RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 KRT35Q92764 455 aa12.04□□□□□ -0.48
ZNF548-211ENST00000600927 BTBD6Q96KE9 485 aa12.04□□□□□ -0.48
ZNF548-211ENST00000600927 MCEEQ96PE7 176 aa12.04□□□□□ -0.48
ZNF548-211ENST00000600927 SYT15Q9BQS2 421 aa12.04□□□□□ -0.48
ZNF548-211ENST00000600927 SMOC2Q9H3U7 446 aa12.04□□□□□ -0.48
ZNF548-211ENST00000600927 RBM12Q9NTZ6 932 aaKnown RBP12.04□□□□□ -0.48
ZNF548-211ENST00000600927 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.04□□□□□ -0.48
ZNF548-211ENST00000600927 CHORDC1Q9UHD1 332 aaPredicted RBP12.04□□□□□ -0.48
ZNF548-211ENST00000600927 DUSP12Q9UNI6 340 aa12.04□□□□□ -0.48
ZNF548-211ENST00000600927 V9GYY5 206 aaPredicted RBP12.04□□□□□ -0.48
ZNF548-211ENST00000600927 DOCK6Q96HP0 2047 aa12.04□□□□□ -0.48
ZNF548-211ENST00000600927 FAM187AA6NFU0 413 aa12.03□□□□□ -0.48
ZNF548-211ENST00000600927 C2CD4BA6NLJ0 364 aa12.03□□□□□ -0.48
ZNF548-211ENST00000600927 BHMG1C9JSJ3 638 aaPredicted RBP12.03□□□□□ -0.48
ZNF548-211ENST00000600927 E5RJQ4 531 aa12.03□□□□□ -0.48
ZNF548-211ENST00000600927 HCRTO43612 131 aa12.03□□□□□ -0.48
ZNF548-211ENST00000600927 HAPLN1P10915 354 aaPredicted RBP12.03□□□□□ -0.48
ZNF548-211ENST00000600927 NPR3P17342 541 aa12.03□□□□□ -0.48
ZNF548-211ENST00000600927 CEBPBP17676 345 aa12.03□□□□□ -0.48
ZNF548-211ENST00000600927 PSMA2P25787 234 aa12.03□□□□□ -0.48
ZNF548-211ENST00000600927 PTPN9P43378 593 aa12.03□□□□□ -0.48
ZNF548-211ENST00000600927 DRG2P55039 364 aaKnown RBP12.03□□□□□ -0.48
ZNF548-211ENST00000600927 TSPY1Q01534 308 aa12.03□□□□□ -0.48
ZNF548-211ENST00000600927 C2orf54Q08AI8 447 aa12.03□□□□□ -0.48
ZNF548-211ENST00000600927 ORC1Q13415 861 aa12.03□□□□□ -0.48
ZNF548-211ENST00000600927 TDGQ13569 410 aa12.03□□□□□ -0.48
ZNF548-211ENST00000600927 DHX34Q14147 1143 aaKnown RBP12.03□□□□□ -0.48
ZNF548-211ENST00000600927 CCDC142Q17RM4 750 aa12.03□□□□□ -0.48
ZNF548-211ENST00000600927 BOLA3Q53S33 107 aa12.03□□□□□ -0.48
ZNF548-211ENST00000600927 C2CD6Q53TS8 623 aa12.03□□□□□ -0.48
ZNF548-211ENST00000600927 OR6B2Q6IFH4 312 aa12.03□□□□□ -0.48
ZNF548-211ENST00000600927 C8orf74Q6P047 294 aa12.03□□□□□ -0.48
ZNF548-211ENST00000600927 TMCO3Q6UWJ1 677 aa12.03□□□□□ -0.48
ZNF548-211ENST00000600927 OLFML1Q6UWY5 402 aa12.03□□□□□ -0.48
ZNF548-211ENST00000600927 IFT20Q8IY31 132 aa12.03□□□□□ -0.48
ZNF548-211ENST00000600927 DCP1BQ8IZD4 617 aaKnown RBP12.03□□□□□ -0.48
ZNF548-211ENST00000600927 FUKQ8N0W3 1084 aa12.03□□□□□ -0.48
ZNF548-211ENST00000600927 C12orf50Q8NA57 414 aaPredicted RBP12.03□□□□□ -0.48
ZNF548-211ENST00000600927 SLC2A14Q8TDB8 520 aa12.03□□□□□ -0.48
ZNF548-211ENST00000600927 TSC1Q92574 1164 aa12.03□□□□□ -0.48
ZNF548-211ENST00000600927 FGF14Q92915 247 aa12.03□□□□□ -0.48
ZNF548-211ENST00000600927 PSMG2Q969U7 264 aa12.03□□□□□ -0.48
ZNF548-211ENST00000600927 FRMD8P1Q9BZ68 369 aaPredicted RBP12.03□□□□□ -0.48
ZNF548-211ENST00000600927 DPEP3Q9H4B8 488 aa12.03□□□□□ -0.48
ZNF548-211ENST00000600927 LRRC19Q9H756 370 aa12.03□□□□□ -0.48
ZNF548-211ENST00000600927 CSNK1G1Q9HCP0 422 aa12.03□□□□□ -0.48
ZNF548-211ENST00000600927 ARFGAP3Q9NP61 516 aa12.03□□□□□ -0.48
ZNF548-211ENST00000600927 ST7Q9NRC1 585 aa12.03□□□□□ -0.48
ZNF548-211ENST00000600927 FAM49BQ9NUQ9 324 aa12.03□□□□□ -0.48
ZNF548-211ENST00000600927 GDE1Q9NZC3 331 aa12.03□□□□□ -0.48
ZNF548-211ENST00000600927 STIM2Q9P246 746 aa12.03□□□□□ -0.48
ZNF548-211ENST00000600927 PCYOX1Q9UHG3 505 aa12.03□□□□□ -0.48
ZNF548-211ENST00000600927 ASB3Q9Y575 518 aa12.03□□□□□ -0.48
ZNF548-211ENST00000600927 TMEM221A6NGB7 291 aa12.02□□□□□ -0.49
ZNF548-211ENST00000600927 ZNF487B1APH4 448 aa12.02□□□□□ -0.49
ZNF548-211ENST00000600927 M0R296 226 aa12.02□□□□□ -0.49
ZNF548-211ENST00000600927 PAPSS1O43252 624 aaPredicted RBP12.02□□□□□ -0.49
ZNF548-211ENST00000600927 RHOXF2BP0C7M4 288 aa12.02□□□□□ -0.49
ZNF548-211ENST00000600927 FAM200BP0CF97 657 aa12.02□□□□□ -0.49
ZNF548-211ENST00000600927 GPD1P21695 349 aa12.02□□□□□ -0.49
ZNF548-211ENST00000600927 FCARP24071 287 aa12.02□□□□□ -0.49
ZNF548-211ENST00000600927 ACAT1P24752 427 aaKnown RBP12.02□□□□□ -0.49
ZNF548-211ENST00000600927 GBP1P32455 592 aa12.02□□□□□ -0.49
ZNF548-211ENST00000600927 FNTAP49354 379 aa12.02□□□□□ -0.49
ZNF548-211ENST00000600927 TUFMP49411 452 aaKnown RBP12.02□□□□□ -0.49
ZNF548-211ENST00000600927 NFE2Q16621 373 aaPredicted RBP12.02□□□□□ -0.49
ZNF548-211ENST00000600927 FAM102AQ5T9C2 384 aaPredicted RBP12.02□□□□□ -0.49
ZNF548-211ENST00000600927 CYP4A22Q5TCH4 519 aa12.02□□□□□ -0.49
ZNF548-211ENST00000600927 CCNI2Q6ZMN8 369 aaPredicted RBP12.02□□□□□ -0.49
ZNF548-211ENST00000600927 C4orf50Q6ZRC1 276 aa12.02□□□□□ -0.49
ZNF548-211ENST00000600927 HFE2Q6ZVN8 426 aa12.02□□□□□ -0.49
ZNF548-211ENST00000600927 PAQR9Q6ZVX9 377 aa12.02□□□□□ -0.49
ZNF548-211ENST00000600927 PDZD4Q76G19 769 aaPredicted RBP12.02□□□□□ -0.49
ZNF548-211ENST00000600927 BEND5Q7L4P6 421 aa12.02□□□□□ -0.49
ZNF548-211ENST00000600927 HS6ST3Q8IZP7 471 aa12.02□□□□□ -0.49
ZNF548-211ENST00000600927 ELMOD1Q8N336 334 aa12.02□□□□□ -0.49
ZNF548-211ENST00000600927 RSAD2Q8WXG1 361 aa12.02□□□□□ -0.49
ZNF548-211ENST00000600927 SLCO2A1Q92959 643 aa12.02□□□□□ -0.49
ZNF548-211ENST00000600927 TCEAL4Q96EI5 215 aa12.02□□□□□ -0.49
ZNF548-211ENST00000600927 FUBP3Q96I24 572 aaKnown RBP eCLIP12.02□□□□□ -0.49
ZNF548-211ENST00000600927 TBCBQ99426 244 aa12.02□□□□□ -0.49
ZNF548-211ENST00000600927 RHOXF2Q9BQY4 288 aa12.02□□□□□ -0.49
ZNF548-211ENST00000600927 CORO1BQ9BR76 489 aa12.02□□□□□ -0.49
ZNF548-211ENST00000600927 LRRC1Q9BTT6 524 aa12.02□□□□□ -0.49
ZNF548-211ENST00000600927 TRIM62Q9BVG3 475 aa12.02□□□□□ -0.49
ZNF548-211ENST00000600927 FAM129AQ9BZQ8 928 aa12.02□□□□□ -0.49
ZNF548-211ENST00000600927 TRIM7Q9C029 511 aa12.02□□□□□ -0.49
ZNF548-211ENST00000600927 PRDM16Q9HAZ2 1276 aa12.02□□□□□ -0.49
ZNF548-211ENST00000600927 CRTAC1Q9NQ79 661 aa12.02□□□□□ -0.49
ZNF548-211ENST00000600927 GDF3Q9NR23 364 aa12.02□□□□□ -0.49
ZNF548-211ENST00000600927 ASAH2Q9NR71 780 aa12.02□□□□□ -0.49
ZNF548-211ENST00000600927 METTL5Q9NRN9 209 aaKnown RBP12.02□□□□□ -0.49
ZNF548-211ENST00000600927 RRN3Q9NYV6 651 aa12.02□□□□□ -0.49
ZNF548-211ENST00000600927 SLC27A5Q9Y2P5 690 aa12.02□□□□□ -0.49
ZNF548-211ENST00000600927 MRPS23Q9Y3D9 190 aaKnown RBP12.02□□□□□ -0.49
ZNF548-211ENST00000600927 NUMBLQ9Y6R0 609 aa12.02□□□□□ -0.49
ZNF548-211ENST00000600927 MYBPHLA2RUH7 354 aa12.01□□□□□ -0.49
ZNF548-211ENST00000600927 F8VP50 259 aa12.01□□□□□ -0.49
ZNF548-211ENST00000600927 GOLGA8SH3BPF8 625 aa12.01□□□□□ -0.49
ZNF548-211ENST00000600927 ZNF197O14709 1029 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms