RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-223ENST00000555904 HBS1LQ9Y450 684 aaKnown RBP13.05□□□□□ -0.32
ABCD4-223ENST00000555904 NR2E1Q9Y466 385 aa13.05□□□□□ -0.32
ABCD4-223ENST00000555904 SLC12A8A0AV02 714 aa13.04□□□□□ -0.32
ABCD4-223ENST00000555904 RCCD1A6NED2 376 aa13.04□□□□□ -0.32
ABCD4-223ENST00000555904 GRXCR2A6NFK2 248 aa13.04□□□□□ -0.32
ABCD4-223ENST00000555904 MSI1O43347 362 aaKnown RBP13.04□□□□□ -0.32
ABCD4-223ENST00000555904 MOSPD3O75425 235 aa13.04□□□□□ -0.32
ABCD4-223ENST00000555904 OLFM2O95897 454 aa13.04□□□□□ -0.32
ABCD4-223ENST00000555904 TBX18O95935 607 aa13.04□□□□□ -0.32
ABCD4-223ENST00000555904 APOEP02649 317 aa13.04□□□□□ -0.32
ABCD4-223ENST00000555904 CCR1P32246 355 aa13.04□□□□□ -0.32
ABCD4-223ENST00000555904 RDXP35241 583 aaKnown RBP13.04□□□□□ -0.32
ABCD4-223ENST00000555904 SSR1P43307 286 aaKnown RBP13.04□□□□□ -0.32
ABCD4-223ENST00000555904 HARS2P49590 506 aaKnown RBP13.04□□□□□ -0.32
ABCD4-223ENST00000555904 HADHBP55084 474 aaKnown RBP13.04□□□□□ -0.32
ABCD4-223ENST00000555904 TBX4P57082 545 aa13.04□□□□□ -0.32
ABCD4-223ENST00000555904 SLC7A9P82251 487 aa13.04□□□□□ -0.32
ABCD4-223ENST00000555904 MTA1Q13330 715 aa13.04□□□□□ -0.32
ABCD4-223ENST00000555904 TRIP4Q15650 581 aaPredicted RBP13.04□□□□□ -0.32
ABCD4-223ENST00000555904 ARL13BQ3SXY8 428 aa13.04□□□□□ -0.32
ABCD4-223ENST00000555904 CCDC14Q49A88 953 aa13.04□□□□□ -0.32
ABCD4-223ENST00000555904 PTCRAQ6ISU1 281 aaPredicted RBP13.04□□□□□ -0.32
ABCD4-223ENST00000555904 ZNF662Q6ZS27 426 aa13.04□□□□□ -0.32
ABCD4-223ENST00000555904 STRADAQ7RTN6 431 aa13.04□□□□□ -0.32
ABCD4-223ENST00000555904 TAC4Q86UU9 113 aa13.04□□□□□ -0.32
ABCD4-223ENST00000555904 SYCE1Q8N0S2 351 aa13.04□□□□□ -0.32
ABCD4-223ENST00000555904 RNF10Q8N5U6 811 aaKnown RBP13.04□□□□□ -0.32
ABCD4-223ENST00000555904 TDRD5Q8NAT2 981 aaKnown RBP13.04□□□□□ -0.32
ABCD4-223ENST00000555904 FAM172AQ8WUF8 416 aa13.04□□□□□ -0.32
ABCD4-223ENST00000555904 SMARCD2Q92925 531 aa13.04□□□□□ -0.32
ABCD4-223ENST00000555904 KHSRPQ92945 711 aaKnown RBP eCLIP13.04□□□□□ -0.32
ABCD4-223ENST00000555904 PLD4Q96BZ4 506 aa13.04□□□□□ -0.32
ABCD4-223ENST00000555904 ALS2CR12Q96Q35 445 aa13.04□□□□□ -0.32
ABCD4-223ENST00000555904 CYP2S1Q96SQ9 504 aa13.04□□□□□ -0.32
ABCD4-223ENST00000555904 TBCBQ99426 244 aa13.04□□□□□ -0.32
ABCD4-223ENST00000555904 OSGEPQ9NPF4 335 aa13.04□□□□□ -0.32
ABCD4-223ENST00000555904 TDP1Q9NUW8 608 aa13.04□□□□□ -0.32
ABCD4-223ENST00000555904 SFMBT1Q9UHJ3 866 aa13.04□□□□□ -0.32
ABCD4-223ENST00000555904 SLC12A6Q9UHW9 1150 aa13.04□□□□□ -0.32
ABCD4-223ENST00000555904 LSM7Q9UK45 103 aaKnown RBP13.04□□□□□ -0.32
ABCD4-223ENST00000555904 GUCA1BQ9UMX6 200 aa13.04□□□□□ -0.32
ABCD4-223ENST00000555904 ARHGAP26Q9UNA1 814 aa13.04□□□□□ -0.32
ABCD4-223ENST00000555904 USTQ9Y2C2 406 aa13.04□□□□□ -0.32
ABCD4-223ENST00000555904 CPQQ9Y646 472 aa13.04□□□□□ -0.32
ABCD4-223ENST00000555904 MYO7AQ13402 2215 aa13.04□□□□□ -0.32
ABCD4-223ENST00000555904 TMEM110-MUSTN1A8MSY1 372 aa13.03□□□□□ -0.32
ABCD4-223ENST00000555904 MDM4O15151 490 aa13.03□□□□□ -0.32
ABCD4-223ENST00000555904 IRAK2O43187 625 aa13.03□□□□□ -0.32
ABCD4-223ENST00000555904 BUB1O43683 1085 aa13.03□□□□□ -0.32
ABCD4-223ENST00000555904 MSNP26038 577 aaKnown RBP13.03□□□□□ -0.32
ABCD4-223ENST00000555904 MAN1A1P33908 653 aa13.03□□□□□ -0.32
ABCD4-223ENST00000555904 MESDQ14696 234 aa13.03□□□□□ -0.32
ABCD4-223ENST00000555904 C15orf59Q2T9L4 293 aaPredicted RBP13.03□□□□□ -0.32
ABCD4-223ENST00000555904 NUGGCQ68CJ6 796 aa13.03□□□□□ -0.32
ABCD4-223ENST00000555904 MTSS1LQ765P7 747 aa13.03□□□□□ -0.32
ABCD4-223ENST00000555904 DAAM2Q86T65 1068 aa13.03□□□□□ -0.32
ABCD4-223ENST00000555904 ARID3BQ8IVW6 561 aaPredicted RBP13.03□□□□□ -0.32
ABCD4-223ENST00000555904 UNC45BQ8IWX7 931 aa13.03□□□□□ -0.32
ABCD4-223ENST00000555904 CELF5Q8N6W0 485 aaKnown RBP13.03□□□□□ -0.32
ABCD4-223ENST00000555904 NIPA2Q8N8Q9 360 aa13.03□□□□□ -0.32
ABCD4-223ENST00000555904 NT5C3BQ969T7 300 aa13.03□□□□□ -0.32
ABCD4-223ENST00000555904 E2F7Q96AV8 911 aa13.03□□□□□ -0.32
ABCD4-223ENST00000555904 PGAP3Q96FM1 320 aaPredicted RBP13.03□□□□□ -0.32
ABCD4-223ENST00000555904 SLC22A12Q96S37 553 aa13.03□□□□□ -0.32
ABCD4-223ENST00000555904 PHF7Q9BWX1 381 aaPredicted RBP13.03□□□□□ -0.32
ABCD4-223ENST00000555904 TRIM7Q9C029 511 aa13.03□□□□□ -0.32
ABCD4-223ENST00000555904 RNF38Q9H0F5 515 aa13.03□□□□□ -0.32
ABCD4-223ENST00000555904 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.03□□□□□ -0.32
ABCD4-223ENST00000555904 PYCARDQ9ULZ3 195 aa13.03□□□□□ -0.32
ABCD4-223ENST00000555904 SH3BP1Q9Y3L3 701 aa13.03□□□□□ -0.32
ABCD4-223ENST00000555904 DUSP10Q9Y6W6 482 aa13.03□□□□□ -0.32
ABCD4-223ENST00000555904 GREB1Q4ZG55 1949 aa13.03□□□□□ -0.32
ABCD4-223ENST00000555904 SPOPO43791 374 aa13.02□□□□□ -0.33
ABCD4-223ENST00000555904 PRPSAP2O60256 369 aa13.02□□□□□ -0.33
ABCD4-223ENST00000555904 PROSCO94903 275 aa13.02□□□□□ -0.33
ABCD4-223ENST00000555904 HMBSP08397 361 aa13.02□□□□□ -0.33
ABCD4-223ENST00000555904 IRF1P10914 325 aa13.02□□□□□ -0.33
ABCD4-223ENST00000555904 LAMP2P13473 410 aa13.02□□□□□ -0.33
ABCD4-223ENST00000555904 SP100P23497 879 aaPredicted RBP13.02□□□□□ -0.33
ABCD4-223ENST00000555904 WEE1P30291 646 aa13.02□□□□□ -0.33
ABCD4-223ENST00000555904 SLC1A1P43005 524 aa13.02□□□□□ -0.33
ABCD4-223ENST00000555904 OGDHQ02218 1023 aa13.02□□□□□ -0.33
ABCD4-223ENST00000555904 RING1Q06587 406 aa13.02□□□□□ -0.33
ABCD4-223ENST00000555904 SMAD2Q15796 467 aaKnown RBP13.02□□□□□ -0.33
ABCD4-223ENST00000555904 HADHQ16836 314 aaKnown RBP13.02□□□□□ -0.33
ABCD4-223ENST00000555904 FAM78AQ5JUQ0 283 aa13.02□□□□□ -0.33
ABCD4-223ENST00000555904 BRMS1LQ5PSV4 323 aa13.02□□□□□ -0.33
ABCD4-223ENST00000555904 TRNP1Q6NT89 227 aa13.02□□□□□ -0.33
ABCD4-223ENST00000555904 C11orf63Q6NUN7 778 aa13.02□□□□□ -0.33
ABCD4-223ENST00000555904 CC2D1AQ6P1N0 951 aaPredicted RBP13.02□□□□□ -0.33
ABCD4-223ENST00000555904 SCYL2Q6P3W7 929 aa13.02□□□□□ -0.33
ABCD4-223ENST00000555904 PLCD3Q8N3E9 789 aa13.02□□□□□ -0.33
ABCD4-223ENST00000555904 USP13Q92995 863 aaPredicted RBP13.02□□□□□ -0.33
ABCD4-223ENST00000555904 BTBD6Q96KE9 485 aa13.02□□□□□ -0.33
ABCD4-223ENST00000555904 ZSWIM3Q96MP5 696 aa13.02□□□□□ -0.33
ABCD4-223ENST00000555904 ASB16Q96NS5 453 aa13.02□□□□□ -0.33
ABCD4-223ENST00000555904 DCLK3Q9C098 648 aa13.02□□□□□ -0.33
ABCD4-223ENST00000555904 SMG9Q9H0W8 520 aaKnown RBP13.02□□□□□ -0.33
ABCD4-223ENST00000555904 WDCPQ9H6R7 721 aa13.02□□□□□ -0.33
ABCD4-223ENST00000555904 ZFP14Q9HCL3 533 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms