091 MFHAS1Q9Y4C4 1052 aa16.17■□□□□ 0.18
LAPTM4A-201ENST00000175091 ALPK3Q96L96 1907 aa16.17■□□□□ 0.18
LAPTM4A-201ENST00000175091 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.16■□□□□ 0.18
LAPTM4A-201ENST00000175091 EEF2KO00418 725 aaKnown RBP16.16■□□□□ 0.18
LAPTM4A-201ENST00000175091 MFSD11O43934 449 aa16.16■□□□□ 0.18
LAPTM4A-201ENST00000175091 CSF2RAP15509 400 aa16.16■□□□□ 0.18
LAPTM4A-201ENST00000175091 CTCFP49711 727 aaPredicted RBP16.16■□□□□ 0.18
LAPTM4A-201ENST00000175091 LBX1P52954 281 aa16.16■□□□□ 0.18
LAPTM4A-201ENST00000175091 EIF3BP55884 814 aaKnown RBP16.16■□□□□ 0.18
LAPTM4A-201ENST00000175091 WDR5P61964 334 aaKnown RBP16.16■□□□□ 0.18
LAPTM4A-201ENST00000175091 DEFB103AP81534 67 aa16.16■□□□□ 0.18
LAPTM4A-201ENST00000175091 BTBD8Q5XKL5 378 aa16.16■□□□□ 0.18
LAPTM4A-201ENST00000175091 SLC8B1Q6J4K2 584 aa16.16■□□□□ 0.18
LAPTM4A-201ENST00000175091 PRSS55Q6UWB4 352 aaPredicted RBP16.16■□□□□ 0.18
LAPTM4A-201ENST00000175091 NECAB2Q7Z6G3 386 aa16.16■□□□□ 0.18
LAPTM4A-201ENST00000175091 PCGF5Q86SE9 256 aa16.16■□□□□ 0.18
LAPTM4A-201ENST00000175091 CDKL3Q8IVW4 592 aaPredicted RBP16.16■□□□□ 0.18
LAPTM4A-201ENST00000175091 C2orf15Q8WU43 125 aaKnown RBP16.16■□□□□ 0.18
LAPTM4A-201ENST00000175091 CPT1BQ92523 772 aa16.16■□□□□ 0.18
LAPTM4A-201ENST00000175091 PWWP2AQ96N64 755 aa16.16■□□□□ 0.18
LAPTM4A-201ENST00000175091 QKIQ96PU8 341 aaKnown RBP eCLIP16.16■□□□□ 0.18
LAPTM4A-201ENST00000175091 PRDM5Q9NQX1 630 aaPredicted RBP16.16■□□□□ 0.18
LAPTM4A-201ENST00000175091 MTRRQ9UBK8 725 aa16.16■□□□□ 0.18
LAPTM4A-201ENST00000175091 A0A1W2PQH9 124 aa16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 FAM72CH0Y354 149 aa16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 DCLK1O15075 740 aa16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 CREB3O43889 395 aa16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 RBL1P28749 1068 aa16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 ZNF135P52742 658 aaPredicted RBP16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 NRLP54845 237 aa16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 ARPP19P56211 112 aa16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 USP46P62068 366 aa16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 USP41Q3LFD5 358 aa16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 SLC45A4Q5BKX6 768 aa16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 FAM72AQ5TYM5 149 aa16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 FAM72DQ6L9T8 149 aa16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 RNF19BQ6ZMZ0 732 aa16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 CEP128Q6ZU80 1094 aa16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 DENND5BQ6ZUT9 1274 aa16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 B4GALNT4Q76KP1 1039 aa16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 HOOK3Q86VS8 718 aa16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 FAM72BQ86X60 149 aa16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 TKTL2Q9H0I9 626 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms