RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 AMPD1P23109 780 aa14.83□□□□□ -0.04
RTFDC1-201ENST00000023939 HPDP32754 393 aaPredicted RBP14.83□□□□□ -0.04
RTFDC1-201ENST00000023939 MMP13P45452 471 aa14.83□□□□□ -0.04
RTFDC1-201ENST00000023939 OR1G1P47890 313 aa14.83□□□□□ -0.04
RTFDC1-201ENST00000023939 CDR1P51861 262 aa14.83□□□□□ -0.04
RTFDC1-201ENST00000023939 RABGGTBP53611 331 aa14.83□□□□□ -0.04
RTFDC1-201ENST00000023939 NME3Q13232 169 aa14.83□□□□□ -0.04
RTFDC1-201ENST00000023939 MRPL58Q14197 206 aaKnown RBP14.83□□□□□ -0.04
RTFDC1-201ENST00000023939 PAFAH1B3Q15102 231 aaKnown RBP14.83□□□□□ -0.04
RTFDC1-201ENST00000023939 RASA2Q15283 850 aa14.83□□□□□ -0.04
RTFDC1-201ENST00000023939 NFE2Q16621 373 aaPredicted RBP14.83□□□□□ -0.04
RTFDC1-201ENST00000023939 BSPRYQ5W0U4 402 aa14.83□□□□□ -0.04
RTFDC1-201ENST00000023939 ANKRD33Q7Z3H0 272 aa14.83□□□□□ -0.04
RTFDC1-201ENST00000023939 TDRPQ86YL5 185 aa14.83□□□□□ -0.04
RTFDC1-201ENST00000023939 CASD1Q96PB1 797 aa14.83□□□□□ -0.04
RTFDC1-201ENST00000023939 COLEC11Q9BWP8 271 aa14.83□□□□□ -0.04
RTFDC1-201ENST00000023939 MAGEB5Q9BZ81 275 aa14.83□□□□□ -0.04
RTFDC1-201ENST00000023939 EURLQ9NYK6 297 aa14.83□□□□□ -0.04
RTFDC1-201ENST00000023939 FETUBQ9UGM5 382 aa14.83□□□□□ -0.04
RTFDC1-201ENST00000023939 RAD54BQ9Y620 910 aa14.83□□□□□ -0.04
RTFDC1-201ENST00000023939 E7EVH7 732 aa14.82□□□□□ -0.04
RTFDC1-201ENST00000023939 IGLV3-25P01717 112 aa14.82□□□□□ -0.04
RTFDC1-201ENST00000023939 CXCL10P02778 98 aa14.82□□□□□ -0.04
RTFDC1-201ENST00000023939 PDIA2Q13087 525 aaKnown RBP14.82□□□□□ -0.04
RTFDC1-201ENST00000023939 EIF4EBP2Q13542 120 aaPredicted RBP14.82□□□□□ -0.04
RTFDC1-201ENST00000023939 ARL13BQ3SXY8 428 aa14.82□□□□□ -0.04
RTFDC1-201ENST00000023939 VSTM1Q6UX27 236 aa14.82□□□□□ -0.04
RTFDC1-201ENST00000023939 LRRC31Q6UY01 552 aa14.82□□□□□ -0.04
RTFDC1-201ENST00000023939 ABI1Q8IZP0 508 aa14.82□□□□□ -0.04
RTFDC1-201ENST00000023939 PDIK1LQ8N165 341 aa14.82□□□□□ -0.04
RTFDC1-201ENST00000023939 CENPTQ96BT3 561 aa14.82□□□□□ -0.04
RTFDC1-201ENST00000023939 DDIT4Q9NX09 232 aa14.82□□□□□ -0.04
RTFDC1-201ENST00000023939 DNAJB4Q9UDY4 337 aa14.82□□□□□ -0.04
RTFDC1-201ENST00000023939 XPO7Q9UIA9 1087 aaKnown RBP14.82□□□□□ -0.04
RTFDC1-201ENST00000023939 OR6C75A6NL08 312 aa14.81□□□□□ -0.04
RTFDC1-201ENST00000023939 DCLK1O15075 740 aa14.81□□□□□ -0.04
RTFDC1-201ENST00000023939 CDH16O75309 829 aa14.81□□□□□ -0.04
RTFDC1-201ENST00000023939 TADA2AO75478 443 aa14.81□□□□□ -0.04
RTFDC1-201ENST00000023939 CYP2C18P33260 490 aa14.81□□□□□ -0.04
RTFDC1-201ENST00000023939 MAGEA11P43364 429 aa14.81□□□□□ -0.04
RTFDC1-201ENST00000023939 IFI35P80217 286 aaPredicted RBP14.81□□□□□ -0.04
RTFDC1-201ENST00000023939 BASP1P80723 227 aaKnown RBP14.81□□□□□ -0.04
RTFDC1-201ENST00000023939 LONRF1Q17RB8 773 aa14.81□□□□□ -0.04
RTFDC1-201ENST00000023939 KCNT2Q6UVM3 1135 aa14.81□□□□□ -0.04
RTFDC1-201ENST00000023939 RFX8Q6ZV50 586 aa14.81□□□□□ -0.04
RTFDC1-201ENST00000023939 TAOK1Q7L7X3 1001 aa14.81□□□□□ -0.04
RTFDC1-201ENST00000023939 ZBED8Q8IZ13 594 aa14.81□□□□□ -0.04
RTFDC1-201ENST00000023939 MCUQ8NE86 351 aa14.81□□□□□ -0.04
RTFDC1-201ENST00000023939 C8orf48Q96LL4 319 aa14.81□□□□□ -0.04
RTFDC1-201ENST00000023939 DEFB118Q96PH6 123 aa14.81□□□□□ -0.04
RTFDC1-201ENST00000023939 TMEM175Q9BSA9 504 aa14.81□□□□□ -0.04
RTFDC1-201ENST00000023939 KLC2Q9H0B6 622 aa14.81□□□□□ -0.04
RTFDC1-201ENST00000023939 ETNK2Q9NVF9 386 aa14.81□□□□□ -0.04
RTFDC1-201ENST00000023939 ADAM28Q9UKQ2 775 aa14.81□□□□□ -0.04
RTFDC1-201ENST00000023939 TCRBV7S3A2A0A539 114 aa14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 EEF2KO00418 725 aaKnown RBP14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 FGFR3P22607 806 aa14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 LSP1P33241 339 aa14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 SLCO1A2P46721 670 aa14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 SLC5A3P53794 718 aa14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 GUCY1A3Q02108 690 aa14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 FASTKD3Q14CZ7 662 aaKnown RBP14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 PDK1Q15118 436 aa14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 PRKD1Q15139 912 aaPredicted RBP14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 VARS2Q5ST30 1063 aaKnown RBP14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 FNBP1LQ5T0N5 605 aa14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 PDZD4Q76G19 769 aaPredicted RBP14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 NPAS4Q8IUM7 802 aa14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 ATP11CQ8NB49 1132 aa14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 DQX1Q8TE96 717 aaKnown RBP14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 TFB1MQ8WVM0 346 aaKnown RBP14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 MRPL9Q9BYD2 267 aaKnown RBP14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 RAB6BQ9NRW1 208 aa14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 ABCC13Q9NSE7 274 aa14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 PRG3Q9Y2Y8 225 aaPredicted RBP14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 SMIM23A6NLE4 172 aa14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 I6L893 689 aaPredicted RBP14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 ALDH2P05091 517 aa14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 CCL5P13501 91 aa14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 GRIK1P39086 918 aa14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 GLUD2P49448 558 aa14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 NRLP54845 237 aa14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 HTRA3P83110 453 aa14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 GAD2Q05329 585 aa14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 ELAVL2Q12926 359 aaKnown RBP14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 MSS51Q4VC12 460 aa14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 SLC39A12Q504Y0 691 aa14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 TAC4Q86UU9 113 aa14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 CCDC13Q8IYE1 715 aa14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 PYROXD1Q8WU10 500 aa14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 EDEM1Q92611 657 aa14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 TOX2Q96NM4 488 aa14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 OXCT2Q9BYC2 517 aaPredicted RBP14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 OSBPL2Q9H1P3 480 aa14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 WDCPQ9H6R7 721 aa14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 ANLNQ9NQW6 1124 aa14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 TMPRSS4Q9NRS4 437 aa14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 LRFN2Q9ULH4 789 aa14.8□□□□□ -0.04
RTFDC1-201ENST00000023939 ACTL7BQ9Y614 415 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms