RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 HIC1Q14526 733 aa11.79□□□□□ -0.52
SRP54-213ENST00000556994 FASTKD1Q53R41 847 aaKnown RBP11.79□□□□□ -0.52
SRP54-213ENST00000556994 FAM47CQ5HY64 1035 aa11.79□□□□□ -0.52
SRP54-213ENST00000556994 DPY19L2Q6NUT2 758 aa11.79□□□□□ -0.52
SRP54-213ENST00000556994 MTHFD1LQ6UB35 978 aa11.79□□□□□ -0.52
SRP54-213ENST00000556994 FAM183BPQ6ZVS7 135 aa11.79□□□□□ -0.52
SRP54-213ENST00000556994 C1orf127Q8N9H9 656 aa11.79□□□□□ -0.52
SRP54-213ENST00000556994 AGBL3Q8NEM8 1001 aa11.79□□□□□ -0.52
SRP54-213ENST00000556994 PCDH19Q8TAB3 1148 aa11.79□□□□□ -0.52
SRP54-213ENST00000556994 DEPDC1BQ8WUY9 529 aa11.79□□□□□ -0.52
SRP54-213ENST00000556994 TRAPPC12Q8WVT3 735 aa11.79□□□□□ -0.52
SRP54-213ENST00000556994 TMEM176AQ96HP8 235 aa11.79□□□□□ -0.52
SRP54-213ENST00000556994 NLRP4Q96MN2 994 aa11.79□□□□□ -0.52
SRP54-213ENST00000556994 NR1H4Q96RI1 486 aaPredicted RBP11.79□□□□□ -0.52
SRP54-213ENST00000556994 PDP2Q9P2J9 529 aa11.79□□□□□ -0.52
SRP54-213ENST00000556994 C2CD4BA6NLJ0 364 aa11.78□□□□□ -0.52
SRP54-213ENST00000556994 INO80B-WBP1J3KQ70 363 aa11.78□□□□□ -0.52
SRP54-213ENST00000556994 TRDMT1O14717 391 aaKnown RBP11.78□□□□□ -0.52
SRP54-213ENST00000556994 BUD23O43709 281 aaKnown RBP11.78□□□□□ -0.52
SRP54-213ENST00000556994 GSTT1P30711 240 aa11.78□□□□□ -0.52
SRP54-213ENST00000556994 CRHR1P34998 444 aa11.78□□□□□ -0.52
SRP54-213ENST00000556994 TCF7P36402 384 aaPredicted RBP11.78□□□□□ -0.52
SRP54-213ENST00000556994 GSTA3Q16772 222 aa11.78□□□□□ -0.52
SRP54-213ENST00000556994 VWA5B1Q5TIE3 1220 aa11.78□□□□□ -0.52
SRP54-213ENST00000556994 MAP1SQ66K74 1059 aaPredicted RBP11.78□□□□□ -0.52
SRP54-213ENST00000556994 ZNF534Q76KX8 674 aa11.78□□□□□ -0.52
SRP54-213ENST00000556994 RASSF3Q86WH2 238 aa11.78□□□□□ -0.52
SRP54-213ENST00000556994 C12orf29Q8N999 325 aa11.78□□□□□ -0.52
SRP54-213ENST00000556994 SLC26A7Q8TE54 656 aa11.78□□□□□ -0.52
SRP54-213ENST00000556994 KCNN1Q92952 543 aa11.78□□□□□ -0.52
SRP54-213ENST00000556994 SIGLEC10Q96LC7 697 aa11.78□□□□□ -0.52
SRP54-213ENST00000556994 CNPY3Q9BT09 278 aa11.78□□□□□ -0.52
SRP54-213ENST00000556994 TEX13BQ9BXU2 312 aa11.78□□□□□ -0.52
SRP54-213ENST00000556994 INO80BQ9C086 356 aaPredicted RBP11.78□□□□□ -0.52
SRP54-213ENST00000556994 ETAA1Q9NY74 926 aa11.78□□□□□ -0.52
SRP54-213ENST00000556994 SOX13Q9UN79 622 aa11.78□□□□□ -0.52
SRP54-213ENST00000556994 PSME4Q14997 1843 aa11.78□□□□□ -0.52
SRP54-213ENST00000556994 BRWD3Q6RI45 1802 aa11.78□□□□□ -0.52
SRP54-213ENST00000556994 LOC100653049A0A140TA62 436 aa11.78□□□□□ -0.52
SRP54-213ENST00000556994 APOL1O14791 398 aa11.78□□□□□ -0.52
SRP54-213ENST00000556994 ZMPSTE24O75844 475 aa11.78□□□□□ -0.52
SRP54-213ENST00000556994 KRT34O76011 436 aa11.78□□□□□ -0.52
SRP54-213ENST00000556994 FARP2O94887 1054 aaPredicted RBP11.78□□□□□ -0.52
SRP54-213ENST00000556994 GSRP00390 522 aa11.78□□□□□ -0.52
SRP54-213ENST00000556994 PROCP04070 461 aa11.78□□□□□ -0.52
SRP54-213ENST00000556994 ETS2P15036 469 aa11.78□□□□□ -0.52
SRP54-213ENST00000556994 CYP3A5P20815 502 aa11.78□□□□□ -0.52
SRP54-213ENST00000556994 GABRB2P47870 512 aa11.78□□□□□ -0.52
SRP54-213ENST00000556994 EFNA5P52803 228 aa11.78□□□□□ -0.52
SRP54-213ENST00000556994 WASHC5Q12768 1159 aa11.78□□□□□ -0.52
SRP54-213ENST00000556994 ASPHQ12797 758 aa11.78□□□□□ -0.52
SRP54-213ENST00000556994 TUBB3Q13509 450 aa11.78□□□□□ -0.52
SRP54-213ENST00000556994 SFT2D3Q587I9 215 aa11.78□□□□□ -0.52
SRP54-213ENST00000556994 NIM1KQ8IY84 436 aa11.78□□□□□ -0.52
SRP54-213ENST00000556994 GSDMBQ8TAX9 411 aa11.78□□□□□ -0.52
SRP54-213ENST00000556994 ZFAND2BQ8WV99 257 aa11.78□□□□□ -0.52
SRP54-213ENST00000556994 BCO2Q9BYV7 579 aa11.78□□□□□ -0.52
SRP54-213ENST00000556994 S100A14Q9HCY8 104 aa11.78□□□□□ -0.52
SRP54-213ENST00000556994 PNPOQ9NVS9 261 aa11.78□□□□□ -0.52
SRP54-213ENST00000556994 THAP1Q9NVV9 213 aa11.78□□□□□ -0.52
SRP54-213ENST00000556994 IL1RAPL1Q9NZN1 696 aa11.78□□□□□ -0.52
SRP54-213ENST00000556994 IGKV6D-21A0A0A0MT36 114 aa11.77□□□□□ -0.52
SRP54-213ENST00000556994 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.77□□□□□ -0.52
SRP54-213ENST00000556994 FAM159BA6NKW6 160 aa11.77□□□□□ -0.52
SRP54-213ENST00000556994 CILPO75339 1184 aa11.77□□□□□ -0.52
SRP54-213ENST00000556994 PRKG1Q13976 671 aa11.77□□□□□ -0.52
SRP54-213ENST00000556994 ACAP1Q15027 740 aa11.77□□□□□ -0.52
SRP54-213ENST00000556994 SURF1Q15526 300 aa11.77□□□□□ -0.52
SRP54-213ENST00000556994 LY6KQ17RY6 165 aa11.77□□□□□ -0.52
SRP54-213ENST00000556994 CNPY1Q3B7I2 92 aa11.77□□□□□ -0.52
SRP54-213ENST00000556994 CCDC14Q49A88 953 aa11.77□□□□□ -0.52
SRP54-213ENST00000556994 N4BP2L1Q5TBK1 243 aaPredicted RBP11.77□□□□□ -0.52
SRP54-213ENST00000556994 TMCO4Q5TGY1 634 aa11.77□□□□□ -0.52
SRP54-213ENST00000556994 ATF7IP2Q5U623 682 aa11.77□□□□□ -0.52
SRP54-213ENST00000556994 CASC4Q6P4E1 433 aa11.77□□□□□ -0.52
SRP54-213ENST00000556994 MPZL3Q6UWV2 235 aa11.77□□□□□ -0.52
SRP54-213ENST00000556994 SAMD7Q7Z3H4 446 aa11.77□□□□□ -0.52
SRP54-213ENST00000556994 WDR75Q8IWA0 830 aaKnown RBP11.77□□□□□ -0.52
SRP54-213ENST00000556994 ZBTB8OSQ8IWT0 167 aa11.77□□□□□ -0.52
SRP54-213ENST00000556994 RTKN2Q8IZC4 609 aa11.77□□□□□ -0.52
SRP54-213ENST00000556994 NETO2Q8NC67 525 aa11.77□□□□□ -0.52
SRP54-213ENST00000556994 ZNF280CQ8ND82 737 aa11.77□□□□□ -0.52
SRP54-213ENST00000556994 PIWIL2Q8TC59 973 aaKnown RBP11.77□□□□□ -0.52
SRP54-213ENST00000556994 PPP1R16BQ96T49 567 aa11.77□□□□□ -0.52
SRP54-213ENST00000556994 EBNA1BP2Q99848 306 aaKnown RBP11.77□□□□□ -0.52
SRP54-213ENST00000556994 PCDH18Q9HCL0 1135 aa11.77□□□□□ -0.52
SRP54-213ENST00000556994 ADAMTS6Q9UKP5 1117 aa11.77□□□□□ -0.52
SRP54-213ENST00000556994 EMCNQ9ULC0 261 aa11.77□□□□□ -0.52
SRP54-213ENST00000556994 MYO18AQ92614 2054 aaKnown RBP11.77□□□□□ -0.52
SRP54-213ENST00000556994 WDR27A2RRH5 827 aa11.77□□□□□ -0.53
SRP54-213ENST00000556994 LACTBL1A8MY62 500 aa11.77□□□□□ -0.53
SRP54-213ENST00000556994 B4GALT4O60513 344 aa11.77□□□□□ -0.53
SRP54-213ENST00000556994 RTN3O95197 1032 aaPredicted RBP11.77□□□□□ -0.53
SRP54-213ENST00000556994 TFE3P19532 575 aaPredicted RBP11.77□□□□□ -0.53
SRP54-213ENST00000556994 SLC1A6P48664 564 aa11.77□□□□□ -0.53
SRP54-213ENST00000556994 ATXN1P54253 815 aaKnown RBP11.77□□□□□ -0.53
SRP54-213ENST00000556994 GBE1Q04446 702 aa11.77□□□□□ -0.53
SRP54-213ENST00000556994 SLC10A2Q12908 348 aaPredicted RBP11.77□□□□□ -0.53
SRP54-213ENST00000556994 EFHC1Q5JVL4 640 aa11.77□□□□□ -0.53
SRP54-213ENST00000556994 TCHHL1Q5QJ38 904 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms