RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 CACNA2D1P54289 1103 aa8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 PSMC1P62191 440 aaKnown RBP8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 NOP14P78316 857 aaKnown RBP8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 MYL7Q01449 175 aa8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 SERINC3Q13530 473 aa8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 ITPR3Q14573 2671 aa8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 TEAD4Q15561 434 aa8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 INAVAQ3KP66 663 aa8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 CRELD2Q6UXH1 353 aaPredicted RBP8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 ZNF574Q6ZN55 896 aaPredicted RBP8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 FAM124AQ86V42 546 aa8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 CACUL1Q86Y37 369 aa8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 DHX40Q8IX18 779 aaKnown RBP8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 ADGRF2Q8IZF7 708 aa8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 TMEM86AQ8N2M4 240 aa8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 EID2Q8N6I1 236 aa8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 ARID1BQ8NFD5 2236 aaPredicted RBP8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 SAP25Q8TEE9 199 aa8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 SNX29Q8TEQ0 813 aa8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 SCFD1Q8WVM8 642 aa8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 BIRC7Q96CA5 298 aa8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 SIPA1Q96FS4 1042 aa8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 ZNF560Q96MR9 790 aa8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 ZNF578Q96N58 590 aaPredicted RBP8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 MMTAG2Q9BU76 263 aaKnown RBP8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 TIPINQ9BVW5 301 aa8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 SLC6A16Q9GZN6 736 aa8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 PCED1AQ9H1Q7 454 aa8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 BRMS1Q9HCU9 246 aa8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 MAGEC2Q9UBF1 373 aaPredicted RBP8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 DNM3Q9UQ16 869 aa8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 CLCA2Q9UQC9 943 aa8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 ITPR2Q14571 2701 aa8.15□□□□□ -1.1
SMARCE1-217ENST00000580654 NEDD8-MDP1E9PL57 170 aa8.15□□□□□ -1.1
SMARCE1-217ENST00000580654 F8VP50 259 aa8.15□□□□□ -1.1
SMARCE1-217ENST00000580654 K7ENP7 123 aa8.15□□□□□ -1.1
SMARCE1-217ENST00000580654 KLK10O43240 276 aa8.15□□□□□ -1.1
SMARCE1-217ENST00000580654 SUV39H1O43463 412 aa8.15□□□□□ -1.1
SMARCE1-217ENST00000580654 TSPAN3O60637 253 aa8.15□□□□□ -1.1
SMARCE1-217ENST00000580654 PFKFB2O60825 505 aa8.15□□□□□ -1.1
SMARCE1-217ENST00000580654 HUS1O60921 280 aa8.15□□□□□ -1.1
SMARCE1-217ENST00000580654 MYF5P13349 255 aa8.15□□□□□ -1.1
SMARCE1-217ENST00000580654 ACO1P21399 889 aaKnown RBP8.15□□□□□ -1.1
SMARCE1-217ENST00000580654 POLR2BP30876 1174 aaKnown RBP8.15□□□□□ -1.1
SMARCE1-217ENST00000580654 SMTNP53814 917 aa8.15□□□□□ -1.1
SMARCE1-217ENST00000580654 RIPPLY3P57055 190 aa8.15□□□□□ -1.1
SMARCE1-217ENST00000580654 ORC1Q13415 861 aa8.15□□□□□ -1.1
SMARCE1-217ENST00000580654 UBAP2LQ14157 1087 aaKnown RBP8.15□□□□□ -1.1
SMARCE1-217ENST00000580654 SOWAHAQ2M3V2 549 aa8.15□□□□□ -1.1
SMARCE1-217ENST00000580654 LINC00303Q3SY05 128 aa8.15□□□□□ -1.1
SMARCE1-217ENST00000580654 INO80CQ6PI98 192 aaPredicted RBP8.15□□□□□ -1.1
SMARCE1-217ENST00000580654 VSTM1Q6UX27 236 aa8.15□□□□□ -1.1
SMARCE1-217ENST00000580654 CYP4X1Q8N118 509 aa8.15□□□□□ -1.1
SMARCE1-217ENST00000580654 IGSF22Q8N9C0 903 aa8.15□□□□□ -1.1
SMARCE1-217ENST00000580654 C1orf127Q8N9H9 656 aa8.15□□□□□ -1.1
SMARCE1-217ENST00000580654 KBTBD7Q8WVZ9 684 aa8.15□□□□□ -1.1
SMARCE1-217ENST00000580654 KCNE4Q8WWG9 221 aa8.15□□□□□ -1.1
SMARCE1-217ENST00000580654 PRCCQ92733 491 aaPredicted RBP8.15□□□□□ -1.1
SMARCE1-217ENST00000580654 CEP295NLQ96MC4 621 aa8.15□□□□□ -1.1
SMARCE1-217ENST00000580654 SYT15Q9BQS2 421 aa8.15□□□□□ -1.1
SMARCE1-217ENST00000580654 FAM117AQ9C073 453 aa8.15□□□□□ -1.1
SMARCE1-217ENST00000580654 IKZF4Q9H2S9 585 aa8.15□□□□□ -1.1
SMARCE1-217ENST00000580654 CCSER2Q9H7U1 834 aa8.15□□□□□ -1.1
SMARCE1-217ENST00000580654 HSPBP1Q9NZL4 362 aa8.15□□□□□ -1.1
SMARCE1-217ENST00000580654 MARK1Q9P0L2 795 aa8.15□□□□□ -1.1
SMARCE1-217ENST00000580654 THAP10Q9P2Z0 257 aaPredicted RBP8.15□□□□□ -1.1
SMARCE1-217ENST00000580654 FBXO10Q9UK96 956 aa8.15□□□□□ -1.1
SMARCE1-217ENST00000580654 AGAP1Q9UPQ3 857 aa8.15□□□□□ -1.1
SMARCE1-217ENST00000580654 SH3BP1Q9Y3L3 701 aa8.15□□□□□ -1.1
SMARCE1-217ENST00000580654 NME7Q9Y5B8 376 aa8.15□□□□□ -1.1
SMARCE1-217ENST00000580654 HEMK1Q9Y5R4 338 aaPredicted RBP8.15□□□□□ -1.1
SMARCE1-217ENST00000580654 CLEC18AA5D8T8 446 aa8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 CDC45O75419 566 aa8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 DXOO77932 396 aaKnown RBP8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 AFPP02771 609 aaKnown RBP8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 WNT1P04628 370 aa8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 ITGB3P05106 788 aa8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 MPOP05164 745 aa8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 IRF1P10914 325 aa8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 PDIA4P13667 645 aaKnown RBP8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 ITGB6P18564 788 aa8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 CR2P20023 1033 aa8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 CDK11BP21127 795 aaKnown RBP8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 PRKCHP24723 683 aa8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 CD27P26842 260 aa8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 PNPLA4P41247 253 aa8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 LHX1P48742 406 aa8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 DGKGP49619 791 aa8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 PGFP49763 221 aa8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 ILKQ13418 452 aa8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 STARD3Q14849 445 aa8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 IL17AQ16552 155 aa8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 KMT5BQ4FZB7 885 aa8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 ARSHQ5FYA8 562 aa8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 CLEC18BQ6UXF7 455 aa8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 KDM7AQ6ZMT4 941 aa8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 ATG14Q6ZNE5 492 aa8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 C4orf50Q6ZRC1 276 aa8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 TPGS1Q6ZTW0 290 aa8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 KANSL1Q7Z3B3 1105 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms