RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 TRIP4Q15650 581 aaPredicted RBP7.3□□□□□ -1.24
SMG6-209ENST00000571442 ASIC2Q16515 512 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 CLEC16AQ2KHT3 1053 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 SMYD5Q6GMV2 418 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 MMS22LQ6ZRQ5 1243 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 HTR3DQ70Z44 454 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 TMEM25Q86YD3 366 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 VSTM4Q8IW00 320 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 CCDC105Q8IYK2 499 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 ARHGAP18Q8N392 663 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 FBXL6Q8N531 539 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 TMEM35BQ8NCS4 154 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 JOSD2Q8TAC2 188 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 FAM149B1Q96BN6 582 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 FCRL2Q96LA5 508 aaPredicted RBP7.3□□□□□ -1.24
SMG6-209ENST00000571442 SLC2A13Q96QE2 648 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 C11orf70Q9BRQ4 267 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 NACA2Q9H009 215 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 LTB4R2Q9NPC1 389 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 ANLNQ9NQW6 1124 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 ABCC13Q9NSE7 274 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 POLR3BQ9NW08 1133 aaPredicted RBP7.3□□□□□ -1.24
SMG6-209ENST00000571442 C2orf42Q9NWW7 574 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 AIPL1Q9NZN9 384 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 DLGAP2Q9P1A6 1054 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 TMEM59LQ9UK28 342 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 AGO1Q9UL18 857 aaKnown RBP7.3□□□□□ -1.24
SMG6-209ENST00000571442 CLEC4EQ9ULY5 219 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 CAPN11Q9UMQ6 739 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 SH3BP1Q9Y3L3 701 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 ITIH6Q6UXX5 1313 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 FAM186AA6NE01 2351 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 GOLGA6L7A0A1B0GV03 622 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 A0A1W2PQJ5 194 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 KANSL1LA0AUZ9 987 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 GOLGA8SH3BPF8 625 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 GFRA2O00451 464 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 LSM8O95777 96 aaKnown RBP7.29□□□□□ -1.24
SMG6-209ENST00000571442 CHRNB1P11230 501 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 NCAM1P13591 858 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 AOC1P19801 751 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 MMP8P22894 467 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 AVPR2P30518 371 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 CORO1AP31146 461 aaKnown RBP7.29□□□□□ -1.24
SMG6-209ENST00000571442 SLC6A4P31645 630 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 GALK1P51570 392 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 KPNA1P52294 538 aaPredicted RBP7.29□□□□□ -1.24
SMG6-209ENST00000571442 PLCB2Q00722 1185 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 PFKPQ01813 784 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 CENPCQ03188 943 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 PRKCQQ04759 706 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 TBX2Q13207 712 aaPredicted RBP7.29□□□□□ -1.24
SMG6-209ENST00000571442 UBXN2BQ14CS0 331 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 PDGFRLQ15198 375 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 ITPRIPL2Q3MIP1 535 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 LY6G5CQ5SRR4 150 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 ARTNQ5T4W7 220 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 SFMBT2Q5VUG0 894 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 NADSYN1Q6IA69 706 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 FSTL4Q6MZW2 842 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 CC2D1AQ6P1N0 951 aaPredicted RBP7.29□□□□□ -1.24
SMG6-209ENST00000571442 PKN3Q6P5Z2 889 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 WDR59Q6PJI9 974 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 SARM1Q6SZW1 724 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 Q6ZS52 159 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 MON1BQ7L1V2 547 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 RSRC2Q7L4I2 434 aaKnown RBP7.29□□□□□ -1.24
SMG6-209ENST00000571442 SLC26A9Q7LBE3 791 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 ERICH1Q86X53 443 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 ZNF677Q86XU0 584 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 DENND1CQ8IV53 801 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 PHTF2Q8N3S3 785 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 EMC1Q8N766 993 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 PRSS33Q8NF86 280 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 ZNF397Q8NF99 534 aaPredicted RBP7.29□□□□□ -1.24
SMG6-209ENST00000571442 PJA1Q8NG27 643 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 CSGALNACT1Q8TDX6 532 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 RNF139Q8WU17 664 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 FAM3CQ92520 227 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 C18orf8Q96DM3 657 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 SLC39A13Q96H72 371 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 PRRX2Q99811 253 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 EDEM3Q9BZQ6 932 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 PDCL3Q9H2J4 239 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 POPDC2Q9HBU9 364 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 METTL5Q9NRN9 209 aaKnown RBP7.29□□□□□ -1.24
SMG6-209ENST00000571442 TMPRSS4Q9NRS4 437 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 SEPT11Q9NVA2 429 aaKnown RBP7.29□□□□□ -1.24
SMG6-209ENST00000571442 THG1LQ9NWX6 298 aaKnown RBP7.29□□□□□ -1.24
SMG6-209ENST00000571442 ARHGAP20Q9P2F6 1191 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 HCN2Q9UL51 889 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 MYO6Q9UM54 1294 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 NDRG2Q9UN36 371 aaKnown RBP7.29□□□□□ -1.24
SMG6-209ENST00000571442 RIF1Q5UIP0 2472 aaKnown RBP7.29□□□□□ -1.24
SMG6-209ENST00000571442 CACNA1IQ9P0X4 2223 aa7.29□□□□□ -1.24
SMG6-209ENST00000571442 PTPRZ1P23471 2315 aaPredicted RBP7.29□□□□□ -1.24
SMG6-209ENST00000571442 MYO18AQ92614 2054 aaKnown RBP7.28□□□□□ -1.24
SMG6-209ENST00000571442 SYNJ2BP-COX16A0A087WUM0 186 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 FAM170BA6NMN3 283 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 TMCO5BA8MYB1 307 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms