RNA–Protein interactions for RNA: ENST00000606426.1

CUX2P1-201, Transcript of cut like homeobox 2 pseudogene 1, humanhuman

BASIC

Gene CUX2P1, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2P1-201ENST00000606426 CCR1P32246 355 aa7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 CHKAP35790 457 aa7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 IFNAR2P48551 515 aa7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 SLC11A2P49281 568 aa7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 PGFP49763 221 aa7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 MLLT6P55198 1093 aaPredicted RBP7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 TBX4P57082 545 aa7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 RNASE9P60153 205 aaKnown RBP7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 GPC5P78333 572 aa7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 GFPT1Q06210 699 aaPredicted RBP7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 SPA17Q15506 151 aa7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 TRIP4Q15650 581 aaPredicted RBP7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 ASTE1Q2TB18 679 aaPredicted RBP7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 SLC25A52Q3SY17 297 aa7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 PLEKHA7Q6IQ23 1121 aa7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 HFE2Q6ZVN8 426 aa7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 HTR3DQ70Z44 454 aa7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 H2AFVQ71UI9 128 aa7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 SPC24Q8NBT2 197 aa7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 CCDC112Q8NEF3 446 aa7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 CSGALNACT1Q8TDX6 532 aa7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 DQX1Q8TE96 717 aaKnown RBP7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 FNIP1Q8TF40 1166 aa7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 OSCP1Q8WVF1 389 aa7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 CTNNBL1Q8WYA6 563 aaPredicted RBP7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 AZIN2Q96A70 460 aa7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 ZNF653Q96CK0 615 aa7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 PGAP3Q96FM1 320 aaPredicted RBP7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 ZFRQ96KR1 1074 aaKnown RBP7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 BAG1Q99933 345 aaPredicted RBP7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 DDX23Q9BUQ8 820 aaKnown RBP7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 SMG9Q9H0W8 520 aaKnown RBP7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 BRD9Q9H8M2 597 aa7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 FAM204AQ9H8W3 233 aa7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 METTL5Q9NRN9 209 aaKnown RBP7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 DUS2Q9NX74 493 aaKnown RBP7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 SMPD4Q9NXE4 827 aa7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 TAS2R14Q9NYV8 317 aa7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 CFAP97Q9P2B7 532 aa7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 WNT16Q9UBV4 365 aa7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 TJP2Q9UDY2 1190 aa7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 CNOT8Q9UFF9 292 aaKnown RBP7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 SFMBT1Q9UHJ3 866 aa7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 TMEM59LQ9UK28 342 aa7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 INTUQ9ULD6 942 aa7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 NAALADL1Q9UQQ1 740 aa7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 CCL26Q9Y258 94 aa7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 NOTCH4Q99466 2003 aa7.81□□□□□ -1.16
CUX2P1-201ENST00000606426 MYH10P35580 1976 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 GREB1Q4ZG55 1949 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 TCRBV5S1A1TA0A578 114 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 C2CD4BA6NLJ0 364 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 EIF3CLB5ME19 914 aaKnown RBP7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 M0QYT0 321 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 MDM4O15151 490 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 IRAK2O43187 625 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 DCXO43602 365 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 GRAP2O75791 330 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 STC2O76061 302 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 LCA5LO95447 670 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 ADH1CP00326 375 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 IGLV3-25P01717 112 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 CYBBP04839 570 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 ASGR2P07307 311 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 TMEM253P0C7T8 217 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 PDGFRAP16234 1089 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 ABCB4P21439 1286 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 GPD1P21695 349 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 CORO1AP31146 461 aaKnown RBP7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 RDXP35241 583 aaKnown RBP7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 PTPN9P43378 593 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 SULT1E1P49888 294 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 ZNF143P52747 638 aaPredicted RBP7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 KRT83P78385 493 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 DEUP1Q05D60 604 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 MAMLD1Q13495 774 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 GRM2Q14416 872 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 PPP2R5DQ14738 602 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 ACAP1Q15027 740 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 TAF5Q15542 800 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 ARL13BQ3SXY8 428 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 PREPLQ4J6C6 727 aaPredicted RBP7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 C2CD6Q53TS8 623 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 BRMS1LQ5PSV4 323 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 PPP1R15BQ5SWA1 713 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 POTEHQ6S545 545 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 STRADAQ7RTN6 431 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 TAC4Q86UU9 113 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 CPA6Q8N4T0 437 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 ATP6V0D2Q8N8Y2 350 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 OLIG1Q8TAK6 271 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 RSAD2Q8WXG1 361 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 KHSRPQ92945 711 aaKnown RBP eCLIP7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 RNF34Q969K3 372 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 NT5C3BQ969T7 300 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 SHDQ96IW2 340 aa7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 PIWIL1Q96J94 861 aaKnown RBP7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 CALR3Q96L12 384 aaKnown RBP7.8□□□□□ -1.16
CUX2P1-201ENST00000606426 NPY6RQ99463 290 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms