RNA–Protein interactions for RNA: ENST00000556296.1

APEX1-213, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 4

Gene APEX1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-213ENST00000556296 ANP32BQ92688 251 aaKnown RBP13.4□□□□□ -0.26
APEX1-213ENST00000556296 TWNKQ96RR1 684 aa13.4□□□□□ -0.26
APEX1-213ENST00000556296 SLC22A12Q96S37 553 aa13.4□□□□□ -0.26
APEX1-213ENST00000556296 PNKPQ96T60 521 aa13.4□□□□□ -0.26
APEX1-213ENST00000556296 TTLL2Q9BWV7 592 aa13.4□□□□□ -0.26
APEX1-213ENST00000556296 NUCKS1Q9H1E3 243 aaKnown RBP13.4□□□□□ -0.26
APEX1-213ENST00000556296 LINC00597Q9H2U6 94 aa13.4□□□□□ -0.26
APEX1-213ENST00000556296 DPEP3Q9H4B8 488 aa13.4□□□□□ -0.26
APEX1-213ENST00000556296 KIAA1257Q9ULG3 409 aa13.4□□□□□ -0.26
APEX1-213ENST00000556296 MMP17Q9ULZ9 603 aa13.4□□□□□ -0.26
APEX1-213ENST00000556296 CAPN11Q9UMQ6 739 aa13.4□□□□□ -0.26
APEX1-213ENST00000556296 TPRP12270 2363 aaKnown RBP13.4□□□□□ -0.26
APEX1-213ENST00000556296 RTN3O95197 1032 aaPredicted RBP13.39□□□□□ -0.27
APEX1-213ENST00000556296 GYPCP04921 128 aa13.39□□□□□ -0.27
APEX1-213ENST00000556296 CCDC172P0C7W6 258 aa13.39□□□□□ -0.27
APEX1-213ENST00000556296 CD19P15391 556 aa13.39□□□□□ -0.27
APEX1-213ENST00000556296 NOVA1P51513 510 aaKnown RBP13.39□□□□□ -0.27
APEX1-213ENST00000556296 ZNF132P52740 706 aa13.39□□□□□ -0.27
APEX1-213ENST00000556296 ZBED6P86452 979 aa13.39□□□□□ -0.27
APEX1-213ENST00000556296 PTK2Q05397 1052 aa13.39□□□□□ -0.27
APEX1-213ENST00000556296 LMAN2Q12907 356 aa13.39□□□□□ -0.27
APEX1-213ENST00000556296 ORC1Q13415 861 aa13.39□□□□□ -0.27
APEX1-213ENST00000556296 CRY1Q16526 586 aa13.39□□□□□ -0.27
APEX1-213ENST00000556296 MDH1BQ5I0G3 518 aa13.39□□□□□ -0.27
APEX1-213ENST00000556296 BTBD8Q5XKL5 378 aa13.39□□□□□ -0.27
APEX1-213ENST00000556296 PMS2CLQ68D20 193 aa13.39□□□□□ -0.27
APEX1-213ENST00000556296 TRMT11Q7Z4G4 463 aaKnown RBP13.39□□□□□ -0.27
APEX1-213ENST00000556296 SLC4A11Q8NBS3 891 aa13.39□□□□□ -0.27
APEX1-213ENST00000556296 CPLX3Q8WVH0 158 aa13.39□□□□□ -0.27
APEX1-213ENST00000556296 OVCA2Q8WZ82 227 aa13.39□□□□□ -0.27
APEX1-213ENST00000556296 BAP1Q92560 729 aa13.39□□□□□ -0.27
APEX1-213ENST00000556296 OTUB2Q96DC9 234 aa13.39□□□□□ -0.27
APEX1-213ENST00000556296 PCED1BQ96HM7 432 aa13.39□□□□□ -0.27
APEX1-213ENST00000556296 HEXIM2Q96MH2 286 aaKnown RBP13.39□□□□□ -0.27
APEX1-213ENST00000556296 TMEM9BQ9NQ34 198 aa13.39□□□□□ -0.27
APEX1-213ENST00000556296 BCCIPQ9P287 314 aaKnown RBP eCLIP13.39□□□□□ -0.27
APEX1-213ENST00000556296 LUC7L2Q9Y383 392 aaKnown RBP13.39□□□□□ -0.27
APEX1-213ENST00000556296 CPQQ9Y646 472 aa13.39□□□□□ -0.27
APEX1-213ENST00000556296 MYH10P35580 1976 aa13.39□□□□□ -0.27
APEX1-213ENST00000556296 MYOFQ9NZM1 2061 aa13.39□□□□□ -0.27
APEX1-213ENST00000556296 ACACBO00763 2458 aa13.38□□□□□ -0.27
APEX1-213ENST00000556296 SPTBN2O15020 2390 aa13.38□□□□□ -0.27
APEX1-213ENST00000556296 LRRC53A6NM62 1247 aa13.38□□□□□ -0.27
APEX1-213ENST00000556296 C4orf47A7E2U8 309 aa13.38□□□□□ -0.27
APEX1-213ENST00000556296 GOLGA6L6A8MZA4 724 aa13.38□□□□□ -0.27
APEX1-213ENST00000556296 F8VP50 259 aa13.38□□□□□ -0.27
APEX1-213ENST00000556296 K7EQS6 105 aa13.38□□□□□ -0.27
APEX1-213ENST00000556296 DCLK1O15075 740 aa13.38□□□□□ -0.27
APEX1-213ENST00000556296 CYP26A1O43174 497 aa13.38□□□□□ -0.27
APEX1-213ENST00000556296 MBL2P11226 248 aaPredicted RBP13.38□□□□□ -0.27
APEX1-213ENST00000556296 VDRP11473 427 aa13.38□□□□□ -0.27
APEX1-213ENST00000556296 FERP16591 822 aa13.38□□□□□ -0.27
APEX1-213ENST00000556296 YWHAQP27348 245 aa13.38□□□□□ -0.27
APEX1-213ENST00000556296 HOXC13P31276 330 aa13.38□□□□□ -0.27
APEX1-213ENST00000556296 CASP14P31944 242 aa13.38□□□□□ -0.27
APEX1-213ENST00000556296 GRIA2P42262 883 aa13.38□□□□□ -0.27
APEX1-213ENST00000556296 TNFRSF4P43489 277 aa13.38□□□□□ -0.27
APEX1-213ENST00000556296 TAF10Q12962 218 aa13.38□□□□□ -0.27
APEX1-213ENST00000556296 DHCR24Q15392 516 aa13.38□□□□□ -0.27
APEX1-213ENST00000556296 SGO2Q562F6 1265 aa13.38□□□□□ -0.27
APEX1-213ENST00000556296 SFMBT2Q5VUG0 894 aa13.38□□□□□ -0.27
APEX1-213ENST00000556296 PSAPL1Q6NUJ1 521 aa13.38□□□□□ -0.27
APEX1-213ENST00000556296 RASSF3Q86WH2 238 aa13.38□□□□□ -0.27
APEX1-213ENST00000556296 ADGRG2Q8IZP9 1017 aa13.38□□□□□ -0.27
APEX1-213ENST00000556296 NUP93Q8N1F7 819 aa13.38□□□□□ -0.27
APEX1-213ENST00000556296 KCNV2Q8TDN2 545 aa13.38□□□□□ -0.27
APEX1-213ENST00000556296 NUSAP1Q9BXS6 441 aaKnown RBP13.38□□□□□ -0.27
APEX1-213ENST00000556296 NACA2Q9H009 215 aa13.38□□□□□ -0.27
APEX1-213ENST00000556296 SMOC1Q9H4F8 434 aa13.38□□□□□ -0.27
APEX1-213ENST00000556296 RXFP3Q9NSD7 469 aa13.38□□□□□ -0.27
APEX1-213ENST00000556296 POLR3BQ9NW08 1133 aaPredicted RBP13.38□□□□□ -0.27
APEX1-213ENST00000556296 SMPD4Q9NXE4 827 aa13.38□□□□□ -0.27
APEX1-213ENST00000556296 SH3BP1Q9Y3L3 701 aa13.38□□□□□ -0.27
APEX1-213ENST00000556296 CACNA1BQ00975 2339 aa13.38□□□□□ -0.27
APEX1-213ENST00000556296 RNF225M0QZC1 329 aaPredicted RBP13.37□□□□□ -0.27
APEX1-213ENST00000556296 MED7O43513 233 aa13.37□□□□□ -0.27
APEX1-213ENST00000556296 GFPT2O94808 682 aa13.37□□□□□ -0.27
APEX1-213ENST00000556296 PNMA6AP0CW24 399 aaPredicted RBP13.37□□□□□ -0.27
APEX1-213ENST00000556296 GNA15P30679 374 aa13.37□□□□□ -0.27
APEX1-213ENST00000556296 RDXP35241 583 aaKnown RBP13.37□□□□□ -0.27
APEX1-213ENST00000556296 OPRD1P41143 372 aa13.37□□□□□ -0.27
APEX1-213ENST00000556296 DHPSP49366 369 aaPredicted RBP13.37□□□□□ -0.27
APEX1-213ENST00000556296 USP46P62068 366 aa13.37□□□□□ -0.27
APEX1-213ENST00000556296 GAD2Q05329 585 aa13.37□□□□□ -0.27
APEX1-213ENST00000556296 STILQ15468 1287 aa13.37□□□□□ -0.27
APEX1-213ENST00000556296 ASIC2Q16515 512 aa13.37□□□□□ -0.27
APEX1-213ENST00000556296 SPDYCQ5MJ68 293 aa13.37□□□□□ -0.27
APEX1-213ENST00000556296 ARHGAP17Q68EM7 881 aa13.37□□□□□ -0.27
APEX1-213ENST00000556296 NAIF1Q69YI7 327 aaPredicted RBP13.37□□□□□ -0.27
APEX1-213ENST00000556296 CNGA4Q8IV77 575 aa13.37□□□□□ -0.27
APEX1-213ENST00000556296 PGBD3Q8N328 593 aa13.37□□□□□ -0.27
APEX1-213ENST00000556296 CCDC33Q8N5R6 958 aa13.37□□□□□ -0.27
APEX1-213ENST00000556296 SYN2Q92777 582 aaPredicted RBP13.37□□□□□ -0.27
APEX1-213ENST00000556296 EZH1Q92800 747 aaPredicted RBP13.37□□□□□ -0.27
APEX1-213ENST00000556296 FBXO32Q969P5 355 aa13.37□□□□□ -0.27
APEX1-213ENST00000556296 CYFIP2Q96F07 1278 aa13.37□□□□□ -0.27
APEX1-213ENST00000556296 MED10Q9BTT4 135 aa13.37□□□□□ -0.27
APEX1-213ENST00000556296 TPSD1Q9BZJ3 242 aa13.37□□□□□ -0.27
APEX1-213ENST00000556296 SLC32A1Q9H598 525 aa13.37□□□□□ -0.27
APEX1-213ENST00000556296 ARHGEF4Q9NR80 690 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms