RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 SIM1P81133 766 aaPredicted RBP11.16□□□□□ -0.62
RFFL-209ENST00000581265 GFPT1Q06210 699 aaPredicted RBP11.16□□□□□ -0.62
RFFL-209ENST00000581265 ZNF33AQ06730 810 aa11.16□□□□□ -0.62
RFFL-209ENST00000581265 PPP3CAQ08209 521 aa11.16□□□□□ -0.62
RFFL-209ENST00000581265 C10orf120Q5SQS8 335 aa11.16□□□□□ -0.62
RFFL-209ENST00000581265 TOGARAM2Q6ZUX3 1019 aa11.16□□□□□ -0.62
RFFL-209ENST00000581265 CCDC186Q7Z3E2 898 aa11.16□□□□□ -0.62
RFFL-209ENST00000581265 RABEPKQ7Z6M1 372 aa11.16□□□□□ -0.62
RFFL-209ENST00000581265 SCD5Q86SK9 330 aa11.16□□□□□ -0.62
RFFL-209ENST00000581265 PROSER1Q86XN7 944 aa11.16□□□□□ -0.62
RFFL-209ENST00000581265 HSCBQ8IWL3 235 aa11.16□□□□□ -0.62
RFFL-209ENST00000581265 TAS1R2Q8TE23 839 aa11.16□□□□□ -0.62
RFFL-209ENST00000581265 ZNF419Q96HQ0 510 aaPredicted RBP11.16□□□□□ -0.62
RFFL-209ENST00000581265 FAXDC2Q96IV6 333 aa11.16□□□□□ -0.62
RFFL-209ENST00000581265 DUSP16Q9BY84 665 aa11.16□□□□□ -0.62
RFFL-209ENST00000581265 DNAI2Q9GZS0 605 aa11.16□□□□□ -0.62
RFFL-209ENST00000581265 APOBEC3GQ9HC16 384 aaKnown RBP11.16□□□□□ -0.62
RFFL-209ENST00000581265 CLIC5Q9NZA1 410 aa11.16□□□□□ -0.62
RFFL-209ENST00000581265 NUDT5Q9UKK9 219 aa11.16□□□□□ -0.62
RFFL-209ENST00000581265 SLC27A6Q9Y2P4 619 aa11.16□□□□□ -0.62
RFFL-209ENST00000581265 TNRC6BQ9UPQ9 1833 aaKnown RBP11.15□□□□□ -0.62
RFFL-209ENST00000581265 FAM237AA0A1B0GTK4 181 aa11.15□□□□□ -0.62
RFFL-209ENST00000581265 SPAARA0A1B0GVQ0 90 aa11.15□□□□□ -0.62
RFFL-209ENST00000581265 A0A1W2PQD8 194 aa11.15□□□□□ -0.62
RFFL-209ENST00000581265 STC2O76061 302 aa11.15□□□□□ -0.62
RFFL-209ENST00000581265 KLKB1P03952 638 aa11.15□□□□□ -0.62
RFFL-209ENST00000581265 CFIP05156 583 aa11.15□□□□□ -0.62
RFFL-209ENST00000581265 NDUFV2P19404 249 aa11.15□□□□□ -0.62
RFFL-209ENST00000581265 RPL13P26373 211 aaKnown RBP11.15□□□□□ -0.62
RFFL-209ENST00000581265 GTF2H1P32780 548 aa11.15□□□□□ -0.62
RFFL-209ENST00000581265 CHKAP35790 457 aa11.15□□□□□ -0.62
RFFL-209ENST00000581265 PSMC2P35998 433 aaKnown RBP11.15□□□□□ -0.62
RFFL-209ENST00000581265 COG7P83436 770 aa11.15□□□□□ -0.62
RFFL-209ENST00000581265 TADA2BQ86TJ2 420 aa11.15□□□□□ -0.62
RFFL-209ENST00000581265 METTL3Q86U44 580 aaKnown RBP11.15□□□□□ -0.62
RFFL-209ENST00000581265 SLC41A1Q8IVJ1 513 aa11.15□□□□□ -0.62
RFFL-209ENST00000581265 GUF1Q8N442 669 aaKnown RBP11.15□□□□□ -0.62
RFFL-209ENST00000581265 DEFB119Q8N690 84 aa11.15□□□□□ -0.62
RFFL-209ENST00000581265 HNRNPLLQ8WVV9 542 aaKnown RBP11.15□□□□□ -0.62
RFFL-209ENST00000581265 JAKMIP2Q96AA8 810 aa11.15□□□□□ -0.62
RFFL-209ENST00000581265 P2RY11Q96G91 374 aa11.15□□□□□ -0.62
RFFL-209ENST00000581265 MRGPRX1Q96LB2 322 aa11.15□□□□□ -0.62
RFFL-209ENST00000581265 CDK5RAP1Q96SZ6 601 aaKnown RBP11.15□□□□□ -0.62
RFFL-209ENST00000581265 UBXN6Q9BZV1 441 aa11.15□□□□□ -0.62
RFFL-209ENST00000581265 NIF3L1Q9GZT8 377 aa11.15□□□□□ -0.62
RFFL-209ENST00000581265 NAGPAQ9UK23 515 aa11.15□□□□□ -0.62
RFFL-209ENST00000581265 ZNF510Q9Y2H8 683 aa11.15□□□□□ -0.62
RFFL-209ENST00000581265 MYH10P35580 1976 aa11.15□□□□□ -0.62
RFFL-209ENST00000581265 WASH3PC4AMC7 463 aa11.14□□□□□ -0.63
RFFL-209ENST00000581265 ARHGAP33O14559 1287 aa11.14□□□□□ -0.63
RFFL-209ENST00000581265 NPC1O15118 1278 aa11.14□□□□□ -0.63
RFFL-209ENST00000581265 MDM4O15151 490 aa11.14□□□□□ -0.63
RFFL-209ENST00000581265 PENKP01210 267 aaPredicted RBP11.14□□□□□ -0.63
RFFL-209ENST00000581265 TRIM49P0CI25 452 aa11.14□□□□□ -0.63
RFFL-209ENST00000581265 TRIM49CP0CI26 452 aa11.14□□□□□ -0.63
RFFL-209ENST00000581265 RALAP11233 206 aa11.14□□□□□ -0.63
RFFL-209ENST00000581265 KRT13P13646 458 aa11.14□□□□□ -0.63
RFFL-209ENST00000581265 CD58P19256 250 aa11.14□□□□□ -0.63
RFFL-209ENST00000581265 SYKP43405 635 aa11.14□□□□□ -0.63
RFFL-209ENST00000581265 ZNF132P52740 706 aa11.14□□□□□ -0.63
RFFL-209ENST00000581265 ATXN3P54252 364 aaPredicted RBP11.14□□□□□ -0.63
RFFL-209ENST00000581265 C19orf57Q0VDD7 668 aa11.14□□□□□ -0.63
RFFL-209ENST00000581265 DPYDQ12882 1025 aa11.14□□□□□ -0.63
RFFL-209ENST00000581265 ADAM9Q13443 819 aa11.14□□□□□ -0.63
RFFL-209ENST00000581265 ENPP2Q13822 863 aa11.14□□□□□ -0.63
RFFL-209ENST00000581265 PPP1R26Q5T8A7 1209 aaPredicted RBP11.14□□□□□ -0.63
RFFL-209ENST00000581265 KRT39Q6A163 491 aa11.14□□□□□ -0.63
RFFL-209ENST00000581265 FAM186BQ8IYM0 893 aa11.14□□□□□ -0.63
RFFL-209ENST00000581265 HDDC3Q8N4P3 179 aa11.14□□□□□ -0.63
RFFL-209ENST00000581265 TTC39CQ8N584 583 aa11.14□□□□□ -0.63
RFFL-209ENST00000581265 TRIML1Q8N9V2 468 aa11.14□□□□□ -0.63
RFFL-209ENST00000581265 CCDC150Q8NCX0 1101 aa11.14□□□□□ -0.63
RFFL-209ENST00000581265 CCDC47Q96A33 483 aaKnown RBP11.14□□□□□ -0.63
RFFL-209ENST00000581265 LRIG1Q96JA1 1093 aa11.14□□□□□ -0.63
RFFL-209ENST00000581265 SPATA32Q96LK8 384 aa11.14□□□□□ -0.63
RFFL-209ENST00000581265 HEXIM2Q96MH2 286 aaKnown RBP11.14□□□□□ -0.63
RFFL-209ENST00000581265 DCLK3Q9C098 648 aa11.14□□□□□ -0.63
RFFL-209ENST00000581265 FAM124BQ9H5Z6 455 aaPredicted RBP11.14□□□□□ -0.63
RFFL-209ENST00000581265 TMEM8AQ9HCN3 771 aa11.14□□□□□ -0.63
RFFL-209ENST00000581265 CACNA2D2Q9NY47 1150 aa11.14□□□□□ -0.63
RFFL-209ENST00000581265 PLK2Q9NYY3 685 aa11.14□□□□□ -0.63
RFFL-209ENST00000581265 CYP8B1Q9UNU6 501 aa11.14□□□□□ -0.63
RFFL-209ENST00000581265 MAPK8IP1Q9UQF2 711 aa11.14□□□□□ -0.63
RFFL-209ENST00000581265 GCN1Q92616 2671 aaKnown RBP11.14□□□□□ -0.63
RFFL-209ENST00000581265 ADAMTS20P59510 1910 aa11.13□□□□□ -0.63
RFFL-209ENST00000581265 ATXN2Q99700 1313 aaKnown RBP11.13□□□□□ -0.63
RFFL-209ENST00000581265 OPHN1O60890 802 aa11.13□□□□□ -0.63
RFFL-209ENST00000581265 SYPP08247 313 aa11.13□□□□□ -0.63
RFFL-209ENST00000581265 NDUFA8P51970 172 aa11.13□□□□□ -0.63
RFFL-209ENST00000581265 MFAP3P55082 362 aa11.13□□□□□ -0.63
RFFL-209ENST00000581265 SCAPQ12770 1279 aa11.13□□□□□ -0.63
RFFL-209ENST00000581265 SLC14A1Q13336 389 aa11.13□□□□□ -0.63
RFFL-209ENST00000581265 ZCWPW2Q504Y3 356 aa11.13□□□□□ -0.63
RFFL-209ENST00000581265 RAB41Q5JT25 222 aa11.13□□□□□ -0.63
RFFL-209ENST00000581265 FYB2Q5VWT5 728 aa11.13□□□□□ -0.63
RFFL-209ENST00000581265 CHCHD4Q8N4Q1 142 aa11.13□□□□□ -0.63
RFFL-209ENST00000581265 MINDY1Q8N5J2 469 aa11.13□□□□□ -0.63
RFFL-209ENST00000581265 FOXJ1Q92949 421 aa11.13□□□□□ -0.63
RFFL-209ENST00000581265 BHMTQ93088 406 aa11.13□□□□□ -0.63
RFFL-209ENST00000581265 HSPA12BQ96MM6 686 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms