RNA–Protein interactions for RNA: ENST00000626660.1

SQSTM1-216, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-216ENST00000626660 ZXDBP98169 803 aa19.94■□□□□ 0.78
SQSTM1-216ENST00000626660 PFKPQ01813 784 aa19.94■□□□□ 0.78
SQSTM1-216ENST00000626660 CCDC122Q5T0U0 273 aa19.94■□□□□ 0.78
SQSTM1-216ENST00000626660 SYPL2Q5VXT5 272 aa19.94■□□□□ 0.78
SQSTM1-216ENST00000626660 ALKBH5Q6P6C2 394 aaKnown RBP19.94■□□□□ 0.78
SQSTM1-216ENST00000626660 C3orf20Q8ND61 904 aa19.94■□□□□ 0.78
SQSTM1-216ENST00000626660 IRF7Q92985 503 aa19.94■□□□□ 0.78
SQSTM1-216ENST00000626660 PLD4Q96BZ4 506 aa19.94■□□□□ 0.78
SQSTM1-216ENST00000626660 CHP1Q99653 195 aa19.94■□□□□ 0.78
SQSTM1-216ENST00000626660 DCLK3Q9C098 648 aa19.94■□□□□ 0.78
SQSTM1-216ENST00000626660 ISCUQ9H1K1 167 aa19.94■□□□□ 0.78
SQSTM1-216ENST00000626660 NHEJ1Q9H9Q4 299 aaPredicted RBP19.94■□□□□ 0.78
SQSTM1-216ENST00000626660 METTL5Q9NRN9 209 aaKnown RBP19.94■□□□□ 0.78
SQSTM1-216ENST00000626660 TBC1D14Q9P2M4 693 aa19.94■□□□□ 0.78
SQSTM1-216ENST00000626660 SFMBT1Q9UHJ3 866 aa19.94■□□□□ 0.78
SQSTM1-216ENST00000626660 STAP1Q9ULZ2 295 aa19.94■□□□□ 0.78
SQSTM1-216ENST00000626660 NARSO43776 548 aaKnown RBP19.93■□□□□ 0.78
SQSTM1-216ENST00000626660 HMBSP08397 361 aa19.93■□□□□ 0.78
SQSTM1-216ENST00000626660 KRT3P12035 628 aa19.93■□□□□ 0.78
SQSTM1-216ENST00000626660 GBP1P32455 592 aa19.93■□□□□ 0.78
SQSTM1-216ENST00000626660 GPC5P78333 572 aa19.93■□□□□ 0.78
SQSTM1-216ENST00000626660 PDGFRLQ15198 375 aa19.93■□□□□ 0.78
SQSTM1-216ENST00000626660 TRIP4Q15650 581 aaPredicted RBP19.93■□□□□ 0.78
SQSTM1-216ENST00000626660 SLC18A3Q16572 532 aa19.93■□□□□ 0.78
SQSTM1-216ENST00000626660 ARCQ7LC44 396 aa19.93■□□□□ 0.78
SQSTM1-216ENST00000626660 RIN3Q8TB24 985 aa19.93■□□□□ 0.78
SQSTM1-216ENST00000626660 KHSRPQ92945 711 aaKnown RBP eCLIP19.93■□□□□ 0.78
SQSTM1-216ENST00000626660 ZNF653Q96CK0 615 aa19.93■□□□□ 0.78
SQSTM1-216ENST00000626660 LRFN3Q9BTN0 628 aa19.93■□□□□ 0.78
SQSTM1-216ENST00000626660 EPHX3Q9H6B9 360 aa19.93■□□□□ 0.78
SQSTM1-216ENST00000626660 FAM204AQ9H8W3 233 aa19.93■□□□□ 0.78
SQSTM1-216ENST00000626660 SLC2A4RGQ9NR83 387 aa19.93■□□□□ 0.78
SQSTM1-216ENST00000626660 DUS2Q9NX74 493 aaKnown RBP19.93■□□□□ 0.78
SQSTM1-216ENST00000626660 MSI1O43347 362 aaKnown RBP19.92■□□□□ 0.78
SQSTM1-216ENST00000626660 DCXO43602 365 aa19.92■□□□□ 0.78
SQSTM1-216ENST00000626660 STC2O76061 302 aa19.92■□□□□ 0.78
SQSTM1-216ENST00000626660 TRUB2O95900 331 aaKnown RBP19.92■□□□□ 0.78
SQSTM1-216ENST00000626660 RRM1P23921 792 aa19.92■□□□□ 0.78
SQSTM1-216ENST00000626660 HARS2P49590 506 aaKnown RBP19.92■□□□□ 0.78
SQSTM1-216ENST00000626660 TBX4P57082 545 aa19.92■□□□□ 0.78
SQSTM1-216ENST00000626660 GFPT1Q06210 699 aaPredicted RBP19.92■□□□□ 0.78
SQSTM1-216ENST00000626660 NNTQ13423 1086 aa19.92■□□□□ 0.78
SQSTM1-216ENST00000626660 HTR3DQ70Z44 454 aa19.92■□□□□ 0.78
SQSTM1-216ENST00000626660 TAC4Q86UU9 113 aa19.92■□□□□ 0.78
SQSTM1-216ENST00000626660 CSGALNACT1Q8TDX6 532 aa19.92■□□□□ 0.78
SQSTM1-216ENST00000626660 OSCP1Q8WVF1 389 aa19.92■□□□□ 0.78
SQSTM1-216ENST00000626660 ANP32BQ92688 251 aaKnown RBP19.92■□□□□ 0.78
SQSTM1-216ENST00000626660 DNASE1L2Q92874 299 aa19.92■□□□□ 0.78
SQSTM1-216ENST00000626660 ZFYVE19Q96K21 471 aa19.92■□□□□ 0.78
SQSTM1-216ENST00000626660 DDX23Q9BUQ8 820 aaKnown RBP19.92■□□□□ 0.78
SQSTM1-216ENST00000626660 PARVAQ9NVD7 372 aa19.92■□□□□ 0.78
SQSTM1-216ENST00000626660 CNOT8Q9UFF9 292 aaKnown RBP19.92■□□□□ 0.78
SQSTM1-216ENST00000626660 TMEM59LQ9UK28 342 aa19.92■□□□□ 0.78
SQSTM1-216ENST00000626660 ZNF510Q9Y2H8 683 aa19.92■□□□□ 0.78
SQSTM1-216ENST00000626660 ARIH1Q9Y4X5 557 aaPredicted RBP19.92■□□□□ 0.78
SQSTM1-216ENST00000626660 WNT6Q9Y6F9 365 aa19.92■□□□□ 0.78
SQSTM1-216ENST00000626660 SIGLEC16A6NMB1 481 aa19.91■□□□□ 0.78
SQSTM1-216ENST00000626660 ALADP13716 330 aa19.91■□□□□ 0.78
SQSTM1-216ENST00000626660 FLT3P36888 993 aa19.91■□□□□ 0.78
SQSTM1-216ENST00000626660 SULT1E1P49888 294 aa19.91■□□□□ 0.78
SQSTM1-216ENST00000626660 GSDMDP57764 484 aa19.91■□□□□ 0.78
SQSTM1-216ENST00000626660 RING1Q06587 406 aa19.91■□□□□ 0.78
SQSTM1-216ENST00000626660 ASTE1Q2TB18 679 aaPredicted RBP19.91■□□□□ 0.78
SQSTM1-216ENST00000626660 NUGGCQ68CJ6 796 aa19.91■□□□□ 0.78
SQSTM1-216ENST00000626660 DCUN1D2Q6PH85 259 aa19.91■□□□□ 0.78
SQSTM1-216ENST00000626660 UNC45BQ8IWX7 931 aa19.91■□□□□ 0.78
SQSTM1-216ENST00000626660 ADAM32Q8TC27 787 aa19.91■□□□□ 0.78
SQSTM1-216ENST00000626660 ATP2A3Q93084 1043 aa19.91■□□□□ 0.78
SQSTM1-216ENST00000626660 OTUB2Q96DC9 234 aa19.91■□□□□ 0.78
SQSTM1-216ENST00000626660 TMEM51Q9NW97 253 aa19.91■□□□□ 0.78
SQSTM1-216ENST00000626660 DDIT4Q9NX09 232 aa19.91■□□□□ 0.78
SQSTM1-216ENST00000626660 FBXL21Q9UKT6 434 aa19.91■□□□□ 0.78
SQSTM1-216ENST00000626660 TLR6Q9Y2C9 796 aa19.91■□□□□ 0.78
SQSTM1-216ENST00000626660 SCINQ9Y6U3 715 aa19.91■□□□□ 0.78
SQSTM1-216ENST00000626660 TICRRQ7Z2Z1 1910 aa19.9■□□□□ 0.78
SQSTM1-216ENST00000626660 SCAMP3O14828 347 aaKnown RBP19.9■□□□□ 0.78
SQSTM1-216ENST00000626660 IRAK2O43187 625 aa19.9■□□□□ 0.78
SQSTM1-216ENST00000626660 PDGFRAP16234 1089 aa19.9■□□□□ 0.78
SQSTM1-216ENST00000626660 DESP17661 470 aa19.9■□□□□ 0.78
SQSTM1-216ENST00000626660 ABCB4P21439 1286 aa19.9■□□□□ 0.78
SQSTM1-216ENST00000626660 CORO1AP31146 461 aaKnown RBP19.9■□□□□ 0.78
SQSTM1-216ENST00000626660 CYLC1P35663 651 aaPredicted RBP19.9■□□□□ 0.78
SQSTM1-216ENST00000626660 ZXDAP98168 799 aa19.9■□□□□ 0.78
SQSTM1-216ENST00000626660 SLC25A52Q3SY17 297 aa19.9■□□□□ 0.78
SQSTM1-216ENST00000626660 DNAAF5Q86Y56 855 aa19.9■□□□□ 0.78
SQSTM1-216ENST00000626660 TMTC1Q8IUR5 882 aa19.9■□□□□ 0.78
SQSTM1-216ENST00000626660 CCDC170Q8IYT3 715 aa19.9■□□□□ 0.78
SQSTM1-216ENST00000626660 EMC1Q8N766 993 aa19.9■□□□□ 0.78
SQSTM1-216ENST00000626660 RNF34Q969K3 372 aa19.9■□□□□ 0.78
SQSTM1-216ENST00000626660 WBP2Q969T9 261 aa19.9■□□□□ 0.78
SQSTM1-216ENST00000626660 ASIC4Q96FT7 647 aa19.9■□□□□ 0.78
SQSTM1-216ENST00000626660 FAM83CQ9BQN1 747 aa19.9■□□□□ 0.78
SQSTM1-216ENST00000626660 TRPV5Q9NQA5 729 aa19.9■□□□□ 0.78
SQSTM1-216ENST00000626660 SYNJ2BP-COX16A0A087WUM0 186 aa19.89■□□□□ 0.77
SQSTM1-216ENST00000626660 M0QYT0 321 aa19.89■□□□□ 0.77
SQSTM1-216ENST00000626660 ATMINO43313 823 aaPredicted RBP19.89■□□□□ 0.77
SQSTM1-216ENST00000626660 GJB6O95452 261 aa19.89■□□□□ 0.77
SQSTM1-216ENST00000626660 NFATC1O95644 943 aa19.89■□□□□ 0.77
SQSTM1-216ENST00000626660 F9P00740 461 aa19.89■□□□□ 0.77
SQSTM1-216ENST00000626660 APOEP02649 317 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms