RNA–Protein interactions for RNA: ENST00000566400.5

BBS4-210, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 2,055 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-210ENST00000566400 CFAP36Q96G28 342 aa9.65□□□□□ -0.87
BBS4-210ENST00000566400 SRPK1Q96SB4 655 aaKnown RBP9.65□□□□□ -0.87
BBS4-210ENST00000566400 MRPL45Q9BRJ2 306 aaKnown RBP9.65□□□□□ -0.87
BBS4-210ENST00000566400 ADAMTS10Q9H324 1103 aa9.65□□□□□ -0.87
BBS4-210ENST00000566400 MMADHCQ9H3L0 296 aaPredicted RBP9.65□□□□□ -0.87
BBS4-210ENST00000566400 KCNK4Q9NYG8 393 aa9.65□□□□□ -0.87
BBS4-210ENST00000566400 RNF181Q9P0P0 153 aa9.65□□□□□ -0.87
BBS4-210ENST00000566400 HAO1Q9UJM8 370 aa9.65□□□□□ -0.87
BBS4-210ENST00000566400 STAP1Q9ULZ2 295 aa9.65□□□□□ -0.87
BBS4-210ENST00000566400 SORCS3Q9UPU3 1222 aa9.65□□□□□ -0.87
BBS4-210ENST00000566400 PLLPQ9Y342 182 aa9.65□□□□□ -0.87
BBS4-210ENST00000566400 CEP350Q5VT06 3117 aa9.64□□□□□ -0.87
BBS4-210ENST00000566400 POLR2AP24928 1970 aaKnown RBP9.64□□□□□ -0.87
BBS4-210ENST00000566400 SLC15A5A6NIM6 579 aa9.64□□□□□ -0.87
BBS4-210ENST00000566400 FAM159BA6NKW6 160 aa9.64□□□□□ -0.87
BBS4-210ENST00000566400 KPNA7A9QM74 516 aa9.64□□□□□ -0.87
BBS4-210ENST00000566400 TRIM49D1C9J1S8 452 aa9.64□□□□□ -0.87
BBS4-210ENST00000566400 H3BRJ5 948 aa9.64□□□□□ -0.87
BBS4-210ENST00000566400 XPO1O14980 1071 aaKnown RBP9.64□□□□□ -0.87
BBS4-210ENST00000566400 OPHN1O60890 802 aa9.64□□□□□ -0.87
BBS4-210ENST00000566400 GRAP2O75791 330 aa9.64□□□□□ -0.87
BBS4-210ENST00000566400 KCNE1P15382 129 aa9.64□□□□□ -0.87
BBS4-210ENST00000566400 ELF1P32519 619 aa9.64□□□□□ -0.87
BBS4-210ENST00000566400 CRHR1P34998 444 aa9.64□□□□□ -0.87
BBS4-210ENST00000566400 GNL1P36915 607 aaPredicted RBP9.64□□□□□ -0.87
BBS4-210ENST00000566400 ADCYAP1R1P41586 468 aa9.64□□□□□ -0.87
BBS4-210ENST00000566400 MATKP42679 507 aa9.64□□□□□ -0.87
BBS4-210ENST00000566400 PSMC4P43686 418 aa9.64□□□□□ -0.87
BBS4-210ENST00000566400 TAF6P49848 677 aa9.64□□□□□ -0.87
BBS4-210ENST00000566400 ZRSR2Q15696 482 aaKnown RBP9.64□□□□□ -0.87
BBS4-210ENST00000566400 MARCH8Q5T0T0 291 aa9.64□□□□□ -0.87
BBS4-210ENST00000566400 ALKAL1Q6UXT8 129 aa9.64□□□□□ -0.87
BBS4-210ENST00000566400 CAND1Q86VP6 1230 aaKnown RBP9.64□□□□□ -0.87
BBS4-210ENST00000566400 KIF2BQ8N4N8 673 aa9.64□□□□□ -0.87
BBS4-210ENST00000566400 APPL2Q8NEU8 664 aa9.64□□□□□ -0.87
BBS4-210ENST00000566400 SPOCK2Q92563 424 aa9.64□□□□□ -0.87
BBS4-210ENST00000566400 NSL1Q96IY1 281 aa9.64□□□□□ -0.87
BBS4-210ENST00000566400 FAM111AQ96PZ2 611 aa9.64□□□□□ -0.87
BBS4-210ENST00000566400 KATNBL1Q9H079 304 aa9.64□□□□□ -0.87
BBS4-210ENST00000566400 WWP1Q9H0M0 922 aa9.64□□□□□ -0.87
BBS4-210ENST00000566400 DHX35Q9H5Z1 703 aaKnown RBP9.64□□□□□ -0.87
BBS4-210ENST00000566400 STN1Q9H668 368 aaKnown RBP9.64□□□□□ -0.87
BBS4-210ENST00000566400 SNTG2Q9NY99 539 aa9.64□□□□□ -0.87
BBS4-210ENST00000566400 SLC17A7Q9P2U7 560 aa9.64□□□□□ -0.87
BBS4-210ENST00000566400 A0A0A0MRY4 1105 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 GOLGA8RI6L899 631 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 AP3B1O00203 1094 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 PIRO00625 290 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 NCAM2O15394 837 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 HUS1O60921 280 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 CSDE1O75534 798 aaKnown RBP9.63□□□□□ -0.87
BBS4-210ENST00000566400 DARSP14868 501 aaKnown RBP9.63□□□□□ -0.87
BBS4-210ENST00000566400 HOXA11P31270 313 aaPredicted RBP9.63□□□□□ -0.87
BBS4-210ENST00000566400 PDK1Q15118 436 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 SOWAHAQ2M3V2 549 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 SLC25A52Q3SY17 297 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 ANKRD23Q86SG2 305 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 MTDHQ86UE4 582 aaKnown RBP9.63□□□□□ -0.87
BBS4-210ENST00000566400 IGDCC3Q8IVU1 814 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 TOP6BLQ8N6T0 577 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 ANKLE1Q8NAG6 615 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 HTR3CQ8WXA8 447 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 KHSRPQ92945 711 aaKnown RBP eCLIP9.63□□□□□ -0.871e-7■■■□□ 16.7
BBS4-210ENST00000566400 E2F7Q96AV8 911 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 SERAC1Q96JX3 654 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 SPATA13Q96N96 652 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 CSPG4P5Q96PW8 444 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 PPP1R16BQ96T49 567 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 SLC9A7Q96T83 725 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 BTBD10Q9BSF8 475 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 TBC1D10AQ9BXI6 508 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 BRD8Q9H0E9 1235 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 R3HDMLQ9H3Y0 253 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 DCLRE1BQ9H816 532 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 RNPEPL1Q9HAU8 725 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.63□□□□□ -0.87
BBS4-210ENST00000566400 A0A0G2JND7 137 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 WDR91A4D1P6 747 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 SDR42E2A6NKP2 422 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 PDHXO00330 501 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 MTSS1O43312 755 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 DAB1O75553 588 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 DGKIO75912 1065 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 ALDH1A2O94788 518 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 WARSP23381 471 aaKnown RBP9.63□□□□□ -0.87
BBS4-210ENST00000566400 NOS2P35228 1153 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 GLUD2P49448 558 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 GRB14Q14449 540 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 XKR4Q5GH76 650 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 STEAP4Q687X5 459 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 LRRC8BQ6P9F7 803 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 KCNT2Q6UVM3 1135 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 UNC5AQ6ZN44 842 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 MARK2Q7KZI7 788 aaKnown RBP9.63□□□□□ -0.87
BBS4-210ENST00000566400 LONP2Q86WA8 852 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 CRLF3Q8IUI8 442 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 NME8Q8N427 588 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 TAB3Q8N5C8 712 aaPredicted RBP9.63□□□□□ -0.87
BBS4-210ENST00000566400 C7orf31Q8N865 590 aa9.63□□□□□ -0.87
BBS4-210ENST00000566400 ENDOVQ8N8Q3 282 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms