RNA–Protein interactions for RNA: ENST00000556771.5

MTHFD1-214, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-214ENST00000556771 SCUBE3Q8IX30 993 aa11.04□□□□□ -0.64
MTHFD1-214ENST00000556771 ZNF687Q8N1G0 1237 aa11.04□□□□□ -0.64
MTHFD1-214ENST00000556771 WDTC1Q8N5D0 677 aa11.04□□□□□ -0.64
MTHFD1-214ENST00000556771 DTWD2Q8NBA8 298 aa11.04□□□□□ -0.64
MTHFD1-214ENST00000556771 CCDC26Q8TAB7 109 aa11.04□□□□□ -0.64
MTHFD1-214ENST00000556771 DDX1Q92499 740 aaKnown RBP11.04□□□□□ -0.64
MTHFD1-214ENST00000556771 NDRG1Q92597 394 aaKnown RBP11.04□□□□□ -0.64
MTHFD1-214ENST00000556771 EDEM1Q92611 657 aa11.04□□□□□ -0.64
MTHFD1-214ENST00000556771 FAM149B1Q96BN6 582 aa11.04□□□□□ -0.64
MTHFD1-214ENST00000556771 SERPINB11Q96P15 392 aa11.04□□□□□ -0.64
MTHFD1-214ENST00000556771 CPXM1Q96SM3 734 aa11.04□□□□□ -0.64
MTHFD1-214ENST00000556771 NUP58Q9BVL2 599 aa11.04□□□□□ -0.64
MTHFD1-214ENST00000556771 LINC00597Q9H2U6 94 aa11.04□□□□□ -0.64
MTHFD1-214ENST00000556771 SYNCQ9H7C4 482 aa11.04□□□□□ -0.64
MTHFD1-214ENST00000556771 TMEM51Q9NW97 253 aa11.04□□□□□ -0.64
MTHFD1-214ENST00000556771 DLGAP2Q9P1A6 1054 aa11.04□□□□□ -0.64
MTHFD1-214ENST00000556771 NOCTQ9UK39 431 aaKnown RBP11.04□□□□□ -0.64
MTHFD1-214ENST00000556771 NUDT5Q9UKK9 219 aa11.04□□□□□ -0.64
MTHFD1-214ENST00000556771 NDRG2Q9UN36 371 aaKnown RBP11.04□□□□□ -0.64
MTHFD1-214ENST00000556771 SLC12A8A0AV02 714 aa11.03□□□□□ -0.64
MTHFD1-214ENST00000556771 OTOL1A6NHN0 477 aaPredicted RBP11.03□□□□□ -0.64
MTHFD1-214ENST00000556771 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.03□□□□□ -0.64
MTHFD1-214ENST00000556771 PIK3R2O00459 728 aa11.03□□□□□ -0.64
MTHFD1-214ENST00000556771 MDM4O15151 490 aa11.03□□□□□ -0.64
MTHFD1-214ENST00000556771 PAPSS1O43252 624 aaPredicted RBP11.03□□□□□ -0.64
MTHFD1-214ENST00000556771 PI15O43692 258 aa11.03□□□□□ -0.64
MTHFD1-214ENST00000556771 GREM1O60565 184 aa11.03□□□□□ -0.64
MTHFD1-214ENST00000556771 HSF2BPO75031 334 aa11.03□□□□□ -0.64
MTHFD1-214ENST00000556771 DCNP07585 359 aaKnown RBP11.03□□□□□ -0.64
MTHFD1-214ENST00000556771 ADH5P11766 374 aa11.03□□□□□ -0.64
MTHFD1-214ENST00000556771 NCAM1P13591 858 aa11.03□□□□□ -0.64
MTHFD1-214ENST00000556771 DRD1P21728 446 aa11.03□□□□□ -0.64
MTHFD1-214ENST00000556771 CHKAP35790 457 aa11.03□□□□□ -0.64
MTHFD1-214ENST00000556771 GABRB2P47870 512 aa11.03□□□□□ -0.64
MTHFD1-214ENST00000556771 ZNF445P59923 1031 aa11.03□□□□□ -0.64
MTHFD1-214ENST00000556771 YWHAZP63104 245 aaKnown RBP11.03□□□□□ -0.64
MTHFD1-214ENST00000556771 GAD2Q05329 585 aa11.03□□□□□ -0.64
MTHFD1-214ENST00000556771 MTA1Q13330 715 aa11.03□□□□□ -0.64
MTHFD1-214ENST00000556771 FBXO43Q4G163 708 aa11.03□□□□□ -0.64
MTHFD1-214ENST00000556771 TMEM196Q5HYL7 178 aa11.03□□□□□ -0.64
MTHFD1-214ENST00000556771 NUGGCQ68CJ6 796 aa11.03□□□□□ -0.64
MTHFD1-214ENST00000556771 MAMSTRQ6ZN01 415 aa11.03□□□□□ -0.64
MTHFD1-214ENST00000556771 SLC26A9Q7LBE3 791 aa11.03□□□□□ -0.64
MTHFD1-214ENST00000556771 NOP9Q86U38 636 aaKnown RBP11.03□□□□□ -0.64
MTHFD1-214ENST00000556771 ERICH1Q86X53 443 aa11.03□□□□□ -0.64
MTHFD1-214ENST00000556771 UNC45BQ8IWX7 931 aa11.03□□□□□ -0.64
MTHFD1-214ENST00000556771 ZNF397Q8NF99 534 aaPredicted RBP11.03□□□□□ -0.64
MTHFD1-214ENST00000556771 TTC8Q8TAM2 541 aa11.03□□□□□ -0.64
MTHFD1-214ENST00000556771 CD101Q93033 1021 aa11.03□□□□□ -0.64
MTHFD1-214ENST00000556771 NAP1L5Q96NT1 182 aaPredicted RBP11.03□□□□□ -0.64
MTHFD1-214ENST00000556771 P2RY13Q9BPV8 354 aa11.03□□□□□ -0.64
MTHFD1-214ENST00000556771 IRX2Q9BZI1 471 aaPredicted RBP11.03□□□□□ -0.64
MTHFD1-214ENST00000556771 NUCKS1Q9H1E3 243 aaKnown RBP11.03□□□□□ -0.64
MTHFD1-214ENST00000556771 CHRDQ9H2X0 955 aa11.03□□□□□ -0.64
MTHFD1-214ENST00000556771 POPDC2Q9HBU9 364 aa11.03□□□□□ -0.64
MTHFD1-214ENST00000556771 SPHK2Q9NRA0 654 aa11.03□□□□□ -0.64
MTHFD1-214ENST00000556771 WDR35Q9P2L0 1181 aa11.03□□□□□ -0.64
MTHFD1-214ENST00000556771 CAPN9O14815 690 aa11.02□□□□□ -0.65
MTHFD1-214ENST00000556771 CBFA2T2O43439 604 aa11.02□□□□□ -0.65
MTHFD1-214ENST00000556771 CYP1A1P04798 512 aaPredicted RBP11.02□□□□□ -0.65
MTHFD1-214ENST00000556771 MMEP08473 750 aa11.02□□□□□ -0.65
MTHFD1-214ENST00000556771 CHRNB1P11230 501 aa11.02□□□□□ -0.65
MTHFD1-214ENST00000556771 CORO1AP31146 461 aaKnown RBP11.02□□□□□ -0.65
MTHFD1-214ENST00000556771 PTPN5P54829 565 aa11.02□□□□□ -0.65
MTHFD1-214ENST00000556771 NOMO3P69849 1222 aa11.02□□□□□ -0.65
MTHFD1-214ENST00000556771 FZD5Q13467 585 aa11.02□□□□□ -0.65
MTHFD1-214ENST00000556771 CCINQ13939 588 aa11.02□□□□□ -0.65
MTHFD1-214ENST00000556771 PON2Q15165 354 aa11.02□□□□□ -0.65
MTHFD1-214ENST00000556771 PTPN20Q4JDL3 420 aa11.02□□□□□ -0.65
MTHFD1-214ENST00000556771 LY6G5CQ5SRR4 150 aa11.02□□□□□ -0.65
MTHFD1-214ENST00000556771 TAF3Q5VWG9 929 aa11.02□□□□□ -0.65
MTHFD1-214ENST00000556771 OR6B2Q6IFH4 312 aa11.02□□□□□ -0.65
MTHFD1-214ENST00000556771 PPP1R2P3Q6NXS1 205 aa11.02□□□□□ -0.65
MTHFD1-214ENST00000556771 RHBDF2Q6PJF5 856 aa11.02□□□□□ -0.65
MTHFD1-214ENST00000556771 TXNDC11Q6PKC3 985 aa11.02□□□□□ -0.65
MTHFD1-214ENST00000556771 OLFML1Q6UWY5 402 aa11.02□□□□□ -0.65
MTHFD1-214ENST00000556771 NUDT18Q6ZVK8 323 aa11.02□□□□□ -0.65
MTHFD1-214ENST00000556771 CPXM2Q8N436 756 aa11.02□□□□□ -0.65
MTHFD1-214ENST00000556771 CLEC4CQ8WTT0 213 aa11.02□□□□□ -0.65
MTHFD1-214ENST00000556771 C18orf8Q96DM3 657 aa11.02□□□□□ -0.65
MTHFD1-214ENST00000556771 LMAN1LQ9HAT1 526 aa11.02□□□□□ -0.65
MTHFD1-214ENST00000556771 RRN3Q9NYV6 651 aa11.02□□□□□ -0.65
MTHFD1-214ENST00000556771 MARK1Q9P0L2 795 aa11.02□□□□□ -0.65
MTHFD1-214ENST00000556771 TLR6Q9Y2C9 796 aa11.02□□□□□ -0.65
MTHFD1-214ENST00000556771 MTF2Q9Y483 593 aaPredicted RBP11.02□□□□□ -0.65
MTHFD1-214ENST00000556771 COL4A3Q01955 1670 aa11.01□□□□□ -0.65
MTHFD1-214ENST00000556771 A0A1W2PQJ5 194 aa11.01□□□□□ -0.65
MTHFD1-214ENST00000556771 DAB1O75553 588 aa11.01□□□□□ -0.65
MTHFD1-214ENST00000556771 IGLV3-27P01718 113 aa11.01□□□□□ -0.65
MTHFD1-214ENST00000556771 KLKB1P03952 638 aa11.01□□□□□ -0.65
MTHFD1-214ENST00000556771 ERBB2P04626 1255 aa11.01□□□□□ -0.65
MTHFD1-214ENST00000556771 CYBBP04839 570 aa11.01□□□□□ -0.65
MTHFD1-214ENST00000556771 FYNP06241 537 aa11.01□□□□□ -0.65
MTHFD1-214ENST00000556771 HMBSP08397 361 aa11.01□□□□□ -0.65
MTHFD1-214ENST00000556771 SLC2A3P11169 496 aa11.01□□□□□ -0.65
MTHFD1-214ENST00000556771 PBX1P40424 430 aa11.01□□□□□ -0.65
MTHFD1-214ENST00000556771 OPRD1P41143 372 aa11.01□□□□□ -0.65
MTHFD1-214ENST00000556771 SLC11A2P49281 568 aa11.01□□□□□ -0.65
MTHFD1-214ENST00000556771 TBX4P57082 545 aa11.01□□□□□ -0.65
MTHFD1-214ENST00000556771 CDK17Q00537 523 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms