RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 CYP17A1P05093 508 aa13.07□□□□□ -0.32
SLIRP-211ENST00000557623 PNMA6AP0CW24 399 aaPredicted RBP13.07□□□□□ -0.32
SLIRP-211ENST00000557623 CHRNB1P11230 501 aa13.07□□□□□ -0.32
SLIRP-211ENST00000557623 CYP11B1P15538 503 aa13.07□□□□□ -0.32
SLIRP-211ENST00000557623 DRD1P21728 446 aa13.07□□□□□ -0.32
SLIRP-211ENST00000557623 STAT1P42224 750 aa13.07□□□□□ -0.32
SLIRP-211ENST00000557623 KLK7P49862 253 aa13.07□□□□□ -0.32
SLIRP-211ENST00000557623 PDCLQ13371 301 aa13.07□□□□□ -0.32
SLIRP-211ENST00000557623 FZD5Q13467 585 aa13.07□□□□□ -0.32
SLIRP-211ENST00000557623 DHCR24Q15392 516 aa13.07□□□□□ -0.32
SLIRP-211ENST00000557623 TXNDC11Q6PKC3 985 aa13.07□□□□□ -0.32
SLIRP-211ENST00000557623 C1orf210Q8IVY1 113 aa13.07□□□□□ -0.32
SLIRP-211ENST00000557623 BBS7Q8IWZ6 715 aa13.07□□□□□ -0.32
SLIRP-211ENST00000557623 SCUBE3Q8IX30 993 aa13.07□□□□□ -0.32
SLIRP-211ENST00000557623 CD101Q93033 1021 aa13.07□□□□□ -0.32
SLIRP-211ENST00000557623 PLD4Q96BZ4 506 aa13.07□□□□□ -0.32
SLIRP-211ENST00000557623 P2RY13Q9BPV8 354 aa13.07□□□□□ -0.32
SLIRP-211ENST00000557623 CHRDQ9H2X0 955 aa13.07□□□□□ -0.32
SLIRP-211ENST00000557623 CBX8Q9HC52 389 aa13.07□□□□□ -0.32
SLIRP-211ENST00000557623 NLRC4Q9NPP4 1024 aa13.07□□□□□ -0.32
SLIRP-211ENST00000557623 SPATA6Q9NWH7 488 aaPredicted RBP13.07□□□□□ -0.32
SLIRP-211ENST00000557623 RAPGEFL1Q9UHV5 662 aa13.07□□□□□ -0.32
SLIRP-211ENST00000557623 HBS1LQ9Y450 684 aaKnown RBP13.07□□□□□ -0.32
SLIRP-211ENST00000557623 SLC12A8A0AV02 714 aa13.06□□□□□ -0.32
SLIRP-211ENST00000557623 E5RJQ4 531 aa13.06□□□□□ -0.32
SLIRP-211ENST00000557623 SCAMP3O14828 347 aaKnown RBP13.06□□□□□ -0.32
SLIRP-211ENST00000557623 STC2O76061 302 aa13.06□□□□□ -0.32
SLIRP-211ENST00000557623 SERPINC1P01008 464 aa13.06□□□□□ -0.32
SLIRP-211ENST00000557623 ADH5P11766 374 aa13.06□□□□□ -0.32
SLIRP-211ENST00000557623 SOX5P35711 763 aa13.06□□□□□ -0.32
SLIRP-211ENST00000557623 EIF2DP41214 584 aaKnown RBP13.06□□□□□ -0.32
SLIRP-211ENST00000557623 GALK1P51570 392 aa13.06□□□□□ -0.32
SLIRP-211ENST00000557623 PRSS12P56730 875 aa13.06□□□□□ -0.32
SLIRP-211ENST00000557623 JAM2P57087 298 aa13.06□□□□□ -0.32
SLIRP-211ENST00000557623 GAD2Q05329 585 aa13.06□□□□□ -0.32
SLIRP-211ENST00000557623 TCF15Q12870 199 aa13.06□□□□□ -0.32
SLIRP-211ENST00000557623 FBXO43Q4G163 708 aa13.06□□□□□ -0.32
SLIRP-211ENST00000557623 PREPLQ4J6C6 727 aaPredicted RBP13.06□□□□□ -0.32
SLIRP-211ENST00000557623 TMEM196Q5HYL7 178 aa13.06□□□□□ -0.32
SLIRP-211ENST00000557623 MSANTD2Q6P1R3 559 aa13.06□□□□□ -0.32
SLIRP-211ENST00000557623 RHBDF2Q6PJF5 856 aa13.06□□□□□ -0.32
SLIRP-211ENST00000557623 BEND5Q7L4P6 421 aa13.06□□□□□ -0.32
SLIRP-211ENST00000557623 ZNF677Q86XU0 584 aa13.06□□□□□ -0.32
SLIRP-211ENST00000557623 PASD1Q8IV76 773 aa13.06□□□□□ -0.32
SLIRP-211ENST00000557623 FMNL3Q8IVF7 1028 aa13.06□□□□□ -0.32
SLIRP-211ENST00000557623 TMEM35BQ8NCS4 154 aa13.06□□□□□ -0.32
SLIRP-211ENST00000557623 CCDC26Q8TAB7 109 aa13.06□□□□□ -0.32
SLIRP-211ENST00000557623 IPO4Q8TEX9 1081 aaKnown RBP13.06□□□□□ -0.32
SLIRP-211ENST00000557623 CLEC4CQ8WTT0 213 aa13.06□□□□□ -0.32
SLIRP-211ENST00000557623 EDEM1Q92611 657 aa13.06□□□□□ -0.32
SLIRP-211ENST00000557623 RNF166Q96A37 237 aaPredicted RBP13.06□□□□□ -0.32
SLIRP-211ENST00000557623 FAM149B1Q96BN6 582 aa13.06□□□□□ -0.32
SLIRP-211ENST00000557623 PPP1R13BQ96KQ4 1090 aa13.06□□□□□ -0.32
SLIRP-211ENST00000557623 SPHK2Q9NRA0 654 aa13.06□□□□□ -0.32
SLIRP-211ENST00000557623 CYTH4Q9UIA0 394 aa13.06□□□□□ -0.32
SLIRP-211ENST00000557623 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.05□□□□□ -0.32
SLIRP-211ENST00000557623 EPHB6O15197 1021 aa13.05□□□□□ -0.32
SLIRP-211ENST00000557623 LAMTOR5O43504 91 aa13.05□□□□□ -0.32
SLIRP-211ENST00000557623 GREM1O60565 184 aa13.05□□□□□ -0.32
SLIRP-211ENST00000557623 GFPT2O94808 682 aa13.05□□□□□ -0.32
SLIRP-211ENST00000557623 GLI1P08151 1106 aa13.05□□□□□ -0.32
SLIRP-211ENST00000557623 HMBSP08397 361 aa13.05□□□□□ -0.32
SLIRP-211ENST00000557623 CDH5P33151 784 aaPredicted RBP13.05□□□□□ -0.32
SLIRP-211ENST00000557623 CHKAP35790 457 aa13.05□□□□□ -0.32
SLIRP-211ENST00000557623 HARS2P49590 506 aaKnown RBP13.05□□□□□ -0.32
SLIRP-211ENST00000557623 CCINQ13939 588 aa13.05□□□□□ -0.32
SLIRP-211ENST00000557623 PPP2R5DQ14738 602 aa13.05□□□□□ -0.32
SLIRP-211ENST00000557623 ANGPT1Q15389 498 aa13.05□□□□□ -0.32
SLIRP-211ENST00000557623 LY6G5CQ5SRR4 150 aa13.05□□□□□ -0.32
SLIRP-211ENST00000557623 FSTL4Q6MZW2 842 aa13.05□□□□□ -0.32
SLIRP-211ENST00000557623 Q6ZNB5 142 aa13.05□□□□□ -0.32
SLIRP-211ENST00000557623 CACNA2D4Q7Z3S7 1137 aa13.05□□□□□ -0.32
SLIRP-211ENST00000557623 LUZP1Q86V48 1076 aa13.05□□□□□ -0.32
SLIRP-211ENST00000557623 PACS2Q86VP3 889 aa13.05□□□□□ -0.32
SLIRP-211ENST00000557623 WDTC1Q8N5D0 677 aa13.05□□□□□ -0.32
SLIRP-211ENST00000557623 MSANTD4Q8NCY6 345 aa13.05□□□□□ -0.32
SLIRP-211ENST00000557623 C1orf131Q8NDD1 294 aaKnown RBP13.05□□□□□ -0.32
SLIRP-211ENST00000557623 WBP2Q969T9 261 aa13.05□□□□□ -0.32
SLIRP-211ENST00000557623 CHFRQ96EP1 664 aa13.05□□□□□ -0.32
SLIRP-211ENST00000557623 CPXM1Q96SM3 734 aa13.05□□□□□ -0.32
SLIRP-211ENST00000557623 SYNCQ9H7C4 482 aa13.05□□□□□ -0.32
SLIRP-211ENST00000557623 ATG2BQ96BY7 2078 aa13.04□□□□□ -0.32
SLIRP-211ENST00000557623 A0A1B0GTH6 734 aa13.04□□□□□ -0.32
SLIRP-211ENST00000557623 A0A1W2PQC6 194 aa13.04□□□□□ -0.32
SLIRP-211ENST00000557623 CAPN9O14815 690 aa13.04□□□□□ -0.32
SLIRP-211ENST00000557623 TEX33O43247 280 aa13.04□□□□□ -0.32
SLIRP-211ENST00000557623 HOXC11O43248 304 aaPredicted RBP13.04□□□□□ -0.32
SLIRP-211ENST00000557623 PAPSS1O43252 624 aaPredicted RBP13.04□□□□□ -0.32
SLIRP-211ENST00000557623 LSM8O95777 96 aaKnown RBP13.04□□□□□ -0.32
SLIRP-211ENST00000557623 CCDC172P0C7W6 258 aa13.04□□□□□ -0.32
SLIRP-211ENST00000557623 NCAM1P13591 858 aa13.04□□□□□ -0.32
SLIRP-211ENST00000557623 CORO1AP31146 461 aaKnown RBP13.04□□□□□ -0.32
SLIRP-211ENST00000557623 OPRD1P41143 372 aa13.04□□□□□ -0.32
SLIRP-211ENST00000557623 CCR3P51677 355 aa13.04□□□□□ -0.32
SLIRP-211ENST00000557623 TRIP4Q15650 581 aaPredicted RBP13.04□□□□□ -0.32
SLIRP-211ENST00000557623 NFKBIBQ15653 356 aa13.04□□□□□ -0.32
SLIRP-211ENST00000557623 ANO4Q32M45 955 aa13.04□□□□□ -0.32
SLIRP-211ENST00000557623 EFHC1Q5JVL4 640 aa13.04□□□□□ -0.32
SLIRP-211ENST00000557623 NOP9Q86U38 636 aaKnown RBP13.04□□□□□ -0.32
SLIRP-211ENST00000557623 ZDHHC17Q8IUH5 632 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms